RNA–Protein interactions for RNA: ENST00000460264.5

COL5A1-203, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 913 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-203ENST00000460264 CFAP70Q5T0N1 1121 aa27.75■■■□□ 2.03
COL5A1-203ENST00000460264 WAPLQ7Z5K2 1190 aa27.74■■■□□ 2.03
COL5A1-203ENST00000460264 DDX17Q92841 729 aaKnown RBP27.73■■■□□ 2.03
COL5A1-203ENST00000460264 ADGRB1O14514 1584 aa27.72■■■□□ 2.03
COL5A1-203ENST00000460264 FMN2Q9NZ56 1722 aa27.72■■■□□ 2.03
COL5A1-203ENST00000460264 DHX57Q6P158 1386 aaKnown RBP27.72■■■□□ 2.03
COL5A1-203ENST00000460264 ORAI2Q96SN7 254 aa27.7■■■□□ 2.02
COL5A1-203ENST00000460264 DLC1Q96QB1 1528 aa27.68■■■□□ 2.02
COL5A1-203ENST00000460264 DCAF11Q8TEB1 546 aa27.68■■■□□ 2.02
COL5A1-203ENST00000460264 SIRT1Q96EB6 747 aa27.68■■■□□ 2.02
COL5A1-203ENST00000460264 LRRC59Q96AG4 307 aaKnown RBP27.66■■■□□ 2.02
COL5A1-203ENST00000460264 KDM2AQ9Y2K7 1162 aa27.66■■■□□ 2.02
COL5A1-203ENST00000460264 PNPLA6Q8IY17 1366 aa27.65■■■□□ 2.02
COL5A1-203ENST00000460264 STAC3Q96MF2 364 aa27.64■■■□□ 2.02
COL5A1-203ENST00000460264 SOS2Q07890 1332 aaPredicted RBP27.64■■■□□ 2.01
COL5A1-203ENST00000460264 POTEAQ6S8J7 498 aa27.63■■■□□ 2.01
COL5A1-203ENST00000460264 MEX3CQ5U5Q3 659 aaKnown RBP27.61■■■□□ 2.01
COL5A1-203ENST00000460264 KIF1AQ12756 1690 aa27.61■■■□□ 2.01
COL5A1-203ENST00000460264 RGPD8O14715 1765 aaPredicted RBP27.6■■■□□ 2.01
COL5A1-203ENST00000460264 ESCO1Q5FWF5 840 aa27.6■■■□□ 2.01
COL5A1-203ENST00000460264 PRAM1Q96QH2 718 aa27.6■■■□□ 2.01
COL5A1-203ENST00000460264 PXDNQ92626 1479 aa27.59■■■□□ 2.01
COL5A1-203ENST00000460264 NUTM2BA6NNL0 878 aaPredicted RBP27.59■■■□□ 2.01
COL5A1-203ENST00000460264 NUTM2EB1AL46 878 aaPredicted RBP27.59■■■□□ 2.01
COL5A1-203ENST00000460264 NUTM2AQ8IVF1 878 aaPredicted RBP27.59■■■□□ 2.01
COL5A1-203ENST00000460264 ADGRB2O60241 1585 aa27.59■■■□□ 2.01
COL5A1-203ENST00000460264 NUTM2FA1L443 756 aa27.58■■■□□ 2.01
COL5A1-203ENST00000460264 COL22A1Q8NFW1 1626 aaPredicted RBP27.57■■■□□ 2
COL5A1-203ENST00000460264 NPHP3Q7Z494 1330 aa27.57■■■□□ 2
COL5A1-203ENST00000460264 ARHGEF28Q8N1W1 1705 aaKnown RBP27.56■■■□□ 2
COL5A1-203ENST00000460264 KIAA1210Q9ULL0 1709 aa27.55■■■□□ 2
COL5A1-203ENST00000460264 SAFB2Q14151 953 aaKnown RBP eCLIP27.55■■■□□ 2
COL5A1-203ENST00000460264 POGKQ9P215 609 aa27.53■■■□□ 2
COL5A1-203ENST00000460264 TRAK1Q9UPV9 953 aa27.53■■■□□ 2
COL5A1-203ENST00000460264 USP32Q8NFA0 1604 aa27.52■■■□□ 2
COL5A1-203ENST00000460264 FOXO3O43524 673 aa27.52■■■□□ 2
COL5A1-203ENST00000460264 ZNF772Q68DY9 489 aaPredicted RBP27.49■■□□□ 1.99
COL5A1-203ENST00000460264 XPCQ01831 940 aaPredicted RBP27.48■■□□□ 1.99
COL5A1-203ENST00000460264 ANKARQ7Z5J8 1434 aa27.47■■□□□ 1.99
COL5A1-203ENST00000460264 AFF2P51816 1311 aa27.45■■□□□ 1.99
COL5A1-203ENST00000460264 MARF1Q9Y4F3 1742 aaKnown RBP27.44■■□□□ 1.98
COL5A1-203ENST00000460264 C8orf37Q96NL8 207 aa27.44■■□□□ 1.98
COL5A1-203ENST00000460264 MINK1Q8N4C8 1332 aaPredicted RBP27.43■■□□□ 1.98
COL5A1-203ENST00000460264 TULP4Q9NRJ4 1543 aa27.43■■□□□ 1.98
COL5A1-203ENST00000460264 HIRIP3Q9BW71 556 aaPredicted RBP27.43■■□□□ 1.98
COL5A1-203ENST00000460264 PHF8Q9UPP1 1060 aa27.43■■□□□ 1.98
COL5A1-203ENST00000460264 ADAMTS2O95450 1211 aa27.41■■□□□ 1.98
COL5A1-203ENST00000460264 EIF3AQ14152 1382 aaKnown RBP27.4■■□□□ 1.98
COL5A1-203ENST00000460264 SPATA31A3Q5VYP0 1347 aa27.38■■□□□ 1.97
COL5A1-203ENST00000460264 ITSN1Q15811 1721 aa27.37■■□□□ 1.97
COL5A1-203ENST00000460264 TNS3Q68CZ2 1445 aa27.37■■□□□ 1.97
COL5A1-203ENST00000460264 KRT28Q7Z3Y7 464 aa27.37■■□□□ 1.97
COL5A1-203ENST00000460264 SIN3AQ96ST3 1273 aa27.37■■□□□ 1.97
COL5A1-203ENST00000460264 WASLO00401 505 aaPredicted RBP27.36■■□□□ 1.97
COL5A1-203ENST00000460264 PRR36Q9H6K5 1346 aa27.36■■□□□ 1.97
COL5A1-203ENST00000460264 NBPF1Q3BBV0 1214 aa27.35■■□□□ 1.97
COL5A1-203ENST00000460264 L3MBTL2Q969R5 705 aa27.35■■□□□ 1.97
COL5A1-203ENST00000460264 NGLY1Q96IV0 654 aa27.35■■□□□ 1.97
COL5A1-203ENST00000460264 TRPM3Q9HCF6 1732 aaPredicted RBP27.35■■□□□ 1.97
COL5A1-203ENST00000460264 TRPM1Q7Z4N2 1603 aa27.34■■□□□ 1.97
COL5A1-203ENST00000460264 ABCA3Q99758 1704 aa27.33■■□□□ 1.97
COL5A1-203ENST00000460264 CDK12Q9NYV4 1490 aaPredicted RBP27.33■■□□□ 1.97
COL5A1-203ENST00000460264 SBNO1A3KN83 1393 aa27.33■■□□□ 1.97
COL5A1-203ENST00000460264 ATP7BP35670 1465 aa27.32■■□□□ 1.96
COL5A1-203ENST00000460264 RXRBP28702 533 aa27.32■■□□□ 1.96
COL5A1-203ENST00000460264 PMFBP1Q8TBY8 1022 aa27.32■■□□□ 1.96
COL5A1-203ENST00000460264 PSME1Q06323 249 aa27.31■■□□□ 1.96
COL5A1-203ENST00000460264 TOPAZ1Q8N9V7 1692 aa27.3■■□□□ 1.96
COL5A1-203ENST00000460264 NEUROD1Q13562 356 aa27.29■■□□□ 1.96
COL5A1-203ENST00000460264 ALS2Q96Q42 1657 aa27.29■■□□□ 1.96
COL5A1-203ENST00000460264 QRICH2Q9H0J4 1663 aa27.29■■□□□ 1.96
COL5A1-203ENST00000460264 FNBP4Q8N3X1 1017 aaPredicted RBP27.28■■□□□ 1.96
COL5A1-203ENST00000460264 QTRT2Q9H974 415 aaKnown RBP27.28■■□□□ 1.96
COL5A1-203ENST00000460264 TRIM26Q12899 539 aaPredicted RBP27.27■■□□□ 1.96
COL5A1-203ENST00000460264 ARHGEF10O15013 1369 aa27.26■■□□□ 1.95
COL5A1-203ENST00000460264 USP21Q9UK80 565 aa27.26■■□□□ 1.95
COL5A1-203ENST00000460264 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.26■■□□□ 1.95
COL5A1-203ENST00000460264 RBM6P78332 1123 aaKnown RBP27.24■■□□□ 1.95
COL5A1-203ENST00000460264 RGS12O14924 1447 aa27.24■■□□□ 1.95
COL5A1-203ENST00000460264 GPRASP1Q5JY77 1395 aa27.23■■□□□ 1.95
COL5A1-203ENST00000460264 BCL9LQ86UU0 1499 aa27.23■■□□□ 1.95
COL5A1-203ENST00000460264 ATRNO75882 1429 aa27.23■■□□□ 1.95
COL5A1-203ENST00000460264 NUDT16Q96DE0 195 aaKnown RBP27.22■■□□□ 1.95
COL5A1-203ENST00000460264 CDK19Q9BWU1 502 aa27.22■■□□□ 1.95
COL5A1-203ENST00000460264 CENPJQ9HC77 1338 aaPredicted RBP27.21■■□□□ 1.95
COL5A1-203ENST00000460264 PLCH1Q4KWH8 1693 aa27.21■■□□□ 1.95
COL5A1-203ENST00000460264 LMOD2Q6P5Q4 547 aa27.2■■□□□ 1.94
COL5A1-203ENST00000460264 TRPC5Q9UL62 973 aaPredicted RBP27.2■■□□□ 1.94
COL5A1-203ENST00000460264 CRYBG1Q9Y4K1 1723 aa27.2■■□□□ 1.94
COL5A1-203ENST00000460264 NGDNQ8NEJ9 315 aaKnown RBP27.19■■□□□ 1.94
COL5A1-203ENST00000460264 CABLES1Q8TDN4 633 aa27.19■■□□□ 1.94
COL5A1-203ENST00000460264 SLIT2O94813 1529 aa27.19■■□□□ 1.94
COL5A1-203ENST00000460264 NWD2Q9ULI1 1742 aa27.17■■□□□ 1.94
COL5A1-203ENST00000460264 HAP1P54257 671 aaPredicted RBP27.17■■□□□ 1.94
COL5A1-203ENST00000460264 ROCK2O75116 1388 aaKnown RBP27.16■■□□□ 1.94
COL5A1-203ENST00000460264 POLR3AO14802 1390 aaPredicted RBP27.15■■□□□ 1.94
COL5A1-203ENST00000460264 PLEKHG5O94827 1062 aa27.15■■□□□ 1.94
COL5A1-203ENST00000460264 CCDC61Q9Y6R9 512 aa27.13■■□□□ 1.93
COL5A1-203ENST00000460264 NBPF8Q3BBV2 869 aa27.11■■□□□ 1.93
COL5A1-203ENST00000460264 PAK3O75914 559 aaPredicted RBP27.1■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms