RNA–Protein interactions for RNA: ENST00000455359.5

HMGXB4-204, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 1,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-204ENST00000455359 CADPS2Q86UW7 1296 aa20.21■□□□□ 0.83
HMGXB4-204ENST00000455359 RBM33Q96EV2 1170 aaKnown RBP20.21■□□□□ 0.83
HMGXB4-204ENST00000455359 TOM1O60784 492 aa20.19■□□□□ 0.82
HMGXB4-204ENST00000455359 ATF3P18847 181 aa20.19■□□□□ 0.82
HMGXB4-204ENST00000455359 SBNO2Q9Y2G9 1366 aa20.17■□□□□ 0.82
HMGXB4-204ENST00000455359 USP47Q96K76 1375 aa20.17■□□□□ 0.82
HMGXB4-204ENST00000455359 SAFB2Q14151 953 aaKnown RBP eCLIP20.16■□□□□ 0.82
HMGXB4-204ENST00000455359 EIF4G2P78344 907 aaKnown RBP eCLIP20.14■□□□□ 0.81
HMGXB4-204ENST00000455359 ST20-MTHFSA0A0A6YYL1 179 aa20.13■□□□□ 0.81
HMGXB4-204ENST00000455359 MINK1Q8N4C8 1332 aaPredicted RBP20.13■□□□□ 0.81
HMGXB4-204ENST00000455359 WASLO00401 505 aaPredicted RBP20.12■□□□□ 0.81
HMGXB4-204ENST00000455359 ARHGEF28Q8N1W1 1705 aaKnown RBP20.12■□□□□ 0.81
HMGXB4-204ENST00000455359 CDC42BPGQ6DT37 1551 aa20.11■□□□□ 0.81
HMGXB4-204ENST00000455359 UBAP1LF5GYI3 381 aa20.11■□□□□ 0.81
HMGXB4-204ENST00000455359 SLAIN2Q9P270 581 aa20.11■□□□□ 0.81
HMGXB4-204ENST00000455359 ADGRB2O60241 1585 aa20.1■□□□□ 0.81
HMGXB4-204ENST00000455359 EVC2Q86UK5 1308 aa20.09■□□□□ 0.81
HMGXB4-204ENST00000455359 PUS7Q96PZ0 661 aaKnown RBP20.09■□□□□ 0.81
HMGXB4-204ENST00000455359 TESK2Q96S53 571 aa20.09■□□□□ 0.81
HMGXB4-204ENST00000455359 HIRIP3Q9BW71 556 aaPredicted RBP20.09■□□□□ 0.81
HMGXB4-204ENST00000455359 XIRP1Q702N8 1843 aaKnown RBP20.08■□□□□ 0.81
HMGXB4-204ENST00000455359 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.08■□□□□ 0.8
HMGXB4-204ENST00000455359 CDK19Q9BWU1 502 aa20.07■□□□□ 0.8
HMGXB4-204ENST00000455359 MST1RQ04912 1400 aa20.07■□□□□ 0.8
HMGXB4-204ENST00000455359 ANKARQ7Z5J8 1434 aa20.07■□□□□ 0.8
HMGXB4-204ENST00000455359 NALCNQ8IZF0 1738 aa20.06■□□□□ 0.8
HMGXB4-204ENST00000455359 HSPA5P11021 654 aaKnown RBP20.05■□□□□ 0.8
HMGXB4-204ENST00000455359 C1orf167Q5SNV9 1468 aa20.05■□□□□ 0.8
HMGXB4-204ENST00000455359 TMF1P82094 1093 aa20.04■□□□□ 0.8
HMGXB4-204ENST00000455359 CDCA8Q53HL2 280 aa20.04■□□□□ 0.8
HMGXB4-204ENST00000455359 FBXO41Q8TF61 875 aa20.03■□□□□ 0.8
HMGXB4-204ENST00000455359 SRPK2P78362 688 aaKnown RBP20.02■□□□□ 0.8
HMGXB4-204ENST00000455359 TULP4Q9NRJ4 1543 aa20.02■□□□□ 0.79
HMGXB4-204ENST00000455359 NUDT16Q96DE0 195 aaKnown RBP20.02■□□□□ 0.79
HMGXB4-204ENST00000455359 CCDC61Q9Y6R9 512 aa20.02■□□□□ 0.79
HMGXB4-204ENST00000455359 QRICH2Q9H0J4 1663 aa20■□□□□ 0.79
HMGXB4-204ENST00000455359 ATAD2Q6PL18 1390 aa20■□□□□ 0.79
HMGXB4-204ENST00000455359 BRINP3Q76B58 766 aa20■□□□□ 0.79
HMGXB4-204ENST00000455359 PIP4K2BP78356 416 aa19.99■□□□□ 0.79
HMGXB4-204ENST00000455359 ESCO1Q5FWF5 840 aa19.99■□□□□ 0.79
HMGXB4-204ENST00000455359 CABP2Q9NPB3 220 aa19.99■□□□□ 0.79
HMGXB4-204ENST00000455359 PRR36Q9H6K5 1346 aa19.98■□□□□ 0.79
HMGXB4-204ENST00000455359 PLEKHG3A1L390 1219 aa19.97■□□□□ 0.79
HMGXB4-204ENST00000455359 NUTM2FA1L443 756 aa19.97■□□□□ 0.79
HMGXB4-204ENST00000455359 ORAI2Q96SN7 254 aa19.97■□□□□ 0.79
HMGXB4-204ENST00000455359 PHF8Q9UPP1 1060 aa19.97■□□□□ 0.79
HMGXB4-204ENST00000455359 FMN2Q9NZ56 1722 aa19.96■□□□□ 0.79
HMGXB4-204ENST00000455359 ATP7BP35670 1465 aa19.96■□□□□ 0.79
HMGXB4-204ENST00000455359 SCAF1Q9H7N4 1312 aaKnown RBP19.95■□□□□ 0.78
HMGXB4-204ENST00000455359 NINLQ9Y2I6 1382 aa19.94■□□□□ 0.78
HMGXB4-204ENST00000455359 DISP3Q9P2K9 1392 aa19.93■□□□□ 0.78
HMGXB4-204ENST00000455359 NPHP3Q7Z494 1330 aa19.93■□□□□ 0.78
HMGXB4-204ENST00000455359 CABP1Q9NZU7 370 aa19.91■□□□□ 0.78
HMGXB4-204ENST00000455359 PPIP5K1Q6PFW1 1433 aa19.91■□□□□ 0.78
HMGXB4-204ENST00000455359 POLR3AO14802 1390 aaPredicted RBP19.9■□□□□ 0.78
HMGXB4-204ENST00000455359 FOXO3O43524 673 aa19.89■□□□□ 0.77
HMGXB4-204ENST00000455359 NGDNQ8NEJ9 315 aaKnown RBP19.89■□□□□ 0.77
HMGXB4-204ENST00000455359 USP32Q8NFA0 1604 aa19.89■□□□□ 0.77
HMGXB4-204ENST00000455359 PSME1Q06323 249 aa19.88■□□□□ 0.77
HMGXB4-204ENST00000455359 PMFBP1Q8TBY8 1022 aa19.88■□□□□ 0.77
HMGXB4-204ENST00000455359 ZNF692Q9BU19 519 aaPredicted RBP19.88■□□□□ 0.77
HMGXB4-204ENST00000455359 BRD4O60885 1362 aaPredicted RBP19.88■□□□□ 0.77
HMGXB4-204ENST00000455359 SOS2Q07890 1332 aaPredicted RBP19.87■□□□□ 0.77
HMGXB4-204ENST00000455359 KIF1AQ12756 1690 aa19.86■□□□□ 0.77
HMGXB4-204ENST00000455359 ROBO1Q9Y6N7 1651 aa19.86■□□□□ 0.77
HMGXB4-204ENST00000455359 TMC1Q8TDI8 760 aa19.86■□□□□ 0.77
HMGXB4-204ENST00000455359 TERF2IPQ9NYB0 399 aa19.86■□□□□ 0.77
HMGXB4-204ENST00000455359 AHDC1Q5TGY3 1603 aaPredicted RBP19.86■□□□□ 0.77
HMGXB4-204ENST00000455359 ACEP12821 1306 aa19.85■□□□□ 0.77
HMGXB4-204ENST00000455359 KRT28Q7Z3Y7 464 aa19.84■□□□□ 0.77
HMGXB4-204ENST00000455359 LRRC59Q96AG4 307 aaKnown RBP19.84■□□□□ 0.77
HMGXB4-204ENST00000455359 SLC12A5Q9H2X9 1139 aa19.84■□□□□ 0.77
HMGXB4-204ENST00000455359 SBNO1A3KN83 1393 aa19.84■□□□□ 0.77
HMGXB4-204ENST00000455359 C11orf95C9JLR9 678 aaPredicted RBP19.83■□□□□ 0.77
HMGXB4-204ENST00000455359 HDGFL2Q7Z4V5 671 aaPredicted RBP19.83■□□□□ 0.77
HMGXB4-204ENST00000455359 KIF7Q2M1P5 1343 aa19.82■□□□□ 0.76
HMGXB4-204ENST00000455359 HSPA1LP34931 641 aa19.82■□□□□ 0.76
HMGXB4-204ENST00000455359 ITSN1Q15811 1721 aa19.82■□□□□ 0.76
HMGXB4-204ENST00000455359 TOPAZ1Q8N9V7 1692 aa19.82■□□□□ 0.76
HMGXB4-204ENST00000455359 CPSF1Q10570 1443 aaKnown RBP19.82■□□□□ 0.76
HMGXB4-204ENST00000455359 PXDNQ92626 1479 aa19.8■□□□□ 0.76
HMGXB4-204ENST00000455359 DDX17Q92841 729 aaKnown RBP19.8■□□□□ 0.76
HMGXB4-204ENST00000455359 ANKRD36BQ8N2N9 1353 aa19.8■□□□□ 0.76
HMGXB4-204ENST00000455359 CCDC7Q96M83 1385 aa19.8■□□□□ 0.76
HMGXB4-204ENST00000455359 USP6P35125 1406 aa19.79■□□□□ 0.76
HMGXB4-204ENST00000455359 NHSL1Q5SYE7 1610 aa19.78■□□□□ 0.76
HMGXB4-204ENST00000455359 SPATA31A3Q5VYP0 1347 aa19.78■□□□□ 0.76
HMGXB4-204ENST00000455359 WASHC2AQ641Q2 1341 aa19.78■□□□□ 0.76
HMGXB4-204ENST00000455359 POLR3GLQ9BT43 218 aa19.77■□□□□ 0.76
HMGXB4-204ENST00000455359 KTN1Q86UP2 1357 aaKnown RBP19.77■□□□□ 0.76
HMGXB4-204ENST00000455359 XPCQ01831 940 aaPredicted RBP19.76■□□□□ 0.75
HMGXB4-204ENST00000455359 ARHGEF10O15013 1369 aa19.76■□□□□ 0.75
HMGXB4-204ENST00000455359 JCADQ9P266 1359 aa19.76■□□□□ 0.75
HMGXB4-204ENST00000455359 CD163L1Q9NR16 1453 aa19.76■□□□□ 0.75
HMGXB4-204ENST00000455359 SSH2Q76I76 1423 aa19.76■□□□□ 0.75
HMGXB4-204ENST00000455359 ILDR1Q86SU0 546 aaPredicted RBP19.76■□□□□ 0.75
HMGXB4-204ENST00000455359 A0A1W2PP64 1363 aa19.76■□□□□ 0.75
HMGXB4-204ENST00000455359 TTC21AQ8NDW8 1320 aa19.75■□□□□ 0.75
HMGXB4-204ENST00000455359 TNS3Q68CZ2 1445 aa19.74■□□□□ 0.75
HMGXB4-204ENST00000455359 EDC4Q6P2E9 1401 aaKnown RBP19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms