RNA–Protein interactions for RNA: ENST00000454591.6

ECHDC1-209, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,515 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-209ENST00000454591 NSD3Q9BZ95 1437 aa16.43■□□□□ 0.22
ECHDC1-209ENST00000454591 IQSEC2Q5JU85 1478 aa16.43■□□□□ 0.22
ECHDC1-209ENST00000454591 E9PSI1 815 aa16.42■□□□□ 0.22
ECHDC1-209ENST00000454591 VGFO15240 615 aaPredicted RBP16.42■□□□□ 0.22
ECHDC1-209ENST00000454591 BACH2Q9BYV9 841 aa16.42■□□□□ 0.22
ECHDC1-209ENST00000454591 TMEM131LA2VDJ0 1609 aa16.42■□□□□ 0.22
ECHDC1-209ENST00000454591 ANKRD36BQ8N2N9 1353 aa16.4■□□□□ 0.22
ECHDC1-209ENST00000454591 SLC52A1Q9NWF4 448 aa16.4■□□□□ 0.22
ECHDC1-209ENST00000454591 ANKRD26Q9UPS8 1709 aa16.4■□□□□ 0.22
ECHDC1-209ENST00000454591 PLIN1O60240 522 aa16.4■□□□□ 0.22
ECHDC1-209ENST00000454591 GGT6Q6P531 493 aa16.4■□□□□ 0.22
ECHDC1-209ENST00000454591 CENPQQ7L2Z9 268 aaPredicted RBP16.4■□□□□ 0.22
ECHDC1-209ENST00000454591 PDE4AP27815 886 aa16.39■□□□□ 0.21
ECHDC1-209ENST00000454591 EVC2Q86UK5 1308 aa16.38■□□□□ 0.21
ECHDC1-209ENST00000454591 ADGRB2O60241 1585 aa16.38■□□□□ 0.21
ECHDC1-209ENST00000454591 APAF1O14727 1248 aa16.38■□□□□ 0.21
ECHDC1-209ENST00000454591 MYO5BQ9ULV0 1848 aa16.38■□□□□ 0.21
ECHDC1-209ENST00000454591 MED14O60244 1454 aa16.38■□□□□ 0.21
ECHDC1-209ENST00000454591 AGLP35573 1532 aa16.37■□□□□ 0.21
ECHDC1-209ENST00000454591 TRAK1Q9UPV9 953 aa16.37■□□□□ 0.21
ECHDC1-209ENST00000454591 CGNL1Q0VF96 1302 aa16.36■□□□□ 0.21
ECHDC1-209ENST00000454591 CCDC27Q2M243 656 aa16.35■□□□□ 0.21
ECHDC1-209ENST00000454591 C20orf194Q5TEA3 1177 aa16.35■□□□□ 0.21
ECHDC1-209ENST00000454591 CHGAP10645 457 aaKnown RBP16.35■□□□□ 0.21
ECHDC1-209ENST00000454591 MORC1Q86VD1 984 aa16.35■□□□□ 0.21
ECHDC1-209ENST00000454591 PTPRMP28827 1452 aa16.34■□□□□ 0.21
ECHDC1-209ENST00000454591 YEATS2Q9ULM3 1422 aa16.34■□□□□ 0.21
ECHDC1-209ENST00000454591 AAMPQ13685 434 aa16.34■□□□□ 0.21
ECHDC1-209ENST00000454591 PDE3AQ14432 1141 aa16.34■□□□□ 0.21
ECHDC1-209ENST00000454591 RUNDC1Q96C34 613 aa16.34■□□□□ 0.21
ECHDC1-209ENST00000454591 CCDC146Q8IYE0 955 aa16.33■□□□□ 0.2
ECHDC1-209ENST00000454591 SLC12A5Q9H2X9 1139 aa16.33■□□□□ 0.2
ECHDC1-209ENST00000454591 SPINK5Q9NQ38 1064 aaPredicted RBP16.33■□□□□ 0.2
ECHDC1-209ENST00000454591 PPP6R1Q9UPN7 881 aa16.33■□□□□ 0.2
ECHDC1-209ENST00000454591 ABCC11Q96J66 1382 aa16.33■□□□□ 0.2
ECHDC1-209ENST00000454591 PAK3O75914 559 aaPredicted RBP16.32■□□□□ 0.2
ECHDC1-209ENST00000454591 RAPGEF3O95398 923 aa16.32■□□□□ 0.2
ECHDC1-209ENST00000454591 WDR63Q8IWG1 891 aa16.32■□□□□ 0.2
ECHDC1-209ENST00000454591 WWC1Q8IX03 1113 aa16.32■□□□□ 0.2
ECHDC1-209ENST00000454591 DLC1Q96QB1 1528 aa16.31■□□□□ 0.2
ECHDC1-209ENST00000454591 IDI1Q13907 227 aa16.31■□□□□ 0.2
ECHDC1-209ENST00000454591 ZBTB47Q9UFB7 747 aaPredicted RBP16.31■□□□□ 0.2
ECHDC1-209ENST00000454591 VIRMAQ69YN4 1812 aaKnown RBP16.31■□□□□ 0.2
ECHDC1-209ENST00000454591 ATAD2Q6PL18 1390 aa16.3■□□□□ 0.2
ECHDC1-209ENST00000454591 TMEM132EQ6IEE7 984 aa16.3■□□□□ 0.2
ECHDC1-209ENST00000454591 CFAP53Q96M91 514 aa16.29■□□□□ 0.2
ECHDC1-209ENST00000454591 DIP2BQ9P265 1576 aa16.29■□□□□ 0.2
ECHDC1-209ENST00000454591 COL3A1P02461 1466 aaPredicted RBP16.29■□□□□ 0.2
ECHDC1-209ENST00000454591 ALKQ9UM73 1620 aa16.28■□□□□ 0.2
ECHDC1-209ENST00000454591 SPATA31D1Q6ZQQ2 1576 aa16.28■□□□□ 0.2
ECHDC1-209ENST00000454591 NLRP1Q9C000 1473 aa16.28■□□□□ 0.2
ECHDC1-209ENST00000454591 SETD1AO15047 1707 aaKnown RBP16.27■□□□□ 0.2
ECHDC1-209ENST00000454591 DMRT2Q9Y5R5 561 aa16.27■□□□□ 0.2
ECHDC1-209ENST00000454591 ZMYM3Q14202 1370 aa16.27■□□□□ 0.19
ECHDC1-209ENST00000454591 CDC42BPGQ6DT37 1551 aa16.26■□□□□ 0.19
ECHDC1-209ENST00000454591 YTHDC2Q9H6S0 1430 aaKnown RBP16.26■□□□□ 0.19
ECHDC1-209ENST00000454591 CD163L1Q9NR16 1453 aa16.25■□□□□ 0.19
ECHDC1-209ENST00000454591 ARHGEF40Q8TER5 1519 aa16.25■□□□□ 0.19
ECHDC1-209ENST00000454591 KIF20BQ96Q89 1820 aa16.25■□□□□ 0.19
ECHDC1-209ENST00000454591 MTHFSP49914 203 aa16.24■□□□□ 0.19
ECHDC1-209ENST00000454591 TCP11L2Q8N4U5 519 aa16.24■□□□□ 0.19
ECHDC1-209ENST00000454591 DDRGK1Q96HY6 314 aa16.24■□□□□ 0.19
ECHDC1-209ENST00000454591 A0A1W2PP64 1363 aa16.24■□□□□ 0.19
ECHDC1-209ENST00000454591 CT47B1P0C2W7 299 aaPredicted RBP16.24■□□□□ 0.19
ECHDC1-209ENST00000454591 BCAR3O75815 825 aa16.23■□□□□ 0.19
ECHDC1-209ENST00000454591 FAM161AQ3B820 660 aa16.22■□□□□ 0.19
ECHDC1-209ENST00000454591 PNPLA6Q8IY17 1366 aa16.21■□□□□ 0.19
ECHDC1-209ENST00000454591 ATP7BP35670 1465 aa16.2■□□□□ 0.18
ECHDC1-209ENST00000454591 RARSP54136 660 aaKnown RBP16.2■□□□□ 0.18
ECHDC1-209ENST00000454591 RIMBP3CA6NJZ7 1639 aa16.2■□□□□ 0.18
ECHDC1-209ENST00000454591 RIMBP3BA6NNM3 1639 aa16.2■□□□□ 0.18
ECHDC1-209ENST00000454591 RIMBP3Q9UFD9 1639 aa16.2■□□□□ 0.18
ECHDC1-209ENST00000454591 A2ML1A8K2U0 1454 aa16.2■□□□□ 0.18
ECHDC1-209ENST00000454591 C8orf34Q49A92 452 aa16.19■□□□□ 0.18
ECHDC1-209ENST00000454591 TERF2IPQ9NYB0 399 aa16.19■□□□□ 0.18
ECHDC1-209ENST00000454591 IL16Q14005 1332 aa16.19■□□□□ 0.18
ECHDC1-209ENST00000454591 CLUAP1Q96AJ1 413 aa16.19■□□□□ 0.18
ECHDC1-209ENST00000454591 CABP2Q9NPB3 220 aa16.19■□□□□ 0.18
ECHDC1-209ENST00000454591 KNDC1Q76NI1 1749 aa16.18■□□□□ 0.18
ECHDC1-209ENST00000454591 MYH16Q9H6N6 1097 aa16.18■□□□□ 0.18
ECHDC1-209ENST00000454591 USP35Q9P2H5 1018 aa16.18■□□□□ 0.18
ECHDC1-209ENST00000454591 MAPK8IP3Q9UPT6 1336 aa16.17■□□□□ 0.18
ECHDC1-209ENST00000454591 PLEKHF1Q96S99 279 aa16.17■□□□□ 0.18
ECHDC1-209ENST00000454591 NRXN3Q9Y4C0 1643 aa16.15■□□□□ 0.18
ECHDC1-209ENST00000454591 FYB1O15117 783 aa16.14■□□□□ 0.18
ECHDC1-209ENST00000454591 PPM1GO15355 546 aaPredicted RBP16.14■□□□□ 0.18
ECHDC1-209ENST00000454591 PMFBP1Q8TBY8 1022 aa16.14■□□□□ 0.17
ECHDC1-209ENST00000454591 TNNT2P45379 298 aaPredicted RBP16.13■□□□□ 0.17
ECHDC1-209ENST00000454591 SRPK2P78362 688 aaKnown RBP16.13■□□□□ 0.17
ECHDC1-209ENST00000454591 NUTM2DQ5VT03 806 aaPredicted RBP16.13■□□□□ 0.17
ECHDC1-209ENST00000454591 PRAM1Q96QH2 718 aa16.13■□□□□ 0.17
ECHDC1-209ENST00000454591 PNNQ9H307 717 aaKnown RBP16.13■□□□□ 0.17
ECHDC1-209ENST00000454591 RIMS2Q9UQ26 1411 aa16.12■□□□□ 0.17
ECHDC1-209ENST00000454591 IGHDP01880 384 aa16.12■□□□□ 0.17
ECHDC1-209ENST00000454591 U2AF1L5P0DN76 240 aaPredicted RBP16.12■□□□□ 0.17
ECHDC1-209ENST00000454591 U2AF1Q01081 240 aaKnown RBP eCLIP16.12■□□□□ 0.17
ECHDC1-209ENST00000454591 HDGFL2Q7Z4V5 671 aaPredicted RBP16.12■□□□□ 0.17
ECHDC1-209ENST00000454591 NPM2Q86SE8 214 aaKnown RBP16.12■□□□□ 0.17
ECHDC1-209ENST00000454591 SKAP1Q86WV1 359 aa16.12■□□□□ 0.17
ECHDC1-209ENST00000454591 TECPR2O15040 1411 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms