RNA–Protein interactions for RNA: ENST00000459274.1

RNU1-88P-201, Transcript of RNA, U1 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU1-88P, Length 128 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-88P-201ENST00000459274 AMOTL2Q9Y2J4 779 aa7.92□□□□□ -1.14
RNU1-88P-201ENST00000459274 MINK1Q8N4C8 1332 aaPredicted RBP7.92□□□□□ -1.14
RNU1-88P-201ENST00000459274 ATAD2Q6PL18 1390 aa7.92□□□□□ -1.14
RNU1-88P-201ENST00000459274 PIK3R4Q99570 1358 aa7.92□□□□□ -1.14
RNU1-88P-201ENST00000459274 NINLQ9Y2I6 1382 aa7.92□□□□□ -1.14
RNU1-88P-201ENST00000459274 RALBP1Q15311 655 aa7.91□□□□□ -1.14
RNU1-88P-201ENST00000459274 CHRDL2Q6WN34 429 aa7.91□□□□□ -1.14
RNU1-88P-201ENST00000459274 TESK2Q96S53 571 aa7.91□□□□□ -1.14
RNU1-88P-201ENST00000459274 ARHGAP23Q9P227 1491 aa7.91□□□□□ -1.14
RNU1-88P-201ENST00000459274 DLC1Q96QB1 1528 aa7.9□□□□□ -1.14
RNU1-88P-201ENST00000459274 FAM135BQ49AJ0 1406 aa7.9□□□□□ -1.14
RNU1-88P-201ENST00000459274 CCER2I3L3R5 266 aa7.9□□□□□ -1.14
RNU1-88P-201ENST00000459274 CDK19Q9BWU1 502 aa7.9□□□□□ -1.14
RNU1-88P-201ENST00000459274 PANK3Q9H999 370 aa7.9□□□□□ -1.14
RNU1-88P-201ENST00000459274 KNDC1Q76NI1 1749 aa7.89□□□□□ -1.15
RNU1-88P-201ENST00000459274 ADGRB1O14514 1584 aa7.89□□□□□ -1.15
RNU1-88P-201ENST00000459274 NPHP4O75161 1426 aaPredicted RBP7.89□□□□□ -1.15
RNU1-88P-201ENST00000459274 C11orf95C9JLR9 678 aaPredicted RBP7.89□□□□□ -1.15
RNU1-88P-201ENST00000459274 METP08581 1390 aa7.88□□□□□ -1.15
RNU1-88P-201ENST00000459274 DISP3Q9P2K9 1392 aa7.88□□□□□ -1.15
RNU1-88P-201ENST00000459274 CGNL1Q0VF96 1302 aa7.88□□□□□ -1.15
RNU1-88P-201ENST00000459274 NCKAP5LQ9HCH0 1330 aa7.88□□□□□ -1.15
RNU1-88P-201ENST00000459274 WAPLQ7Z5K2 1190 aa7.88□□□□□ -1.15
RNU1-88P-201ENST00000459274 PROSER2Q86WR7 435 aaPredicted RBP7.88□□□□□ -1.15
RNU1-88P-201ENST00000459274 ZNF692Q9BU19 519 aaPredicted RBP7.88□□□□□ -1.15
RNU1-88P-201ENST00000459274 CHD2O14647 1828 aaKnown RBP7.87□□□□□ -1.15
RNU1-88P-201ENST00000459274 WASLO00401 505 aaPredicted RBP7.87□□□□□ -1.15
RNU1-88P-201ENST00000459274 KCNA6P17658 529 aa7.87□□□□□ -1.15
RNU1-88P-201ENST00000459274 CABP2Q9NPB3 220 aa7.87□□□□□ -1.15
RNU1-88P-201ENST00000459274 NRXN3Q9Y4C0 1643 aa7.86□□□□□ -1.15
RNU1-88P-201ENST00000459274 KDM4FA0A1W2PPD8 638 aa7.86□□□□□ -1.15
RNU1-88P-201ENST00000459274 CC2D1BQ5T0F9 858 aaKnown RBP7.86□□□□□ -1.15
RNU1-88P-201ENST00000459274 PRKRIP1Q9H875 184 aaPredicted RBP7.86□□□□□ -1.15
RNU1-88P-201ENST00000459274 MRS2Q9HD23 443 aa7.86□□□□□ -1.15
RNU1-88P-201ENST00000459274 CCDC61Q9Y6R9 512 aa7.86□□□□□ -1.15
RNU1-88P-201ENST00000459274 SETD1AO15047 1707 aaKnown RBP7.86□□□□□ -1.15
RNU1-88P-201ENST00000459274 ITSN1Q15811 1721 aa7.86□□□□□ -1.15
RNU1-88P-201ENST00000459274 ADAMTS13Q76LX8 1427 aa7.86□□□□□ -1.15
RNU1-88P-201ENST00000459274 CPS1P31327 1500 aa7.85□□□□□ -1.15
RNU1-88P-201ENST00000459274 ATF3P18847 181 aa7.85□□□□□ -1.15
RNU1-88P-201ENST00000459274 MORC1Q86VD1 984 aa7.85□□□□□ -1.15
RNU1-88P-201ENST00000459274 NGDNQ8NEJ9 315 aaKnown RBP7.85□□□□□ -1.15
RNU1-88P-201ENST00000459274 CFAP53Q96M91 514 aa7.85□□□□□ -1.15
RNU1-88P-201ENST00000459274 YTHDC1Q96MU7 727 aaKnown RBP7.85□□□□□ -1.15
RNU1-88P-201ENST00000459274 MED14O60244 1454 aa7.85□□□□□ -1.15
RNU1-88P-201ENST00000459274 TECPR2O15040 1411 aa7.85□□□□□ -1.15
RNU1-88P-201ENST00000459274 MYBBP1AQ9BQG0 1328 aaKnown RBP7.84□□□□□ -1.15
RNU1-88P-201ENST00000459274 NUDT16Q96DE0 195 aaKnown RBP7.84□□□□□ -1.15
RNU1-88P-201ENST00000459274 SLC12A5Q9H2X9 1139 aa7.84□□□□□ -1.15
RNU1-88P-201ENST00000459274 NEFMP07197 916 aa7.83□□□□□ -1.16
RNU1-88P-201ENST00000459274 HSPA2P54652 639 aa7.83□□□□□ -1.16
RNU1-88P-201ENST00000459274 WDR43Q15061 677 aaKnown RBP eCLIP7.83□□□□□ -1.16
RNU1-88P-201ENST00000459274 NLRP13Q86W25 1043 aa7.83□□□□□ -1.16
RNU1-88P-201ENST00000459274 CABP1Q9NZU7 370 aa7.83□□□□□ -1.16
RNU1-88P-201ENST00000459274 PTCH1Q13635 1447 aa7.83□□□□□ -1.16
RNU1-88P-201ENST00000459274 ANKRD36BQ8N2N9 1353 aa7.83□□□□□ -1.16
RNU1-88P-201ENST00000459274 ASXL1Q8IXJ9 1541 aa7.83□□□□□ -1.16
RNU1-88P-201ENST00000459274 FAM9BQ8IZU0 186 aa7.82□□□□□ -1.16
RNU1-88P-201ENST00000459274 C19orf44Q9H6X5 657 aa7.82□□□□□ -1.16
RNU1-88P-201ENST00000459274 NSD2O96028 1365 aa7.82□□□□□ -1.16
RNU1-88P-201ENST00000459274 PPIP5K1Q6PFW1 1433 aa7.81□□□□□ -1.16
RNU1-88P-201ENST00000459274 NUTM2FA1L443 756 aa7.81□□□□□ -1.16
RNU1-88P-201ENST00000459274 PSME1Q06323 249 aa7.81□□□□□ -1.16
RNU1-88P-201ENST00000459274 CADPS2Q86UW7 1296 aa7.81□□□□□ -1.16
RNU1-88P-201ENST00000459274 COG3Q96JB2 828 aa7.81□□□□□ -1.16
RNU1-88P-201ENST00000459274 PNNQ9H307 717 aaKnown RBP7.81□□□□□ -1.16
RNU1-88P-201ENST00000459274 NUDCQ9Y266 331 aa7.81□□□□□ -1.16
RNU1-88P-201ENST00000459274 MSH6P52701 1360 aa7.81□□□□□ -1.16
RNU1-88P-201ENST00000459274 ROBO2Q9HCK4 1378 aa7.81□□□□□ -1.16
RNU1-88P-201ENST00000459274 NPC1L1Q9UHC9 1359 aa7.81□□□□□ -1.16
RNU1-88P-201ENST00000459274 MYOM1P52179 1685 aa7.8□□□□□ -1.16
RNU1-88P-201ENST00000459274 PER1O15534 1290 aaPredicted RBP7.8□□□□□ -1.16
RNU1-88P-201ENST00000459274 PAK3O75914 559 aaPredicted RBP7.8□□□□□ -1.16
RNU1-88P-201ENST00000459274 ESCO1Q5FWF5 840 aa7.8□□□□□ -1.16
RNU1-88P-201ENST00000459274 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.8□□□□□ -1.16
RNU1-88P-201ENST00000459274 BRD4O60885 1362 aaPredicted RBP7.8□□□□□ -1.16
RNU1-88P-201ENST00000459274 XRN1Q8IZH2 1706 aaKnown RBP7.8□□□□□ -1.16
RNU1-88P-201ENST00000459274 NKTRP30414 1462 aaKnown RBP7.8□□□□□ -1.16
RNU1-88P-201ENST00000459274 ATP7BP35670 1465 aa7.8□□□□□ -1.16
RNU1-88P-201ENST00000459274 NSD3Q9BZ95 1437 aa7.79□□□□□ -1.16
RNU1-88P-201ENST00000459274 NCOA3Q9Y6Q9 1424 aa7.79□□□□□ -1.16
RNU1-88P-201ENST00000459274 TULP4Q9NRJ4 1543 aa7.79□□□□□ -1.16
RNU1-88P-201ENST00000459274 KIF20BQ96Q89 1820 aa7.79□□□□□ -1.16
RNU1-88P-201ENST00000459274 PLEKHH1Q9ULM0 1364 aa7.79□□□□□ -1.16
RNU1-88P-201ENST00000459274 ADGRB2O60241 1585 aa7.79□□□□□ -1.16
RNU1-88P-201ENST00000459274 ANKARQ7Z5J8 1434 aa7.78□□□□□ -1.16
RNU1-88P-201ENST00000459274 TNNT2P45379 298 aaPredicted RBP7.78□□□□□ -1.16
RNU1-88P-201ENST00000459274 LMTK3Q96Q04 1460 aa7.78□□□□□ -1.16
RNU1-88P-201ENST00000459274 RGPD8O14715 1765 aaPredicted RBP7.78□□□□□ -1.16
RNU1-88P-201ENST00000459274 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.78□□□□□ -1.16
RNU1-88P-201ENST00000459274 EDC4Q6P2E9 1401 aaKnown RBP7.78□□□□□ -1.16
RNU1-88P-201ENST00000459274 PTPRUQ92729 1446 aa7.78□□□□□ -1.16
RNU1-88P-201ENST00000459274 ACEP12821 1306 aa7.78□□□□□ -1.16
RNU1-88P-201ENST00000459274 TTC21AQ8NDW8 1320 aa7.78□□□□□ -1.16
RNU1-88P-201ENST00000459274 PLEKHG3A1L390 1219 aa7.77□□□□□ -1.17
RNU1-88P-201ENST00000459274 PMFBP1Q8TBY8 1022 aa7.77□□□□□ -1.17
RNU1-88P-201ENST00000459274 PHF8Q9UPP1 1060 aa7.77□□□□□ -1.17
RNU1-88P-201ENST00000459274 USP32Q8NFA0 1604 aa7.77□□□□□ -1.17
RNU1-88P-201ENST00000459274 ADGRL3Q9HAR2 1447 aa7.77□□□□□ -1.17
RNU1-88P-201ENST00000459274 AKAP12Q02952 1782 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms