RNA–Protein interactions for RNA: ENST00000457373.5

RFX3-210, Transcript of regulatory factor X3, humanhuman

TSL 5

Gene RFX3, Length 822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-210ENST00000457373 YTHDC2Q9H6S0 1430 aaKnown RBP14.52□□□□□ -0.08
RFX3-210ENST00000457373 U3KPZ7 1027 aaPredicted RBP14.52□□□□□ -0.09
RFX3-210ENST00000457373 PTCH1Q13635 1447 aa14.51□□□□□ -0.09
RFX3-210ENST00000457373 ATF3P18847 181 aa14.51□□□□□ -0.09
RFX3-210ENST00000457373 WAPLQ7Z5K2 1190 aa14.51□□□□□ -0.09
RFX3-210ENST00000457373 ABCC11Q96J66 1382 aa14.5□□□□□ -0.09
RFX3-210ENST00000457373 KNDC1Q76NI1 1749 aa14.5□□□□□ -0.09
RFX3-210ENST00000457373 TRAK1Q9UPV9 953 aa14.5□□□□□ -0.09
RFX3-210ENST00000457373 NALCNQ8IZF0 1738 aa14.49□□□□□ -0.09
RFX3-210ENST00000457373 TONSLQ96HA7 1378 aa14.49□□□□□ -0.09
RFX3-210ENST00000457373 CADPS2Q86UW7 1296 aa14.49□□□□□ -0.09
RFX3-210ENST00000457373 SLAIN2Q9P270 581 aa14.49□□□□□ -0.09
RFX3-210ENST00000457373 PRAG1Q86YV5 1406 aa14.49□□□□□ -0.09
RFX3-210ENST00000457373 ADGRL3Q9HAR2 1447 aa14.48□□□□□ -0.09
RFX3-210ENST00000457373 PLEKHH1Q9ULM0 1364 aa14.47□□□□□ -0.09
RFX3-210ENST00000457373 ADGRB1O14514 1584 aa14.47□□□□□ -0.09
RFX3-210ENST00000457373 SAFB2Q14151 953 aaKnown RBP eCLIP14.47□□□□□ -0.09
RFX3-210ENST00000457373 NBPF1Q3BBV0 1214 aa14.47□□□□□ -0.09
RFX3-210ENST00000457373 TECPR2O15040 1411 aa14.47□□□□□ -0.09
RFX3-210ENST00000457373 KIAA1210Q9ULL0 1709 aa14.46□□□□□ -0.09
RFX3-210ENST00000457373 HSPA1LP34931 641 aa14.46□□□□□ -0.09
RFX3-210ENST00000457373 CCER1Q8TC90 406 aaPredicted RBP14.46□□□□□ -0.09
RFX3-210ENST00000457373 SIRT1Q96EB6 747 aa14.46□□□□□ -0.09
RFX3-210ENST00000457373 POGKQ9P215 609 aa14.46□□□□□ -0.09
RFX3-210ENST00000457373 ROBO1Q9Y6N7 1651 aa14.46□□□□□ -0.1
RFX3-210ENST00000457373 FAM135BQ49AJ0 1406 aa14.45□□□□□ -0.1
RFX3-210ENST00000457373 PRAM1Q96QH2 718 aa14.45□□□□□ -0.1
RFX3-210ENST00000457373 DCCP43146 1447 aa14.44□□□□□ -0.1
RFX3-210ENST00000457373 DLC1Q96QB1 1528 aa14.43□□□□□ -0.1
RFX3-210ENST00000457373 NBPF8Q3BBV2 869 aa14.43□□□□□ -0.1
RFX3-210ENST00000457373 MST1RQ04912 1400 aa14.42□□□□□ -0.1
RFX3-210ENST00000457373 TRPM1Q7Z4N2 1603 aa14.42□□□□□ -0.1
RFX3-210ENST00000457373 NUTM2FA1L443 756 aa14.42□□□□□ -0.1
RFX3-210ENST00000457373 ARHGEF28Q8N1W1 1705 aaKnown RBP14.41□□□□□ -0.1
RFX3-210ENST00000457373 MINK1Q8N4C8 1332 aaPredicted RBP14.41□□□□□ -0.1
RFX3-210ENST00000457373 CLSPNQ9HAW4 1339 aa14.41□□□□□ -0.1
RFX3-210ENST00000457373 BRINP3Q76B58 766 aa14.4□□□□□ -0.1
RFX3-210ENST00000457373 HIRIP3Q9BW71 556 aaPredicted RBP14.39□□□□□ -0.11
RFX3-210ENST00000457373 CDC42BPGQ6DT37 1551 aa14.39□□□□□ -0.11
RFX3-210ENST00000457373 C1orf167Q5SNV9 1468 aa14.38□□□□□ -0.11
RFX3-210ENST00000457373 PHLPP1O60346 1717 aa14.38□□□□□ -0.11
RFX3-210ENST00000457373 ROCK2O75116 1388 aaKnown RBP14.38□□□□□ -0.11
RFX3-210ENST00000457373 ORAI2Q96SN7 254 aa14.38□□□□□ -0.11
RFX3-210ENST00000457373 ESCO1Q5FWF5 840 aa14.37□□□□□ -0.11
RFX3-210ENST00000457373 FMN2Q9NZ56 1722 aa14.37□□□□□ -0.11
RFX3-210ENST00000457373 DDX17Q92841 729 aaKnown RBP14.36□□□□□ -0.11
RFX3-210ENST00000457373 RGPD8O14715 1765 aaPredicted RBP14.36□□□□□ -0.11
RFX3-210ENST00000457373 CARD11Q9BXL7 1154 aa14.35□□□□□ -0.11
RFX3-210ENST00000457373 ZNF219Q9P2Y4 722 aaPredicted RBP14.34□□□□□ -0.11
RFX3-210ENST00000457373 CENPJQ9HC77 1338 aaPredicted RBP14.34□□□□□ -0.11
RFX3-210ENST00000457373 WASLO00401 505 aaPredicted RBP14.33□□□□□ -0.12
RFX3-210ENST00000457373 TIMELESSQ9UNS1 1208 aa14.33□□□□□ -0.12
RFX3-210ENST00000457373 ADGRB2O60241 1585 aa14.32□□□□□ -0.12
RFX3-210ENST00000457373 NHSL1Q5SYE7 1610 aa14.32□□□□□ -0.12
RFX3-210ENST00000457373 AHDC1Q5TGY3 1603 aaPredicted RBP14.32□□□□□ -0.12
RFX3-210ENST00000457373 RALGAPBQ86X10 1494 aa14.31□□□□□ -0.12
RFX3-210ENST00000457373 COL16A1Q07092 1604 aaPredicted RBP14.31□□□□□ -0.12
RFX3-210ENST00000457373 QRICH2Q9H0J4 1663 aa14.31□□□□□ -0.12
RFX3-210ENST00000457373 FOXO3O43524 673 aa14.3□□□□□ -0.12
RFX3-210ENST00000457373 CDK19Q9BWU1 502 aa14.3□□□□□ -0.12
RFX3-210ENST00000457373 GPRASP1Q5JY77 1395 aa14.3□□□□□ -0.12
RFX3-210ENST00000457373 PMFBP1Q8TBY8 1022 aa14.29□□□□□ -0.12
RFX3-210ENST00000457373 PHF8Q9UPP1 1060 aa14.29□□□□□ -0.12
RFX3-210ENST00000457373 EIF3AQ14152 1382 aaKnown RBP14.29□□□□□ -0.12
RFX3-210ENST00000457373 USP32Q8NFA0 1604 aa14.29□□□□□ -0.12
RFX3-210ENST00000457373 XPCQ01831 940 aaPredicted RBP14.28□□□□□ -0.12
RFX3-210ENST00000457373 PRR36Q9H6K5 1346 aa14.28□□□□□ -0.12
RFX3-210ENST00000457373 KIF1AQ12756 1690 aa14.27□□□□□ -0.12
RFX3-210ENST00000457373 TULP4Q9NRJ4 1543 aa14.27□□□□□ -0.12
RFX3-210ENST00000457373 ANKARQ7Z5J8 1434 aa14.27□□□□□ -0.12
RFX3-210ENST00000457373 JCADQ9P266 1359 aa14.27□□□□□ -0.12
RFX3-210ENST00000457373 NPHP3Q7Z494 1330 aa14.27□□□□□ -0.12
RFX3-210ENST00000457373 SRPK2P78362 688 aaKnown RBP14.27□□□□□ -0.13
RFX3-210ENST00000457373 LRRC59Q96AG4 307 aaKnown RBP14.27□□□□□ -0.13
RFX3-210ENST00000457373 NUDT16Q96DE0 195 aaKnown RBP14.27□□□□□ -0.13
RFX3-210ENST00000457373 CABP2Q9NPB3 220 aa14.26□□□□□ -0.13
RFX3-210ENST00000457373 SOS2Q07890 1332 aaPredicted RBP14.25□□□□□ -0.13
RFX3-210ENST00000457373 KRT28Q7Z3Y7 464 aa14.25□□□□□ -0.13
RFX3-210ENST00000457373 PSME1Q06323 249 aa14.24□□□□□ -0.13
RFX3-210ENST00000457373 ITSN1Q15811 1721 aa14.24□□□□□ -0.13
RFX3-210ENST00000457373 SHPRHQ149N8 1683 aa14.23□□□□□ -0.13
RFX3-210ENST00000457373 EVC2Q86UK5 1308 aa14.23□□□□□ -0.13
RFX3-210ENST00000457373 MED1Q15648 1581 aaPredicted RBP14.23□□□□□ -0.13
RFX3-210ENST00000457373 NUTM2BA6NNL0 878 aaPredicted RBP14.23□□□□□ -0.13
RFX3-210ENST00000457373 NUTM2EB1AL46 878 aaPredicted RBP14.23□□□□□ -0.13
RFX3-210ENST00000457373 NUTM2AQ8IVF1 878 aaPredicted RBP14.23□□□□□ -0.13
RFX3-210ENST00000457373 NGDNQ8NEJ9 315 aaKnown RBP14.23□□□□□ -0.13
RFX3-210ENST00000457373 DISP3Q9P2K9 1392 aa14.22□□□□□ -0.13
RFX3-210ENST00000457373 CCDC61Q9Y6R9 512 aa14.22□□□□□ -0.13
RFX3-210ENST00000457373 ATP7BP35670 1465 aa14.22□□□□□ -0.13
RFX3-210ENST00000457373 PXDNQ92626 1479 aa14.22□□□□□ -0.13
RFX3-210ENST00000457373 ST20-MTHFSA0A0A6YYL1 179 aa14.21□□□□□ -0.13
RFX3-210ENST00000457373 FBXO3Q9UK99 471 aa14.21□□□□□ -0.13
RFX3-210ENST00000457373 PNPLA6Q8IY17 1366 aa14.21□□□□□ -0.14
RFX3-210ENST00000457373 SPATA31A6Q5VVP1 1343 aa14.2□□□□□ -0.14
RFX3-210ENST00000457373 LMOD2Q6P5Q4 547 aa14.2□□□□□ -0.14
RFX3-210ENST00000457373 TOPAZ1Q8N9V7 1692 aa14.2□□□□□ -0.14
RFX3-210ENST00000457373 SPDYE4A6NLX3 237 aa14.19□□□□□ -0.14
RFX3-210ENST00000457373 PLEKHG5O94827 1062 aa14.19□□□□□ -0.14
RFX3-210ENST00000457373 MEX3CQ5U5Q3 659 aaKnown RBP14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms