RNA–Protein interactions for RNA: ENST00000452143.5

USP1-204, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 3

Gene USP1, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-204ENST00000452143 NUTM2AQ8IVF1 878 aaPredicted RBP16.35■□□□□ 0.21
USP1-204ENST00000452143 RXRBP28702 533 aa16.34■□□□□ 0.21
USP1-204ENST00000452143 AFF2P51816 1311 aa16.34■□□□□ 0.21
USP1-204ENST00000452143 TECPR2O15040 1411 aa16.34■□□□□ 0.21
USP1-204ENST00000452143 SOS2Q07890 1332 aaPredicted RBP16.33■□□□□ 0.2
USP1-204ENST00000452143 SPATA31E1Q6ZUB1 1445 aa16.33■□□□□ 0.2
USP1-204ENST00000452143 DDX17Q92841 729 aaKnown RBP16.32■□□□□ 0.2
USP1-204ENST00000452143 ANKRD30BQ9BXX2 1392 aa16.32■□□□□ 0.2
USP1-204ENST00000452143 PIK3C2GO75747 1445 aa16.29■□□□□ 0.2
USP1-204ENST00000452143 ACIN1Q9UKV3 1341 aaKnown RBP16.29■□□□□ 0.2
USP1-204ENST00000452143 MARF1Q9Y4F3 1742 aaKnown RBP16.29■□□□□ 0.2
USP1-204ENST00000452143 PPP4R3CPQ6ZMV5 832 aa16.29■□□□□ 0.2
USP1-204ENST00000452143 UPF1Q92900 1129 aaKnown RBP eCLIP16.29■□□□□ 0.2
USP1-204ENST00000452143 C8orf37Q96NL8 207 aa16.29■□□□□ 0.2
USP1-204ENST00000452143 RGS12O14924 1447 aa16.28■□□□□ 0.2
USP1-204ENST00000452143 ORAI2Q96SN7 254 aa16.28■□□□□ 0.2
USP1-204ENST00000452143 PXDNQ92626 1479 aa16.28■□□□□ 0.2
USP1-204ENST00000452143 KIF1AQ12756 1690 aa16.27■□□□□ 0.2
USP1-204ENST00000452143 NPHP3Q7Z494 1330 aa16.27■□□□□ 0.2
USP1-204ENST00000452143 FMN2Q9NZ56 1722 aa16.27■□□□□ 0.19
USP1-204ENST00000452143 LRPPRCP42704 1394 aaKnown RBP16.26■□□□□ 0.19
USP1-204ENST00000452143 ADGRF5Q8IZF2 1346 aa16.26■□□□□ 0.19
USP1-204ENST00000452143 RBM6P78332 1123 aaKnown RBP16.26■□□□□ 0.19
USP1-204ENST00000452143 MYOM2P54296 1465 aa16.26■□□□□ 0.19
USP1-204ENST00000452143 ABCC11Q96J66 1382 aa16.26■□□□□ 0.19
USP1-204ENST00000452143 MPHOSPH9Q99550 1183 aa16.25■□□□□ 0.19
USP1-204ENST00000452143 NGLY1Q96IV0 654 aa16.24■□□□□ 0.19
USP1-204ENST00000452143 QTRT2Q9H974 415 aaKnown RBP16.24■□□□□ 0.19
USP1-204ENST00000452143 ADAMTS2O95450 1211 aa16.23■□□□□ 0.19
USP1-204ENST00000452143 NRXN1Q9ULB1 1477 aa16.22■□□□□ 0.19
USP1-204ENST00000452143 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.22■□□□□ 0.19
USP1-204ENST00000452143 YTHDC2Q9H6S0 1430 aaKnown RBP16.22■□□□□ 0.19
USP1-204ENST00000452143 RGL3Q3MIN7 710 aa16.22■□□□□ 0.19
USP1-204ENST00000452143 ESCO1Q5FWF5 840 aa16.22■□□□□ 0.19
USP1-204ENST00000452143 FNBP4Q8N3X1 1017 aaPredicted RBP16.2■□□□□ 0.18
USP1-204ENST00000452143 USP21Q9UK80 565 aa16.2■□□□□ 0.18
USP1-204ENST00000452143 TRPC5Q9UL62 973 aaPredicted RBP16.2■□□□□ 0.18
USP1-204ENST00000452143 ATRNO75882 1429 aa16.19■□□□□ 0.18
USP1-204ENST00000452143 EP400Q96L91 3159 aa16.19■□□□□ 0.18
USP1-204ENST00000452143 ATAD2Q6PL18 1390 aa16.18■□□□□ 0.18
USP1-204ENST00000452143 PLEKHH1Q9ULM0 1364 aa16.18■□□□□ 0.18
USP1-204ENST00000452143 WAPLQ7Z5K2 1190 aa16.18■□□□□ 0.18
USP1-204ENST00000452143 RNF216Q9NWF9 866 aaPredicted RBP16.18■□□□□ 0.18
USP1-204ENST00000452143 STK26Q9P289 416 aa16.18■□□□□ 0.18
USP1-204ENST00000452143 FOXO3O43524 673 aa16.17■□□□□ 0.18
USP1-204ENST00000452143 SIRT1Q96EB6 747 aa16.17■□□□□ 0.18
USP1-204ENST00000452143 RGPD8O14715 1765 aaPredicted RBP16.17■□□□□ 0.18
USP1-204ENST00000452143 USP32Q8NFA0 1604 aa16.16■□□□□ 0.18
USP1-204ENST00000452143 DLC1Q96QB1 1528 aa16.16■□□□□ 0.18
USP1-204ENST00000452143 TMEM132EQ6IEE7 984 aa16.16■□□□□ 0.18
USP1-204ENST00000452143 CNKSR2Q8WXI2 1034 aa16.16■□□□□ 0.18
USP1-204ENST00000452143 ADGRB2O60241 1585 aa16.16■□□□□ 0.18
USP1-204ENST00000452143 BCL9LQ86UU0 1499 aa16.16■□□□□ 0.18
USP1-204ENST00000452143 C14orf93Q9H972 538 aaKnown RBP16.15■□□□□ 0.18
USP1-204ENST00000452143 DHX57Q6P158 1386 aaKnown RBP16.14■□□□□ 0.17
USP1-204ENST00000452143 ABCA3Q99758 1704 aa16.14■□□□□ 0.17
USP1-204ENST00000452143 NUTM2FA1L443 756 aa16.13■□□□□ 0.17
USP1-204ENST00000452143 XPCQ01831 940 aaPredicted RBP16.13■□□□□ 0.17
USP1-204ENST00000452143 SPATA31A3Q5VYP0 1347 aa16.13■□□□□ 0.17
USP1-204ENST00000452143 TNS3Q68CZ2 1445 aa16.12■□□□□ 0.17
USP1-204ENST00000452143 NWD2Q9ULI1 1742 aa16.12■□□□□ 0.17
USP1-204ENST00000452143 SLIT2O94813 1529 aa16.12■□□□□ 0.17
USP1-204ENST00000452143 ADGRB1O14514 1584 aa16.12■□□□□ 0.17
USP1-204ENST00000452143 RAB3GAP2Q9H2M9 1393 aa16.12■□□□□ 0.17
USP1-204ENST00000452143 PLCH1Q4KWH8 1693 aa16.11■□□□□ 0.17
USP1-204ENST00000452143 ANKARQ7Z5J8 1434 aa16.11■□□□□ 0.17
USP1-204ENST00000452143 GLI3P10071 1580 aa16.09■□□□□ 0.17
USP1-204ENST00000452143 SRCAPQ6ZRS2 3230 aa16.09■□□□□ 0.17
USP1-204ENST00000452143 CFAP70Q5T0N1 1121 aa16.09■□□□□ 0.17
USP1-204ENST00000452143 PHF8Q9UPP1 1060 aa16.08■□□□□ 0.16
USP1-204ENST00000452143 SBNO1A3KN83 1393 aa16.08■□□□□ 0.16
USP1-204ENST00000452143 KRT28Q7Z3Y7 464 aa16.07■□□□□ 0.16
USP1-204ENST00000452143 GJD4Q96KN9 370 aaPredicted RBP16.07■□□□□ 0.16
USP1-204ENST00000452143 PRAM1Q96QH2 718 aa16.07■□□□□ 0.16
USP1-204ENST00000452143 ARHGEF10O15013 1369 aa16.07■□□□□ 0.16
USP1-204ENST00000452143 RALGAPBQ86X10 1494 aa16.07■□□□□ 0.16
USP1-204ENST00000452143 TRPM3Q9HCF6 1732 aaPredicted RBP16.06■□□□□ 0.16
USP1-204ENST00000452143 EIF3AQ14152 1382 aaKnown RBP16.06■□□□□ 0.16
USP1-204ENST00000452143 PSME1Q06323 249 aa16.06■□□□□ 0.16
USP1-204ENST00000452143 UNC5CLQ8IV45 518 aa16.05■□□□□ 0.16
USP1-204ENST00000452143 ALS2Q96Q42 1657 aa16.05■□□□□ 0.16
USP1-204ENST00000452143 TULP4Q9NRJ4 1543 aa16.04■□□□□ 0.16
USP1-204ENST00000452143 BRWD3Q6RI45 1802 aa16.04■□□□□ 0.16
USP1-204ENST00000452143 CCDC125Q86Z20 511 aa16.04■□□□□ 0.16
USP1-204ENST00000452143 ITSN1Q15811 1721 aa16.04■□□□□ 0.16
USP1-204ENST00000452143 ARHGEF28Q8N1W1 1705 aaKnown RBP16.03■□□□□ 0.16
USP1-204ENST00000452143 STAC3Q96MF2 364 aa16.03■□□□□ 0.16
USP1-204ENST00000452143 POGKQ9P215 609 aa16.03■□□□□ 0.16
USP1-204ENST00000452143 HAP1P54257 671 aaPredicted RBP16.02■□□□□ 0.16
USP1-204ENST00000452143 SAFB2Q14151 953 aaKnown RBP eCLIP16.02■□□□□ 0.16
USP1-204ENST00000452143 NRAPQ86VF7 1730 aa16.02■□□□□ 0.15
USP1-204ENST00000452143 CRYBG1Q9Y4K1 1723 aa16.01■□□□□ 0.15
USP1-204ENST00000452143 COL14A1Q05707 1796 aaKnown RBP16■□□□□ 0.15
USP1-204ENST00000452143 VPS72Q15906 364 aa15.99■□□□□ 0.15
USP1-204ENST00000452143 BLMP54132 1417 aaPredicted RBP15.99■□□□□ 0.15
USP1-204ENST00000452143 GPRASP1Q5JY77 1395 aa15.99■□□□□ 0.15
USP1-204ENST00000452143 HRCP23327 699 aa15.98■□□□□ 0.15
USP1-204ENST00000452143 KIAA1210Q9ULL0 1709 aa15.98■□□□□ 0.15
USP1-204ENST00000452143 TRAK1Q9UPV9 953 aa15.98■□□□□ 0.15
USP1-204ENST00000452143 PMFBP1Q8TBY8 1022 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms