RNA–Protein interactions for RNA: ENST00000460227.4

MECP2-206, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 5

Gene MECP2, Length 1,298 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-206ENST00000460227 TOM1O60784 492 aa18.22■□□□□ 0.51
MECP2-206ENST00000460227 DLC1Q96QB1 1528 aa18.22■□□□□ 0.51
MECP2-206ENST00000460227 MSH6P52701 1360 aa18.21■□□□□ 0.51
MECP2-206ENST00000460227 SAFB2Q14151 953 aaKnown RBP eCLIP18.21■□□□□ 0.51
MECP2-206ENST00000460227 CADPS2Q86UW7 1296 aa18.21■□□□□ 0.51
MECP2-206ENST00000460227 UBAP1LF5GYI3 381 aa18.2■□□□□ 0.5
MECP2-206ENST00000460227 ATF3P18847 181 aa18.2■□□□□ 0.5
MECP2-206ENST00000460227 TRPM1Q7Z4N2 1603 aa18.2■□□□□ 0.5
MECP2-206ENST00000460227 SLAIN2Q9P270 581 aa18.19■□□□□ 0.5
MECP2-206ENST00000460227 ADGRL3Q9HAR2 1447 aa18.18■□□□□ 0.5
MECP2-206ENST00000460227 CENPJQ9HC77 1338 aaPredicted RBP18.18■□□□□ 0.5
MECP2-206ENST00000460227 MINK1Q8N4C8 1332 aaPredicted RBP18.16■□□□□ 0.5
MECP2-206ENST00000460227 HIRIP3Q9BW71 556 aaPredicted RBP18.15■□□□□ 0.5
MECP2-206ENST00000460227 ST20-MTHFSA0A0A6YYL1 179 aa18.14■□□□□ 0.49
MECP2-206ENST00000460227 WASLO00401 505 aaPredicted RBP18.14■□□□□ 0.49
MECP2-206ENST00000460227 KNDC1Q76NI1 1749 aa18.14■□□□□ 0.49
MECP2-206ENST00000460227 DCCP43146 1447 aa18.14■□□□□ 0.49
MECP2-206ENST00000460227 EIF3AQ14152 1382 aaKnown RBP18.13■□□□□ 0.49
MECP2-206ENST00000460227 XIRP1Q702N8 1843 aaKnown RBP18.12■□□□□ 0.49
MECP2-206ENST00000460227 CDK19Q9BWU1 502 aa18.12■□□□□ 0.49
MECP2-206ENST00000460227 PIP4K2BP78356 416 aa18.11■□□□□ 0.49
MECP2-206ENST00000460227 TESK2Q96S53 571 aa18.11■□□□□ 0.49
MECP2-206ENST00000460227 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.11■□□□□ 0.49
MECP2-206ENST00000460227 ZEB1P37275 1124 aaPredicted RBP18.1■□□□□ 0.49
MECP2-206ENST00000460227 USP47Q96K76 1375 aa18.09■□□□□ 0.49
MECP2-206ENST00000460227 SLC24A1O60721 1099 aa18.09■□□□□ 0.49
MECP2-206ENST00000460227 MST1RQ04912 1400 aa18.08■□□□□ 0.49
MECP2-206ENST00000460227 NUTM2FA1L443 756 aa18.08■□□□□ 0.48
MECP2-206ENST00000460227 EIF4G2P78344 907 aaKnown RBP eCLIP18.08■□□□□ 0.48
MECP2-206ENST00000460227 SBNO2Q9Y2G9 1366 aa18.07■□□□□ 0.48
MECP2-206ENST00000460227 BRINP3Q76B58 766 aa18.07■□□□□ 0.48
MECP2-206ENST00000460227 ORAI2Q96SN7 254 aa18.07■□□□□ 0.48
MECP2-206ENST00000460227 C1orf167Q5SNV9 1468 aa18.07■□□□□ 0.48
MECP2-206ENST00000460227 EVC2Q86UK5 1308 aa18.06■□□□□ 0.48
MECP2-206ENST00000460227 HSPA5P11021 654 aaKnown RBP18.06■□□□□ 0.48
MECP2-206ENST00000460227 PRR36Q9H6K5 1346 aa18.05■□□□□ 0.48
MECP2-206ENST00000460227 ESCO1Q5FWF5 840 aa18.05■□□□□ 0.48
MECP2-206ENST00000460227 NUDT16Q96DE0 195 aaKnown RBP18.05■□□□□ 0.48
MECP2-206ENST00000460227 CABP2Q9NPB3 220 aa18.05■□□□□ 0.48
MECP2-206ENST00000460227 ARHGEF28Q8N1W1 1705 aaKnown RBP18.05■□□□□ 0.48
MECP2-206ENST00000460227 PUS7Q96PZ0 661 aaKnown RBP18.04■□□□□ 0.48
MECP2-206ENST00000460227 SRPK2P78362 688 aaKnown RBP18.03■□□□□ 0.48
MECP2-206ENST00000460227 CCDC61Q9Y6R9 512 aa18.03■□□□□ 0.48
MECP2-206ENST00000460227 CDC42BPGQ6DT37 1551 aa18.03■□□□□ 0.48
MECP2-206ENST00000460227 NALCNQ8IZF0 1738 aa18.03■□□□□ 0.48
MECP2-206ENST00000460227 CACNB1Q02641 598 aaPredicted RBP18.02■□□□□ 0.48
MECP2-206ENST00000460227 PHF8Q9UPP1 1060 aa18.01■□□□□ 0.47
MECP2-206ENST00000460227 ADGRB2O60241 1585 aa18■□□□□ 0.47
MECP2-206ENST00000460227 ANKARQ7Z5J8 1434 aa18■□□□□ 0.47
MECP2-206ENST00000460227 PLEKHG3A1L390 1219 aa18■□□□□ 0.47
MECP2-206ENST00000460227 TMF1P82094 1093 aa18■□□□□ 0.47
MECP2-206ENST00000460227 FOXO3O43524 673 aa17.98■□□□□ 0.47
MECP2-206ENST00000460227 PMFBP1Q8TBY8 1022 aa17.98■□□□□ 0.47
MECP2-206ENST00000460227 CABP1Q9NZU7 370 aa17.98■□□□□ 0.47
MECP2-206ENST00000460227 HSPA1LP34931 641 aa17.97■□□□□ 0.47
MECP2-206ENST00000460227 DDX17Q92841 729 aaKnown RBP17.97■□□□□ 0.47
MECP2-206ENST00000460227 TULP4Q9NRJ4 1543 aa17.96■□□□□ 0.47
MECP2-206ENST00000460227 CDCA8Q53HL2 280 aa17.95■□□□□ 0.46
MECP2-206ENST00000460227 C11orf95C9JLR9 678 aaPredicted RBP17.94■□□□□ 0.46
MECP2-206ENST00000460227 SOS2Q07890 1332 aaPredicted RBP17.94■□□□□ 0.46
MECP2-206ENST00000460227 NPHP3Q7Z494 1330 aa17.94■□□□□ 0.46
MECP2-206ENST00000460227 ATP7BP35670 1465 aa17.94■□□□□ 0.46
MECP2-206ENST00000460227 ATAD2Q6PL18 1390 aa17.93■□□□□ 0.46
MECP2-206ENST00000460227 DISP3Q9P2K9 1392 aa17.93■□□□□ 0.46
MECP2-206ENST00000460227 FMN2Q9NZ56 1722 aa17.93■□□□□ 0.46
MECP2-206ENST00000460227 KRT28Q7Z3Y7 464 aa17.93■□□□□ 0.46
MECP2-206ENST00000460227 NGDNQ8NEJ9 315 aaKnown RBP17.93■□□□□ 0.46
MECP2-206ENST00000460227 QRICH2Q9H0J4 1663 aa17.93■□□□□ 0.46
MECP2-206ENST00000460227 PSME1Q06323 249 aa17.92■□□□□ 0.46
MECP2-206ENST00000460227 SLC12A5Q9H2X9 1139 aa17.92■□□□□ 0.46
MECP2-206ENST00000460227 ACEP12821 1306 aa17.92■□□□□ 0.46
MECP2-206ENST00000460227 LRRC59Q96AG4 307 aaKnown RBP17.91■□□□□ 0.46
MECP2-206ENST00000460227 ZNF692Q9BU19 519 aaPredicted RBP17.9■□□□□ 0.46
MECP2-206ENST00000460227 USP32Q8NFA0 1604 aa17.9■□□□□ 0.46
MECP2-206ENST00000460227 POLR3AO14802 1390 aaPredicted RBP17.9■□□□□ 0.46
MECP2-206ENST00000460227 ROBO1Q9Y6N7 1651 aa17.9■□□□□ 0.46
MECP2-206ENST00000460227 PPIP5K1Q6PFW1 1433 aa17.89■□□□□ 0.46
MECP2-206ENST00000460227 XPCQ01831 940 aaPredicted RBP17.89■□□□□ 0.45
MECP2-206ENST00000460227 TMC1Q8TDI8 760 aa17.89■□□□□ 0.45
MECP2-206ENST00000460227 AHDC1Q5TGY3 1603 aaPredicted RBP17.85■□□□□ 0.45
MECP2-206ENST00000460227 SPATA31A3Q5VYP0 1347 aa17.85■□□□□ 0.45
MECP2-206ENST00000460227 SBNO1A3KN83 1393 aa17.84■□□□□ 0.45
MECP2-206ENST00000460227 DCAF8L1A6NGE4 600 aa17.84■□□□□ 0.45
MECP2-206ENST00000460227 TERF2IPQ9NYB0 399 aa17.84■□□□□ 0.45
MECP2-206ENST00000460227 PXDNQ92626 1479 aa17.83■□□□□ 0.45
MECP2-206ENST00000460227 CPSF1Q10570 1443 aaKnown RBP17.83■□□□□ 0.45
MECP2-206ENST00000460227 NINLQ9Y2I6 1382 aa17.83■□□□□ 0.45
MECP2-206ENST00000460227 KIF7Q2M1P5 1343 aa17.83■□□□□ 0.44
MECP2-206ENST00000460227 HDGFL2Q7Z4V5 671 aaPredicted RBP17.83■□□□□ 0.44
MECP2-206ENST00000460227 POLR3GLQ9BT43 218 aa17.82■□□□□ 0.44
MECP2-206ENST00000460227 BRD4O60885 1362 aaPredicted RBP17.81■□□□□ 0.44
MECP2-206ENST00000460227 RGPD8O14715 1765 aaPredicted RBP17.81■□□□□ 0.44
MECP2-206ENST00000460227 JCADQ9P266 1359 aa17.8■□□□□ 0.44
MECP2-206ENST00000460227 PAK3O75914 559 aaPredicted RBP17.8■□□□□ 0.44
MECP2-206ENST00000460227 CD163L1Q9NR16 1453 aa17.8■□□□□ 0.44
MECP2-206ENST00000460227 KIF1AQ12756 1690 aa17.8■□□□□ 0.44
MECP2-206ENST00000460227 SSH2Q76I76 1423 aa17.8■□□□□ 0.44
MECP2-206ENST00000460227 WASHC2AQ641Q2 1341 aa17.79■□□□□ 0.44
MECP2-206ENST00000460227 TTC21BQ7Z4L5 1316 aa17.79■□□□□ 0.44
MECP2-206ENST00000460227 USP6P35125 1406 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms