RNA–Protein interactions for RNA: ENST00000455343.5

RBM39-220, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 441 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-220ENST00000455343 NR1I2O75469 434 aa6.91□□□□□ -1.3
RBM39-220ENST00000455343 Q6ZNB5 142 aa6.91□□□□□ -1.3
RBM39-220ENST00000455343 PHOX2BQ99453 314 aa6.91□□□□□ -1.3
RBM39-220ENST00000455343 WDR97A6NE52 1622 aa6.9□□□□□ -1.3
RBM39-220ENST00000455343 ADH1BP00325 375 aa6.9□□□□□ -1.3
RBM39-220ENST00000455343 FGD5Q6ZNL6 1462 aa6.9□□□□□ -1.31
RBM39-220ENST00000455343 DDX11L8A8MPP1 907 aa6.89□□□□□ -1.31
RBM39-220ENST00000455343 GFRA3O60609 400 aa6.89□□□□□ -1.31
RBM39-220ENST00000455343 S1PR4O95977 384 aa6.89□□□□□ -1.31
RBM39-220ENST00000455343 PUS10Q3MIT2 529 aaKnown RBP6.89□□□□□ -1.31
RBM39-220ENST00000455343 RDH13Q8NBN7 331 aa6.89□□□□□ -1.31
RBM39-220ENST00000455343 TULP1O00294 542 aaPredicted RBP6.88□□□□□ -1.31
RBM39-220ENST00000455343 NRG2O14511 850 aaPredicted RBP6.88□□□□□ -1.31
RBM39-220ENST00000455343 MAP2K5Q13163 448 aa6.88□□□□□ -1.31
RBM39-220ENST00000455343 SULF1Q8IWU6 871 aa6.88□□□□□ -1.31
RBM39-220ENST00000455343 ANKLE1Q8NAG6 615 aa6.88□□□□□ -1.31
RBM39-220ENST00000455343 SCUBE3Q8IX30 993 aa6.87□□□□□ -1.31
RBM39-220ENST00000455343 EMID1Q96A84 441 aaPredicted RBP6.87□□□□□ -1.31
RBM39-220ENST00000455343 PPEF1O14829 653 aaPredicted RBP6.86□□□□□ -1.31
RBM39-220ENST00000455343 GCGRP47871 477 aa6.86□□□□□ -1.31
RBM39-220ENST00000455343 FUT2Q10981 343 aa6.86□□□□□ -1.31
RBM39-220ENST00000455343 MORN1Q5T089 497 aa6.86□□□□□ -1.31
RBM39-220ENST00000455343 SLC6A16Q9GZN6 736 aa6.86□□□□□ -1.31
RBM39-220ENST00000455343 CUX1P39880 1505 aa6.86□□□□□ -1.31
RBM39-220ENST00000455343 LCE2BO14633 110 aa6.85□□□□□ -1.31
RBM39-220ENST00000455343 SLC19A1P41440 591 aa6.85□□□□□ -1.31
RBM39-220ENST00000455343 NUP160Q12769 1436 aa6.84□□□□□ -1.31
RBM39-220ENST00000455343 ERCC6L2Q5T890 1561 aa6.84□□□□□ -1.31
RBM39-220ENST00000455343 ATP6V1AP38606 617 aa6.84□□□□□ -1.31
RBM39-220ENST00000455343 SPSB2Q99619 263 aa6.84□□□□□ -1.31
RBM39-220ENST00000455343 PDZRN3Q9UPQ7 1066 aa6.84□□□□□ -1.31
RBM39-220ENST00000455343 ABCA10Q8WWZ4 1543 aa6.84□□□□□ -1.31
RBM39-220ENST00000455343 IRF6O14896 467 aa6.83□□□□□ -1.32
RBM39-220ENST00000455343 LIAT1Q6ZQX7 453 aa6.83□□□□□ -1.32
RBM39-220ENST00000455343 THAP11Q96EK4 314 aa6.83□□□□□ -1.32
RBM39-220ENST00000455343 MINK1Q8N4C8 1332 aaPredicted RBP6.82□□□□□ -1.32
RBM39-220ENST00000455343 GRIN2AQ12879 1464 aa6.82□□□□□ -1.32
RBM39-220ENST00000455343 CD46P15529 392 aa6.82□□□□□ -1.32
RBM39-220ENST00000455343 PLA2G2CQ5R387 149 aa6.82□□□□□ -1.32
RBM39-220ENST00000455343 SPRYD7Q5W111 196 aa6.82□□□□□ -1.32
RBM39-220ENST00000455343 TRAF7Q6Q0C0 670 aa6.82□□□□□ -1.32
RBM39-220ENST00000455343 TRIM67Q6ZTA4 783 aa6.82□□□□□ -1.32
RBM39-220ENST00000455343 CCDC102AQ96A19 550 aa6.82□□□□□ -1.32
RBM39-220ENST00000455343 SLC27A5Q9Y2P5 690 aa6.82□□□□□ -1.32
RBM39-220ENST00000455343 ZNF598Q86UK7 904 aaKnown RBP6.81□□□□□ -1.32
RBM39-220ENST00000455343 CEP170Q5SW79 1584 aa6.81□□□□□ -1.32
RBM39-220ENST00000455343 FMNL1O95466 1100 aaPredicted RBP6.8□□□□□ -1.32
RBM39-220ENST00000455343 MDM2Q00987 491 aaPredicted RBP6.8□□□□□ -1.32
RBM39-220ENST00000455343 ZNF697Q5TEC3 545 aa6.8□□□□□ -1.32
RBM39-220ENST00000455343 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.8□□□□□ -1.32
RBM39-220ENST00000455343 SALL2Q9Y467 1007 aaPredicted RBP6.8□□□□□ -1.32
RBM39-220ENST00000455343 ABCC10Q5T3U5 1492 aa6.79□□□□□ -1.32
RBM39-220ENST00000455343 FAM69CQ0P6D2 419 aa6.79□□□□□ -1.32
RBM39-220ENST00000455343 GRIPAP1Q4V328 841 aa6.79□□□□□ -1.32
RBM39-220ENST00000455343 BRICD5Q6PL45 260 aa6.79□□□□□ -1.32
RBM39-220ENST00000455343 FAM160A2Q8N612 972 aaPredicted RBP6.79□□□□□ -1.32
RBM39-220ENST00000455343 ABCA5Q8WWZ7 1642 aa6.79□□□□□ -1.32
RBM39-220ENST00000455343 FHAD1B1AJZ9 1412 aa6.78□□□□□ -1.32
RBM39-220ENST00000455343 PRR20EP86478 221 aa6.78□□□□□ -1.32
RBM39-220ENST00000455343 PRR20CP86479 221 aa6.78□□□□□ -1.32
RBM39-220ENST00000455343 PRR20DP86480 221 aa6.78□□□□□ -1.32
RBM39-220ENST00000455343 PRR20BP86481 221 aa6.78□□□□□ -1.32
RBM39-220ENST00000455343 PRR20AP86496 221 aa6.78□□□□□ -1.32
RBM39-220ENST00000455343 PRDM9Q9NQV7 894 aa6.78□□□□□ -1.32
RBM39-220ENST00000455343 PRG4Q92954 1404 aaPredicted RBP6.77□□□□□ -1.33
RBM39-220ENST00000455343 SHROOM2Q13796 1616 aa6.77□□□□□ -1.33
RBM39-220ENST00000455343 MSS51Q4VC12 460 aa6.77□□□□□ -1.33
RBM39-220ENST00000455343 LMOD2Q6P5Q4 547 aa6.77□□□□□ -1.33
RBM39-220ENST00000455343 RNF19BQ6ZMZ0 732 aa6.77□□□□□ -1.33
RBM39-220ENST00000455343 FCF1Q9Y324 198 aaKnown RBP6.77□□□□□ -1.33
RBM39-220ENST00000455343 WRNQ14191 1432 aaPredicted RBP eCLIP6.76□□□□□ -1.33
RBM39-220ENST00000455343 GDF9O60383 454 aa6.76□□□□□ -1.33
RBM39-220ENST00000455343 KDM4AO75164 1064 aa6.76□□□□□ -1.33
RBM39-220ENST00000455343 GPCPD1Q9NPB8 672 aa6.76□□□□□ -1.33
RBM39-220ENST00000455343 ADAMTS12P58397 1594 aa6.75□□□□□ -1.33
RBM39-220ENST00000455343 CLCN1P35523 988 aa6.75□□□□□ -1.33
RBM39-220ENST00000455343 RPIAP49247 311 aa6.75□□□□□ -1.33
RBM39-220ENST00000455343 USP46P62068 366 aa6.75□□□□□ -1.33
RBM39-220ENST00000455343 Q3C1V9 767 aa6.75□□□□□ -1.33
RBM39-220ENST00000455343 MAPKBP1O60336 1514 aa6.75□□□□□ -1.33
RBM39-220ENST00000455343 PBRM1Q86U86 1689 aa6.74□□□□□ -1.33
RBM39-220ENST00000455343 TNFRSF10AO00220 468 aa6.74□□□□□ -1.33
RBM39-220ENST00000455343 FAM217BQ9NTX9 383 aaPredicted RBP6.74□□□□□ -1.33
RBM39-220ENST00000455343 KIF13AQ9H1H9 1805 aa6.73□□□□□ -1.33
RBM39-220ENST00000455343 HOXA2O43364 376 aa6.73□□□□□ -1.33
RBM39-220ENST00000455343 DGAT1O75907 488 aa6.73□□□□□ -1.33
RBM39-220ENST00000455343 PKDCCQ504Y2 493 aa6.73□□□□□ -1.33
RBM39-220ENST00000455343 HLA-CQ95604 372 aa6.73□□□□□ -1.33
RBM39-220ENST00000455343 ERICH3Q5RHP9 1530 aa6.72□□□□□ -1.33
RBM39-220ENST00000455343 MMP16P51512 607 aa6.72□□□□□ -1.33
RBM39-220ENST00000455343 BARGINQ6ZT62 677 aa6.72□□□□□ -1.33
RBM39-220ENST00000455343 PKD2L1Q9P0L9 805 aa6.72□□□□□ -1.33
RBM39-220ENST00000455343 DIP2BQ9P265 1576 aa6.72□□□□□ -1.33
RBM39-220ENST00000455343 FAM187AA6NFU0 413 aa6.71□□□□□ -1.34
RBM39-220ENST00000455343 ZMYND10O75800 440 aa6.71□□□□□ -1.34
RBM39-220ENST00000455343 USB1Q9BQ65 265 aaKnown RBP6.71□□□□□ -1.34
RBM39-220ENST00000455343 REPIN1Q9BWE0 567 aaKnown RBP6.71□□□□□ -1.34
RBM39-220ENST00000455343 DXOO77932 396 aaKnown RBP6.7□□□□□ -1.34
RBM39-220ENST00000455343 MYT1Q01538 1121 aa6.7□□□□□ -1.34
RBM39-220ENST00000455343 GUCA2AQ02747 115 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms