RNA–Protein interactions for RNA: ENST00000453091.6

RIF1-206, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 8,053 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-206ENST00000453091 THUMPD2Q9BTF0 503 aaKnown RBP9.45□□□□□ -0.9
RIF1-206ENST00000453091 INTS3Q68E01 1043 aaKnown RBP9.45□□□□□ -0.9
RIF1-206ENST00000453091 PKNOX2Q96KN3 472 aa9.45□□□□□ -0.9
RIF1-206ENST00000453091 SMC3Q9UQE7 1217 aa9.45□□□□□ -0.9
RIF1-206ENST00000453091 EVA1CP58658 441 aa9.45□□□□□ -0.9
RIF1-206ENST00000453091 CEBPZQ03701 1054 aaKnown RBP9.45□□□□□ -0.9
RIF1-206ENST00000453091 RAD21O60216 631 aa9.45□□□□□ -0.9
RIF1-206ENST00000453091 PRKAR2BP31323 418 aa9.45□□□□□ -0.9
RIF1-206ENST00000453091 TEFQ10587 303 aa9.45□□□□□ -0.9
RIF1-206ENST00000453091 MAPK8IP2Q13387 824 aaPredicted RBP9.45□□□□□ -0.9
RIF1-206ENST00000453091 PSME1Q06323 249 aa9.45□□□□□ -0.9
RIF1-206ENST00000453091 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.45□□□□□ -0.9
RIF1-206ENST00000453091 PRDM10Q9NQV6 1147 aa9.45□□□□□ -0.9
RIF1-206ENST00000453091 MIS18AQ9NYP9 233 aa9.45□□□□□ -0.9
RIF1-206ENST00000453091 NEK4P51957 841 aa9.44□□□□□ -0.9
RIF1-206ENST00000453091 NOC3LQ8WTT2 800 aaKnown RBP9.44□□□□□ -0.9
RIF1-206ENST00000453091 IFIT2P09913 472 aaKnown RBP9.44□□□□□ -0.9
RIF1-206ENST00000453091 RRS1Q15050 365 aaKnown RBP9.44□□□□□ -0.9
RIF1-206ENST00000453091 API5Q9BZZ5 524 aaKnown RBP9.44□□□□□ -0.9
RIF1-206ENST00000453091 GRPEL1Q9HAV7 217 aa9.44□□□□□ -0.9
RIF1-206ENST00000453091 SYNJ1O43426 1573 aa9.44□□□□□ -0.9
RIF1-206ENST00000453091 GTF2E1P29083 439 aaPredicted RBP9.44□□□□□ -0.9
RIF1-206ENST00000453091 MTMR7Q9Y216 660 aa9.44□□□□□ -0.9
RIF1-206ENST00000453091 CABP1Q9NZU7 370 aa9.43□□□□□ -0.9
RIF1-206ENST00000453091 FBLN1P23142 703 aa9.43□□□□□ -0.9
RIF1-206ENST00000453091 FIBPO43427 364 aa9.43□□□□□ -0.9
RIF1-206ENST00000453091 REC8O95072 547 aa9.43□□□□□ -0.9
RIF1-206ENST00000453091 STK3Q13188 491 aa9.43□□□□□ -0.9
RIF1-206ENST00000453091 CHMP4CQ96CF2 233 aa9.43□□□□□ -0.9
RIF1-206ENST00000453091 PATL2C9JE40 543 aaKnown RBP9.43□□□□□ -0.9
RIF1-206ENST00000453091 C9orf78Q9NZ63 289 aaPredicted RBP9.43□□□□□ -0.9
RIF1-206ENST00000453091 SMARCA5O60264 1052 aaPredicted RBP9.42□□□□□ -0.9
RIF1-206ENST00000453091 NLRP6P59044 892 aa9.42□□□□□ -0.9
RIF1-206ENST00000453091 SLC26A8Q96RN1 970 aa9.42□□□□□ -0.9
RIF1-206ENST00000453091 NLRP2Q9NX02 1062 aa9.42□□□□□ -0.9
RIF1-206ENST00000453091 DDX54Q8TDD1 881 aaKnown RBP9.42□□□□□ -0.9
RIF1-206ENST00000453091 HOMER1Q86YM7 354 aa9.42□□□□□ -0.9
RIF1-206ENST00000453091 FYB1O15117 783 aa9.42□□□□□ -0.9
RIF1-206ENST00000453091 NUCB2P80303 420 aa9.41□□□□□ -0.9
RIF1-206ENST00000453091 SAMD1Q6SPF0 538 aaPredicted RBP9.41□□□□□ -0.9
RIF1-206ENST00000453091 DCTN1Q14203 1278 aa9.41□□□□□ -0.9
RIF1-206ENST00000453091 LARP6Q9BRS8 491 aaKnown RBP9.41□□□□□ -0.9
RIF1-206ENST00000453091 TTLL5Q6EMB2 1281 aa9.41□□□□□ -0.9
RIF1-206ENST00000453091 MCM4P33991 863 aa9.41□□□□□ -0.9
RIF1-206ENST00000453091 FMNL2Q96PY5 1086 aa9.41□□□□□ -0.9
RIF1-206ENST00000453091 ESCO1Q5FWF5 840 aa9.4□□□□□ -0.9
RIF1-206ENST00000453091 GNAI1P63096 354 aa9.4□□□□□ -0.9
RIF1-206ENST00000453091 TPD52L1Q16890 204 aaPredicted RBP9.4□□□□□ -0.9
RIF1-206ENST00000453091 NEUROD6Q96NK8 337 aa9.4□□□□□ -0.9
RIF1-206ENST00000453091 TWISTNBQ3B726 338 aaPredicted RBP9.4□□□□□ -0.9
RIF1-206ENST00000453091 TSPY26PQ9H489 355 aa9.4□□□□□ -0.9
RIF1-206ENST00000453091 CCDC39Q9UFE4 941 aa9.4□□□□□ -0.9
RIF1-206ENST00000453091 IGHDP01880 384 aa9.39□□□□□ -0.91
RIF1-206ENST00000453091 TTC5Q8N0Z6 440 aa9.39□□□□□ -0.91
RIF1-206ENST00000453091 CDK19Q9BWU1 502 aa9.39□□□□□ -0.91
RIF1-206ENST00000453091 TNNQ9UQP3 1299 aa9.39□□□□□ -0.91
RIF1-206ENST00000453091 SCAPERQ9BY12 1400 aa9.39□□□□□ -0.91
RIF1-206ENST00000453091 APPP05067 770 aa9.39□□□□□ -0.91
RIF1-206ENST00000453091 DNAJC2Q99543 621 aaKnown RBP9.39□□□□□ -0.91
RIF1-206ENST00000453091 WAPLQ7Z5K2 1190 aa9.39□□□□□ -0.91
RIF1-206ENST00000453091 WWC1Q8IX03 1113 aa9.39□□□□□ -0.91
RIF1-206ENST00000453091 UQCRHLA0A096LP55 91 aa9.39□□□□□ -0.91
RIF1-206ENST00000453091 UQCRHP07919 91 aa9.39□□□□□ -0.91
RIF1-206ENST00000453091 SKIDA1Q1XH10 827 aa9.39□□□□□ -0.91
RIF1-206ENST00000453091 VPS53Q5VIR6 699 aa9.39□□□□□ -0.91
RIF1-206ENST00000453091 ZKSCAN1P17029 563 aaPredicted RBP9.39□□□□□ -0.91
RIF1-206ENST00000453091 SASS6Q6UVJ0 657 aa9.39□□□□□ -0.91
RIF1-206ENST00000453091 SURF6O75683 361 aaKnown RBP9.39□□□□□ -0.91
RIF1-206ENST00000453091 GOLGA6L1Q8N7Z2 621 aa9.39□□□□□ -0.91
RIF1-206ENST00000453091 SSFA2P28290 1259 aa9.38□□□□□ -0.91
RIF1-206ENST00000453091 SLFN5Q08AF3 891 aa9.38□□□□□ -0.91
RIF1-206ENST00000453091 TMEM57Q8N5G2 664 aa9.38□□□□□ -0.91
RIF1-206ENST00000453091 CASKIN1Q8WXD9 1431 aa9.38□□□□□ -0.91
RIF1-206ENST00000453091 TPM3P06753 285 aa9.38□□□□□ -0.91
RIF1-206ENST00000453091 USHBP1Q8N6Y0 703 aa9.38□□□□□ -0.91
RIF1-206ENST00000453091 IL1RAPL2Q9NP60 686 aa9.38□□□□□ -0.91
RIF1-206ENST00000453091 PDILTQ8N807 584 aa9.38□□□□□ -0.91
RIF1-206ENST00000453091 G3V3G9 751 aa9.38□□□□□ -0.91
RIF1-206ENST00000453091 K7ELQ4 463 aaPredicted RBP9.38□□□□□ -0.91
RIF1-206ENST00000453091 ATP2B1P20020 1258 aa9.38□□□□□ -0.91
RIF1-206ENST00000453091 MVPQ14764 893 aaKnown RBP9.38□□□□□ -0.91
RIF1-206ENST00000453091 DCAF8Q5TAQ9 597 aa9.38□□□□□ -0.91
RIF1-206ENST00000453091 SULT6B1Q6IMI4 303 aa9.38□□□□□ -0.91
RIF1-206ENST00000453091 SIL1Q9H173 461 aa9.38□□□□□ -0.91
RIF1-206ENST00000453091 STRN4Q9NRL3 753 aa9.37□□□□□ -0.91
RIF1-206ENST00000453091 ATP6V1DQ9Y5K8 247 aa9.37□□□□□ -0.91
RIF1-206ENST00000453091 CDK13Q14004 1512 aaKnown RBP9.37□□□□□ -0.91
RIF1-206ENST00000453091 G3BP1Q13283 466 aaKnown RBP eCLIP9.37□□□□□ -0.918e-6■■■■□ 20.2
RIF1-206ENST00000453091 SLC4A2P04920 1241 aa9.37□□□□□ -0.91
RIF1-206ENST00000453091 RIC3Q7Z5B4 369 aa9.37□□□□□ -0.91
RIF1-206ENST00000453091 TRIM5Q9C035 493 aa9.37□□□□□ -0.91
RIF1-206ENST00000453091 UBTFL1P0CB47 393 aaPredicted RBP9.37□□□□□ -0.91
RIF1-206ENST00000453091 CCDC173Q0VFZ6 552 aa9.37□□□□□ -0.91
RIF1-206ENST00000453091 CHD1LQ86WJ1 897 aa9.37□□□□□ -0.91
RIF1-206ENST00000453091 CCDC85AQ96PX6 553 aaPredicted RBP9.37□□□□□ -0.91
RIF1-206ENST00000453091 DHX37Q8IY37 1157 aaKnown RBP9.36□□□□□ -0.91
RIF1-206ENST00000453091 ABTB2Q8N961 1025 aa9.36□□□□□ -0.91
RIF1-206ENST00000453091 PCMTD1Q96MG8 357 aaPredicted RBP9.36□□□□□ -0.91
RIF1-206ENST00000453091 NUTM1Q86Y26 1132 aa9.36□□□□□ -0.91
RIF1-206ENST00000453091 FSD1Q9BTV5 496 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 129.9 ms