RNA–Protein interactions for RNA: ENST00000455220.6

CCDC90B-202, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-202ENST00000455220 ZNF316A6NFI3 1004 aaPredicted RBP23.23■■□□□ 1.31
CCDC90B-202ENST00000455220 SAFB2Q14151 953 aaKnown RBP eCLIP23.23■■□□□ 1.31
CCDC90B-202ENST00000455220 TULP4Q9NRJ4 1543 aa23.21■■□□□ 1.31
CCDC90B-202ENST00000455220 DISP3Q9P2K9 1392 aa23.2■■□□□ 1.3
CCDC90B-202ENST00000455220 TMF1P82094 1093 aa23.2■■□□□ 1.3
CCDC90B-202ENST00000455220 NCOA3Q9Y6Q9 1424 aa23.2■■□□□ 1.3
CCDC90B-202ENST00000455220 MINK1Q8N4C8 1332 aaPredicted RBP23.2■■□□□ 1.3
CCDC90B-202ENST00000455220 C11orf95C9JLR9 678 aaPredicted RBP23.19■■□□□ 1.3
CCDC90B-202ENST00000455220 PROSER2Q86WR7 435 aaPredicted RBP23.18■■□□□ 1.3
CCDC90B-202ENST00000455220 NALCNQ8IZF0 1738 aa23.18■■□□□ 1.3
CCDC90B-202ENST00000455220 ADGRL3Q9HAR2 1447 aa23.18■■□□□ 1.3
CCDC90B-202ENST00000455220 LRRC7Q96NW7 1537 aa23.17■■□□□ 1.3
CCDC90B-202ENST00000455220 EVC2Q86UK5 1308 aa23.17■■□□□ 1.3
CCDC90B-202ENST00000455220 TMEM94Q12767 1356 aa23.17■■□□□ 1.3
CCDC90B-202ENST00000455220 LTBP4Q8N2S1 1624 aa23.16■■□□□ 1.3
CCDC90B-202ENST00000455220 KIF7Q2M1P5 1343 aa23.15■■□□□ 1.3
CCDC90B-202ENST00000455220 CCDC7Q96M83 1385 aa23.15■■□□□ 1.3
CCDC90B-202ENST00000455220 XIRP1Q702N8 1843 aaKnown RBP23.15■■□□□ 1.3
CCDC90B-202ENST00000455220 CDC42BPGQ6DT37 1551 aa23.15■■□□□ 1.3
CCDC90B-202ENST00000455220 WASHC2AQ641Q2 1341 aa23.14■■□□□ 1.3
CCDC90B-202ENST00000455220 CDCA8Q53HL2 280 aa23.14■■□□□ 1.29
CCDC90B-202ENST00000455220 PUS7Q96PZ0 661 aaKnown RBP23.14■■□□□ 1.29
CCDC90B-202ENST00000455220 WASLO00401 505 aaPredicted RBP23.13■■□□□ 1.29
CCDC90B-202ENST00000455220 RBM33Q96EV2 1170 aaKnown RBP23.13■■□□□ 1.29
CCDC90B-202ENST00000455220 CDK19Q9BWU1 502 aa23.1■■□□□ 1.29
CCDC90B-202ENST00000455220 FMN2Q9NZ56 1722 aa23.08■■□□□ 1.29
CCDC90B-202ENST00000455220 DCCP43146 1447 aa23.08■■□□□ 1.29
CCDC90B-202ENST00000455220 C19orf44Q9H6X5 657 aa23.08■■□□□ 1.29
CCDC90B-202ENST00000455220 CABP2Q9NPB3 220 aa23.07■■□□□ 1.28
CCDC90B-202ENST00000455220 ATAD2Q6PL18 1390 aa23.07■■□□□ 1.28
CCDC90B-202ENST00000455220 SRPK2P78362 688 aaKnown RBP23.06■■□□□ 1.28
CCDC90B-202ENST00000455220 C14orf37Q86TY3 774 aa23.06■■□□□ 1.28
CCDC90B-202ENST00000455220 ATP7BP35670 1465 aa23.06■■□□□ 1.28
CCDC90B-202ENST00000455220 MYOM1P52179 1685 aa23.05■■□□□ 1.28
CCDC90B-202ENST00000455220 USP32Q8NFA0 1604 aa23.04■■□□□ 1.28
CCDC90B-202ENST00000455220 ANKARQ7Z5J8 1434 aa23.04■■□□□ 1.28
CCDC90B-202ENST00000455220 MSH6P52701 1360 aa23.04■■□□□ 1.28
CCDC90B-202ENST00000455220 PRR36Q9H6K5 1346 aa23.03■■□□□ 1.28
CCDC90B-202ENST00000455220 TOPAZ1Q8N9V7 1692 aa23.02■■□□□ 1.28
CCDC90B-202ENST00000455220 POLR3GLQ9BT43 218 aa23.01■■□□□ 1.27
CCDC90B-202ENST00000455220 NINLQ9Y2I6 1382 aa23.01■■□□□ 1.27
CCDC90B-202ENST00000455220 NUDT16Q96DE0 195 aaKnown RBP23.01■■□□□ 1.27
CCDC90B-202ENST00000455220 ITSN1Q15811 1721 aa22.99■■□□□ 1.27
CCDC90B-202ENST00000455220 CADPS2Q86UW7 1296 aa22.98■■□□□ 1.27
CCDC90B-202ENST00000455220 CCDC61Q9Y6R9 512 aa22.98■■□□□ 1.27
CCDC90B-202ENST00000455220 MST1RQ04912 1400 aa22.98■■□□□ 1.27
CCDC90B-202ENST00000455220 RGPD8O14715 1765 aaPredicted RBP22.97■■□□□ 1.27
CCDC90B-202ENST00000455220 ATF3P18847 181 aa22.97■■□□□ 1.27
CCDC90B-202ENST00000455220 PPIP5K1Q6PFW1 1433 aa22.95■■□□□ 1.27
CCDC90B-202ENST00000455220 C1orf167Q5SNV9 1468 aa22.95■■□□□ 1.26
CCDC90B-202ENST00000455220 NUTM2FA1L443 756 aa22.95■■□□□ 1.26
CCDC90B-202ENST00000455220 IQSEC2Q5JU85 1478 aa22.95■■□□□ 1.26
CCDC90B-202ENST00000455220 SLC12A5Q9H2X9 1139 aa22.94■■□□□ 1.26
CCDC90B-202ENST00000455220 DDX10Q13206 875 aaKnown RBP22.93■■□□□ 1.26
CCDC90B-202ENST00000455220 TMC1Q8TDI8 760 aa22.93■■□□□ 1.26
CCDC90B-202ENST00000455220 PLEKHG3A1L390 1219 aa22.93■■□□□ 1.26
CCDC90B-202ENST00000455220 CABP1Q9NZU7 370 aa22.93■■□□□ 1.26
CCDC90B-202ENST00000455220 CD163L1Q9NR16 1453 aa22.92■■□□□ 1.26
CCDC90B-202ENST00000455220 ANKRD36BQ8N2N9 1353 aa22.91■■□□□ 1.26
CCDC90B-202ENST00000455220 CPSF1Q10570 1443 aaKnown RBP22.89■■□□□ 1.25
CCDC90B-202ENST00000455220 FBXO41Q8TF61 875 aa22.89■■□□□ 1.25
CCDC90B-202ENST00000455220 PANK3Q9H999 370 aa22.89■■□□□ 1.25
CCDC90B-202ENST00000455220 A0A1W2PP64 1363 aa22.88■■□□□ 1.25
CCDC90B-202ENST00000455220 POLR3AO14802 1390 aaPredicted RBP22.88■■□□□ 1.25
CCDC90B-202ENST00000455220 AKAP12Q02952 1782 aa22.88■■□□□ 1.25
CCDC90B-202ENST00000455220 KIF1AQ12756 1690 aa22.87■■□□□ 1.25
CCDC90B-202ENST00000455220 TERF2IPQ9NYB0 399 aa22.87■■□□□ 1.25
CCDC90B-202ENST00000455220 SLAIN2Q9P270 581 aa22.86■■□□□ 1.25
CCDC90B-202ENST00000455220 PHF8Q9UPP1 1060 aa22.86■■□□□ 1.25
CCDC90B-202ENST00000455220 ESCO1Q5FWF5 840 aa22.85■■□□□ 1.25
CCDC90B-202ENST00000455220 ORAI2Q96SN7 254 aa22.85■■□□□ 1.25
CCDC90B-202ENST00000455220 MON2Q7Z3U7 1717 aa22.85■■□□□ 1.25
CCDC90B-202ENST00000455220 ACEP12821 1306 aa22.85■■□□□ 1.25
CCDC90B-202ENST00000455220 HDGFL2Q7Z4V5 671 aaPredicted RBP22.84■■□□□ 1.25
CCDC90B-202ENST00000455220 PER1O15534 1290 aaPredicted RBP22.84■■□□□ 1.25
CCDC90B-202ENST00000455220 PMFBP1Q8TBY8 1022 aa22.84■■□□□ 1.25
CCDC90B-202ENST00000455220 CERKQ8TCT0 537 aa22.84■■□□□ 1.25
CCDC90B-202ENST00000455220 ZNF692Q9BU19 519 aaPredicted RBP22.83■■□□□ 1.25
CCDC90B-202ENST00000455220 CARD14Q9BXL6 1004 aa22.83■■□□□ 1.25
CCDC90B-202ENST00000455220 KTN1Q86UP2 1357 aaKnown RBP22.8■■□□□ 1.24
CCDC90B-202ENST00000455220 NGDNQ8NEJ9 315 aaKnown RBP22.8■■□□□ 1.24
CCDC90B-202ENST00000455220 USP6P35125 1406 aa22.8■■□□□ 1.24
CCDC90B-202ENST00000455220 NSD3Q9BZ95 1437 aa22.8■■□□□ 1.24
CCDC90B-202ENST00000455220 NRKQ7Z2Y5 1582 aa22.8■■□□□ 1.24
CCDC90B-202ENST00000455220 BRINP3Q76B58 766 aa22.8■■□□□ 1.24
CCDC90B-202ENST00000455220 EDC4Q6P2E9 1401 aaKnown RBP22.79■■□□□ 1.24
CCDC90B-202ENST00000455220 SSH2Q76I76 1423 aa22.79■■□□□ 1.24
CCDC90B-202ENST00000455220 TOM1O60784 492 aa22.77■■□□□ 1.24
CCDC90B-202ENST00000455220 BRD4O60885 1362 aaPredicted RBP22.77■■□□□ 1.24
CCDC90B-202ENST00000455220 DIEXFQ68CQ4 756 aaKnown RBP22.76■■□□□ 1.23
CCDC90B-202ENST00000455220 KNSTRNQ9Y448 316 aa22.76■■□□□ 1.23
CCDC90B-202ENST00000455220 ROBO1Q9Y6N7 1651 aa22.75■■□□□ 1.23
CCDC90B-202ENST00000455220 NPC1L1Q9UHC9 1359 aa22.74■■□□□ 1.23
CCDC90B-202ENST00000455220 FOXO3O43524 673 aa22.74■■□□□ 1.23
CCDC90B-202ENST00000455220 AMER1Q5JTC6 1135 aaPredicted RBP22.74■■□□□ 1.23
CCDC90B-202ENST00000455220 NHSL1Q5SYE7 1610 aa22.73■■□□□ 1.23
CCDC90B-202ENST00000455220 NPHP3Q7Z494 1330 aa22.73■■□□□ 1.23
CCDC90B-202ENST00000455220 TRPM3Q9HCF6 1732 aaPredicted RBP22.73■■□□□ 1.23
CCDC90B-202ENST00000455220 CGNL1Q0VF96 1302 aa22.72■■□□□ 1.23
CCDC90B-202ENST00000455220 TTC21BQ7Z4L5 1316 aa22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms