RNA–Protein interactions for RNA: ENST00000450385.5

SGCE-208, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-208ENST00000450385 TMEM132EQ6IEE7 984 aa23.44■■□□□ 1.34
SGCE-208ENST00000450385 STK26Q9P289 416 aa23.44■■□□□ 1.34
SGCE-208ENST00000450385 CFAP70Q5T0N1 1121 aa23.41■■□□□ 1.34
SGCE-208ENST00000450385 WAPLQ7Z5K2 1190 aa23.4■■□□□ 1.34
SGCE-208ENST00000450385 SOS2Q07890 1332 aaPredicted RBP23.39■■□□□ 1.34
SGCE-208ENST00000450385 MEX3CQ5U5Q3 659 aaKnown RBP23.38■■□□□ 1.33
SGCE-208ENST00000450385 ZNF772Q68DY9 489 aaPredicted RBP23.38■■□□□ 1.33
SGCE-208ENST00000450385 DCAF11Q8TEB1 546 aa23.38■■□□□ 1.33
SGCE-208ENST00000450385 NPHP3Q7Z494 1330 aa23.37■■□□□ 1.33
SGCE-208ENST00000450385 ORAI2Q96SN7 254 aa23.37■■□□□ 1.33
SGCE-208ENST00000450385 DLC1Q96QB1 1528 aa23.37■■□□□ 1.33
SGCE-208ENST00000450385 ESCO1Q5FWF5 840 aa23.35■■□□□ 1.33
SGCE-208ENST00000450385 POTEAQ6S8J7 498 aa23.34■■□□□ 1.33
SGCE-208ENST00000450385 PNPLA6Q8IY17 1366 aa23.33■■□□□ 1.33
SGCE-208ENST00000450385 LRP6O75581 1613 aa23.33■■□□□ 1.32
SGCE-208ENST00000450385 KDM2AQ9Y2K7 1162 aa23.32■■□□□ 1.32
SGCE-208ENST00000450385 FMN2Q9NZ56 1722 aa23.31■■□□□ 1.32
SGCE-208ENST00000450385 PLEKHH1Q9ULM0 1364 aa23.31■■□□□ 1.32
SGCE-208ENST00000450385 ADGRB1O14514 1584 aa23.31■■□□□ 1.32
SGCE-208ENST00000450385 DDX17Q92841 729 aaKnown RBP23.3■■□□□ 1.32
SGCE-208ENST00000450385 POGKQ9P215 609 aa23.3■■□□□ 1.32
SGCE-208ENST00000450385 PRAM1Q96QH2 718 aa23.29■■□□□ 1.32
SGCE-208ENST00000450385 KIF1AQ12756 1690 aa23.28■■□□□ 1.32
SGCE-208ENST00000450385 NUTM2BA6NNL0 878 aaPredicted RBP23.28■■□□□ 1.32
SGCE-208ENST00000450385 NUTM2EB1AL46 878 aaPredicted RBP23.28■■□□□ 1.32
SGCE-208ENST00000450385 NUTM2AQ8IVF1 878 aaPredicted RBP23.28■■□□□ 1.32
SGCE-208ENST00000450385 KIAA1210Q9ULL0 1709 aa23.26■■□□□ 1.31
SGCE-208ENST00000450385 EIF3AQ14152 1382 aaKnown RBP23.26■■□□□ 1.31
SGCE-208ENST00000450385 COL22A1Q8NFW1 1626 aaPredicted RBP23.26■■□□□ 1.31
SGCE-208ENST00000450385 FOXO3O43524 673 aa23.25■■□□□ 1.31
SGCE-208ENST00000450385 PXDNQ92626 1479 aa23.24■■□□□ 1.31
SGCE-208ENST00000450385 ADGRB2O60241 1585 aa23.24■■□□□ 1.31
SGCE-208ENST00000450385 ANKARQ7Z5J8 1434 aa23.24■■□□□ 1.31
SGCE-208ENST00000450385 PSME1Q06323 249 aa23.23■■□□□ 1.31
SGCE-208ENST00000450385 TRAK1Q9UPV9 953 aa23.23■■□□□ 1.31
SGCE-208ENST00000450385 PHF8Q9UPP1 1060 aa23.21■■□□□ 1.31
SGCE-208ENST00000450385 RGPD8O14715 1765 aaPredicted RBP23.2■■□□□ 1.3
SGCE-208ENST00000450385 AFF2P51816 1311 aa23.2■■□□□ 1.3
SGCE-208ENST00000450385 RXRBP28702 533 aa23.2■■□□□ 1.3
SGCE-208ENST00000450385 CDK12Q9NYV4 1490 aaPredicted RBP23.19■■□□□ 1.3
SGCE-208ENST00000450385 NUTM2FA1L443 756 aa23.19■■□□□ 1.3
SGCE-208ENST00000450385 NGLY1Q96IV0 654 aa23.18■■□□□ 1.3
SGCE-208ENST00000450385 C8orf37Q96NL8 207 aa23.18■■□□□ 1.3
SGCE-208ENST00000450385 SPATA31A3Q5VYP0 1347 aa23.17■■□□□ 1.3
SGCE-208ENST00000450385 SAFB2Q14151 953 aaKnown RBP eCLIP23.17■■□□□ 1.3
SGCE-208ENST00000450385 KRT28Q7Z3Y7 464 aa23.17■■□□□ 1.3
SGCE-208ENST00000450385 WASLO00401 505 aaPredicted RBP23.16■■□□□ 1.3
SGCE-208ENST00000450385 FNBP4Q8N3X1 1017 aaPredicted RBP23.16■■□□□ 1.3
SGCE-208ENST00000450385 SBNO1A3KN83 1393 aa23.15■■□□□ 1.3
SGCE-208ENST00000450385 QTRT2Q9H974 415 aaKnown RBP23.14■■□□□ 1.29
SGCE-208ENST00000450385 ARHGEF28Q8N1W1 1705 aaKnown RBP23.13■■□□□ 1.29
SGCE-208ENST00000450385 ADAMTS2O95450 1211 aa23.13■■□□□ 1.29
SGCE-208ENST00000450385 RBM6P78332 1123 aaKnown RBP23.13■■□□□ 1.29
SGCE-208ENST00000450385 MARF1Q9Y4F3 1742 aaKnown RBP23.13■■□□□ 1.29
SGCE-208ENST00000450385 TULP4Q9NRJ4 1543 aa23.12■■□□□ 1.29
SGCE-208ENST00000450385 ARHGEF10O15013 1369 aa23.11■■□□□ 1.29
SGCE-208ENST00000450385 MINK1Q8N4C8 1332 aaPredicted RBP23.1■■□□□ 1.29
SGCE-208ENST00000450385 XPCQ01831 940 aaPredicted RBP23.1■■□□□ 1.29
SGCE-208ENST00000450385 USP32Q8NFA0 1604 aa23.1■■□□□ 1.29
SGCE-208ENST00000450385 USP21Q9UK80 565 aa23.09■■□□□ 1.29
SGCE-208ENST00000450385 TRPC5Q9UL62 973 aaPredicted RBP23.09■■□□□ 1.29
SGCE-208ENST00000450385 TNS3Q68CZ2 1445 aa23.08■■□□□ 1.29
SGCE-208ENST00000450385 HIRIP3Q9BW71 556 aaPredicted RBP23.08■■□□□ 1.29
SGCE-208ENST00000450385 GPRASP1Q5JY77 1395 aa23.08■■□□□ 1.29
SGCE-208ENST00000450385 L3MBTL2Q969R5 705 aa23.07■■□□□ 1.28
SGCE-208ENST00000450385 ITSN1Q15811 1721 aa23.07■■□□□ 1.28
SGCE-208ENST00000450385 TRIM26Q12899 539 aaPredicted RBP23.04■■□□□ 1.28
SGCE-208ENST00000450385 NBPF1Q3BBV0 1214 aa23.04■■□□□ 1.28
SGCE-208ENST00000450385 PMFBP1Q8TBY8 1022 aa23.04■■□□□ 1.28
SGCE-208ENST00000450385 NUDT16Q96DE0 195 aaKnown RBP23.03■■□□□ 1.28
SGCE-208ENST00000450385 PRR36Q9H6K5 1346 aa23.03■■□□□ 1.28
SGCE-208ENST00000450385 NGDNQ8NEJ9 315 aaKnown RBP23.02■■□□□ 1.28
SGCE-208ENST00000450385 CDK19Q9BWU1 502 aa23.02■■□□□ 1.28
SGCE-208ENST00000450385 CCDC61Q9Y6R9 512 aa23.02■■□□□ 1.28
SGCE-208ENST00000450385 ATRNO75882 1429 aa23■■□□□ 1.27
SGCE-208ENST00000450385 BCL9LQ86UU0 1499 aa23■■□□□ 1.27
SGCE-208ENST00000450385 TNKS1BP1Q9C0C2 1729 aaKnown RBP23■■□□□ 1.27
SGCE-208ENST00000450385 HAP1P54257 671 aaPredicted RBP23■■□□□ 1.27
SGCE-208ENST00000450385 SIN3AQ96ST3 1273 aa23■■□□□ 1.27
SGCE-208ENST00000450385 CENPJQ9HC77 1338 aaPredicted RBP23■■□□□ 1.27
SGCE-208ENST00000450385 TRPM3Q9HCF6 1732 aaPredicted RBP22.99■■□□□ 1.27
SGCE-208ENST00000450385 ATP7BP35670 1465 aa22.98■■□□□ 1.27
SGCE-208ENST00000450385 PLEKHG3A1L390 1219 aa22.98■■□□□ 1.27
SGCE-208ENST00000450385 NEUROD1Q13562 356 aa22.98■■□□□ 1.27
SGCE-208ENST00000450385 UNC5CLQ8IV45 518 aa22.98■■□□□ 1.27
SGCE-208ENST00000450385 SLIT2O94813 1529 aa22.98■■□□□ 1.27
SGCE-208ENST00000450385 LMOD2Q6P5Q4 547 aa22.97■■□□□ 1.27
SGCE-208ENST00000450385 ALS2Q96Q42 1657 aa22.97■■□□□ 1.27
SGCE-208ENST00000450385 POLR3AO14802 1390 aaPredicted RBP22.96■■□□□ 1.27
SGCE-208ENST00000450385 TRPM1Q7Z4N2 1603 aa22.96■■□□□ 1.27
SGCE-208ENST00000450385 UPF1Q92900 1129 aaKnown RBP eCLIP22.95■■□□□ 1.26
SGCE-208ENST00000450385 NWD2Q9ULI1 1742 aa22.95■■□□□ 1.26
SGCE-208ENST00000450385 BRD4O60885 1362 aaPredicted RBP22.94■■□□□ 1.26
SGCE-208ENST00000450385 GJD4Q96KN9 370 aaPredicted RBP22.94■■□□□ 1.26
SGCE-208ENST00000450385 RGS12O14924 1447 aa22.93■■□□□ 1.26
SGCE-208ENST00000450385 ABCA3Q99758 1704 aa22.92■■□□□ 1.26
SGCE-208ENST00000450385 TOPAZ1Q8N9V7 1692 aa22.92■■□□□ 1.26
SGCE-208ENST00000450385 ROCK2O75116 1388 aaKnown RBP22.91■■□□□ 1.26
SGCE-208ENST00000450385 NBPF8Q3BBV2 869 aa22.91■■□□□ 1.26
SGCE-208ENST00000450385 SRPK2P78362 688 aaKnown RBP22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms