RNA–Protein interactions for RNA: ENST00000451871.1

KARSP1-201, Transcript of lysyl-tRNA synthetase pseudogene 1, humanhuman

BASIC

Gene KARSP1, Length 1,752 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARSP1-201ENST00000451871 SETBP1Q9Y6X0 1596 aa9.87□□□□□ -0.83
KARSP1-201ENST00000451871 FMN1Q68DA7 1419 aa9.87□□□□□ -0.83
KARSP1-201ENST00000451871 DCBLD2Q96PD2 775 aa9.86□□□□□ -0.83
KARSP1-201ENST00000451871 POTEFA5A3E0 1075 aa9.86□□□□□ -0.83
KARSP1-201ENST00000451871 POTEHQ6S545 545 aa9.86□□□□□ -0.83
KARSP1-201ENST00000451871 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.85□□□□□ -0.83
KARSP1-201ENST00000451871 PLXNC1O60486 1568 aa9.85□□□□□ -0.83
KARSP1-201ENST00000451871 LRRIQ1Q96JM4 1722 aa9.85□□□□□ -0.83
KARSP1-201ENST00000451871 G3V3G9 751 aa9.85□□□□□ -0.83
KARSP1-201ENST00000451871 ZMYND10O75800 440 aa9.85□□□□□ -0.83
KARSP1-201ENST00000451871 SMYD5Q6GMV2 418 aa9.85□□□□□ -0.83
KARSP1-201ENST00000451871 THEMISQ8N1K5 641 aaPredicted RBP9.85□□□□□ -0.83
KARSP1-201ENST00000451871 A2MP01023 1474 aa9.85□□□□□ -0.83
KARSP1-201ENST00000451871 CDC42BPAQ5VT25 1732 aa9.84□□□□□ -0.83
KARSP1-201ENST00000451871 MED14O60244 1454 aa9.84□□□□□ -0.83
KARSP1-201ENST00000451871 HNRNPMP52272 730 aaKnown RBP eCLIP9.84□□□□□ -0.83
KARSP1-201ENST00000451871 PDIA6Q15084 440 aa9.84□□□□□ -0.83
KARSP1-201ENST00000451871 RBM26Q5T8P6 1007 aaKnown RBP9.84□□□□□ -0.83
KARSP1-201ENST00000451871 FBXO31Q5XUX0 539 aaPredicted RBP9.84□□□□□ -0.83
KARSP1-201ENST00000451871 ZNF777Q9ULD5 760 aaPredicted RBP9.84□□□□□ -0.83
KARSP1-201ENST00000451871 NPHP4O75161 1426 aaPredicted RBP9.84□□□□□ -0.83
KARSP1-201ENST00000451871 SEC24BO95487 1268 aa9.83□□□□□ -0.84
KARSP1-201ENST00000451871 TNRQ92752 1358 aa9.83□□□□□ -0.84
KARSP1-201ENST00000451871 XIRP1Q702N8 1843 aaKnown RBP9.83□□□□□ -0.84
KARSP1-201ENST00000451871 L3MBTL3Q96JM7 780 aaPredicted RBP9.83□□□□□ -0.84
KARSP1-201ENST00000451871 ATP7AQ04656 1500 aa9.83□□□□□ -0.84
KARSP1-201ENST00000451871 DEPDC5O75140 1603 aa9.82□□□□□ -0.84
KARSP1-201ENST00000451871 RBM33Q96EV2 1170 aaKnown RBP9.82□□□□□ -0.84
KARSP1-201ENST00000451871 IQGAP1P46940 1657 aa9.81□□□□□ -0.84
KARSP1-201ENST00000451871 SYCP2Q9BX26 1530 aa9.81□□□□□ -0.84
KARSP1-201ENST00000451871 POTEIP0CG38 1075 aa9.81□□□□□ -0.84
KARSP1-201ENST00000451871 EEA1Q15075 1411 aa9.8□□□□□ -0.84
KARSP1-201ENST00000451871 ROBO1Q9Y6N7 1651 aa9.8□□□□□ -0.84
KARSP1-201ENST00000451871 SLC39A7Q92504 469 aa9.8□□□□□ -0.84
KARSP1-201ENST00000451871 UGGT1Q9NYU2 1555 aa9.79□□□□□ -0.84
KARSP1-201ENST00000451871 INO80Q9ULG1 1556 aaPredicted RBP9.79□□□□□ -0.84
KARSP1-201ENST00000451871 ARHGAP35Q9NRY4 1499 aa9.79□□□□□ -0.84
KARSP1-201ENST00000451871 SPDYE16A6NNV3 312 aaPredicted RBP9.79□□□□□ -0.84
KARSP1-201ENST00000451871 GPBP1L1Q9HC44 474 aaPredicted RBP9.79□□□□□ -0.84
KARSP1-201ENST00000451871 LRP5O75197 1615 aa9.79□□□□□ -0.84
KARSP1-201ENST00000451871 FAM135AQ9P2D6 1515 aa9.79□□□□□ -0.84
KARSP1-201ENST00000451871 FAM135BQ49AJ0 1406 aa9.79□□□□□ -0.84
KARSP1-201ENST00000451871 ADGBQ8N7X0 1667 aa9.79□□□□□ -0.84
KARSP1-201ENST00000451871 CDK12Q9NYV4 1490 aaPredicted RBP9.79□□□□□ -0.84
KARSP1-201ENST00000451871 MIA2Q96PC5 1412 aa9.78□□□□□ -0.84
KARSP1-201ENST00000451871 METRNQ9UJH8 293 aa9.78□□□□□ -0.84
KARSP1-201ENST00000451871 PHLPP1O60346 1717 aa9.77□□□□□ -0.84
KARSP1-201ENST00000451871 PZPP20742 1482 aa9.77□□□□□ -0.84
KARSP1-201ENST00000451871 NLRP1Q9C000 1473 aa9.77□□□□□ -0.84
KARSP1-201ENST00000451871 C7P10643 843 aa9.77□□□□□ -0.85
KARSP1-201ENST00000451871 KIAA1107Q9UPP5 1409 aa9.77□□□□□ -0.85
KARSP1-201ENST00000451871 GPATCH8Q9UKJ3 1502 aaKnown RBP9.76□□□□□ -0.85
KARSP1-201ENST00000451871 UBTFP17480 764 aaKnown RBP9.75□□□□□ -0.85
KARSP1-201ENST00000451871 ZNF772Q68DY9 489 aaPredicted RBP9.75□□□□□ -0.85
KARSP1-201ENST00000451871 BARGINQ6ZT62 677 aa9.75□□□□□ -0.85
KARSP1-201ENST00000451871 GPIHBP1Q8IV16 184 aa9.75□□□□□ -0.85
KARSP1-201ENST00000451871 KIF3BO15066 747 aa9.75□□□□□ -0.85
KARSP1-201ENST00000451871 MAP3K9P80192 1104 aa9.75□□□□□ -0.85
KARSP1-201ENST00000451871 WASHC2CQ9Y4E1 1318 aa9.75□□□□□ -0.85
KARSP1-201ENST00000451871 ZC3H13Q5T200 1668 aaKnown RBP9.74□□□□□ -0.85
KARSP1-201ENST00000451871 PLEKHH2Q8IVE3 1493 aa9.74□□□□□ -0.85
KARSP1-201ENST00000451871 OXER1Q8TDS5 423 aa9.74□□□□□ -0.85
KARSP1-201ENST00000451871 CFDP1Q9UEE9 299 aaPredicted RBP9.74□□□□□ -0.85
KARSP1-201ENST00000451871 DHX29Q7Z478 1369 aaKnown RBP9.74□□□□□ -0.85
KARSP1-201ENST00000451871 CCDC18Q5T9S5 1454 aa9.74□□□□□ -0.85
KARSP1-201ENST00000451871 RXRBP28702 533 aa9.73□□□□□ -0.85
KARSP1-201ENST00000451871 IL27Q8NEV9 243 aa9.73□□□□□ -0.85
KARSP1-201ENST00000451871 CFAP65Q6ZU64 1925 aaKnown RBP9.73□□□□□ -0.85
KARSP1-201ENST00000451871 KDM5DQ9BY66 1539 aa9.73□□□□□ -0.85
KARSP1-201ENST00000451871 LRP6O75581 1613 aa9.72□□□□□ -0.85
KARSP1-201ENST00000451871 GRXCR2A6NFK2 248 aa9.71□□□□□ -0.85
KARSP1-201ENST00000451871 RTEL1-TNFRSF6BF6WH68 1400 aa9.7□□□□□ -0.86
KARSP1-201ENST00000451871 CASKIN1Q8WXD9 1431 aa9.7□□□□□ -0.86
KARSP1-201ENST00000451871 JCADQ9P266 1359 aa9.7□□□□□ -0.86
KARSP1-201ENST00000451871 PODXL2Q9NZ53 605 aa9.7□□□□□ -0.86
KARSP1-201ENST00000451871 LTKP29376 864 aa9.7□□□□□ -0.86
KARSP1-201ENST00000451871 MEX3CQ5U5Q3 659 aaKnown RBP9.7□□□□□ -0.86
KARSP1-201ENST00000451871 SP7Q8TDD2 431 aaPredicted RBP9.7□□□□□ -0.86
KARSP1-201ENST00000451871 RGS12O14924 1447 aa9.69□□□□□ -0.86
KARSP1-201ENST00000451871 GPR37O15354 613 aa9.69□□□□□ -0.86
KARSP1-201ENST00000451871 C3orf67Q6ZVT6 689 aa9.69□□□□□ -0.86
KARSP1-201ENST00000451871 AK7Q96M32 723 aa9.69□□□□□ -0.86
KARSP1-201ENST00000451871 SCAF11Q99590 1463 aaKnown RBP9.69□□□□□ -0.86
KARSP1-201ENST00000451871 ZNF644Q9H582 1327 aaPredicted RBP9.68□□□□□ -0.86
KARSP1-201ENST00000451871 TXNDC2Q86VQ3 553 aa9.68□□□□□ -0.86
KARSP1-201ENST00000451871 TMEM94Q12767 1356 aa9.68□□□□□ -0.86
KARSP1-201ENST00000451871 CCNB3Q8WWL7 1395 aa9.68□□□□□ -0.86
KARSP1-201ENST00000451871 OSBPP22059 807 aa9.68□□□□□ -0.86
KARSP1-201ENST00000451871 KRI1Q8N9T8 703 aaKnown RBP9.68□□□□□ -0.86
KARSP1-201ENST00000451871 MBD5Q9P267 1494 aa9.67□□□□□ -0.86
KARSP1-201ENST00000451871 UBR1Q8IWV7 1749 aa9.67□□□□□ -0.86
KARSP1-201ENST00000451871 SHPRHQ149N8 1683 aa9.67□□□□□ -0.86
KARSP1-201ENST00000451871 COL16A1Q07092 1604 aaPredicted RBP9.67□□□□□ -0.86
KARSP1-201ENST00000451871 NUTM2BA6NNL0 878 aaPredicted RBP9.67□□□□□ -0.86
KARSP1-201ENST00000451871 NUTM2EB1AL46 878 aaPredicted RBP9.67□□□□□ -0.86
KARSP1-201ENST00000451871 NUTM2DQ5VT03 806 aaPredicted RBP9.67□□□□□ -0.86
KARSP1-201ENST00000451871 NUTM2AQ8IVF1 878 aaPredicted RBP9.67□□□□□ -0.86
KARSP1-201ENST00000451871 DDX12PQ92771 950 aa9.67□□□□□ -0.86
KARSP1-201ENST00000451871 KDM4CQ9H3R0 1056 aa9.67□□□□□ -0.86
KARSP1-201ENST00000451871 PTGER2P43116 358 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms