RNA–Protein interactions for RNA: ENST00000449880.6

ITGB4-202, Transcript of integrin subunit beta 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ITGB4, Length 5,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-202ENST00000449880 ANKRD45Q5TZF3 282 aa16.96■□□□□ 0.3
ITGB4-202ENST00000449880 MBD3O95983 291 aa16.95■□□□□ 0.3
ITGB4-202ENST00000449880 BACH2Q9BYV9 841 aa16.95■□□□□ 0.3
ITGB4-202ENST00000449880 COG6Q9Y2V7 657 aa16.95■□□□□ 0.3
ITGB4-202ENST00000449880 SLC4A10Q6U841 1118 aa16.94■□□□□ 0.3
ITGB4-202ENST00000449880 NBPF1Q3BBV0 1214 aa16.94■□□□□ 0.3
ITGB4-202ENST00000449880 CCDC141Q6ZP82 1450 aa16.94■□□□□ 0.3
ITGB4-202ENST00000449880 TPM1P09493 284 aa16.94■□□□□ 0.3
ITGB4-202ENST00000449880 TAF3Q5VWG9 929 aa16.94■□□□□ 0.3
ITGB4-202ENST00000449880 APAF1O14727 1248 aa16.93■□□□□ 0.3
ITGB4-202ENST00000449880 AKNAQ7Z591 1439 aa16.93■□□□□ 0.3
ITGB4-202ENST00000449880 FRAT2O75474 233 aaPredicted RBP16.93■□□□□ 0.3
ITGB4-202ENST00000449880 INTS3Q68E01 1043 aaKnown RBP16.93■□□□□ 0.3
ITGB4-202ENST00000449880 SCAPERQ9BY12 1400 aa16.93■□□□□ 0.3
ITGB4-202ENST00000449880 THOC2Q8NI27 1593 aaKnown RBP16.93■□□□□ 0.3
ITGB4-202ENST00000449880 NUTM2FA1L443 756 aa16.92■□□□□ 0.3
ITGB4-202ENST00000449880 DZIP1LQ8IYY4 767 aaKnown RBP16.92■□□□□ 0.3
ITGB4-202ENST00000449880 SF3A1Q15459 793 aaKnown RBP16.92■□□□□ 0.3
ITGB4-202ENST00000449880 RASSF8Q8NHQ8 419 aa16.92■□□□□ 0.3
ITGB4-202ENST00000449880 H3BQV1 296 aa16.91■□□□□ 0.3
ITGB4-202ENST00000449880 IFFO2Q5TF58 517 aa16.91■□□□□ 0.3
ITGB4-202ENST00000449880 COG3Q96JB2 828 aa16.91■□□□□ 0.3
ITGB4-202ENST00000449880 CFAP70Q5T0N1 1121 aa16.91■□□□□ 0.3
ITGB4-202ENST00000449880 CTTNBP2Q8WZ74 1663 aa16.91■□□□□ 0.3
ITGB4-202ENST00000449880 NOL8Q76FK4 1167 aaKnown RBP16.9■□□□□ 0.3
ITGB4-202ENST00000449880 CALRP27797 417 aaKnown RBP16.9■□□□□ 0.3
ITGB4-202ENST00000449880 RUFY2Q8WXA3 655 aa16.9■□□□□ 0.3
ITGB4-202ENST00000449880 ANKRD30BQ9BXX2 1392 aa16.9■□□□□ 0.3
ITGB4-202ENST00000449880 MCTP1Q6DN14 999 aa16.9■□□□□ 0.3
ITGB4-202ENST00000449880 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.9■□□□□ 0.3
ITGB4-202ENST00000449880 LTV1Q96GA3 475 aaPredicted RBP16.9■□□□□ 0.3
ITGB4-202ENST00000449880 ZNF592Q92610 1267 aa16.9■□□□□ 0.3
ITGB4-202ENST00000449880 FOXD4L5Q5VV16 416 aaPredicted RBP16.89■□□□□ 0.29
ITGB4-202ENST00000449880 FOXD4L4Q8WXT5 416 aaPredicted RBP16.89■□□□□ 0.29
ITGB4-202ENST00000449880 TSR1Q2NL82 804 aaKnown RBP16.89■□□□□ 0.29
ITGB4-202ENST00000449880 DHX8Q14562 1220 aaKnown RBP16.89■□□□□ 0.29
ITGB4-202ENST00000449880 TMEM132EQ6IEE7 984 aa16.88■□□□□ 0.29
ITGB4-202ENST00000449880 API5Q9BZZ5 524 aaKnown RBP16.88■□□□□ 0.29
ITGB4-202ENST00000449880 TOMM22Q9NS69 142 aa16.88■□□□□ 0.29
ITGB4-202ENST00000449880 FAM184AQ8NB25 1140 aa16.87■□□□□ 0.29
ITGB4-202ENST00000449880 CDC45O75419 566 aa16.86■□□□□ 0.29
ITGB4-202ENST00000449880 CIZ1Q9ULV3 898 aaPredicted RBP16.86■□□□□ 0.29
ITGB4-202ENST00000449880 GRPEL1Q9HAV7 217 aa16.86■□□□□ 0.29
ITGB4-202ENST00000449880 CCP110O43303 1012 aa16.85■□□□□ 0.29
ITGB4-202ENST00000449880 DIAPH1O60610 1272 aaKnown RBP16.85■□□□□ 0.29
ITGB4-202ENST00000449880 MCM2P49736 904 aa16.85■□□□□ 0.29
ITGB4-202ENST00000449880 SASS6Q6UVJ0 657 aa16.85■□□□□ 0.29
ITGB4-202ENST00000449880 MNS1Q8NEH6 495 aa16.85■□□□□ 0.29
ITGB4-202ENST00000449880 UBE2Q2Q8WVN8 375 aa16.85■□□□□ 0.29
ITGB4-202ENST00000449880 RUNDC1Q96C34 613 aa16.85■□□□□ 0.29
ITGB4-202ENST00000449880 IFT57Q9NWB7 429 aa16.85■□□□□ 0.29
ITGB4-202ENST00000449880 PODXL2Q9NZ53 605 aa16.85■□□□□ 0.29
ITGB4-202ENST00000449880 MARCH6O60337 910 aa16.85■□□□□ 0.29
ITGB4-202ENST00000449880 TSPY26PQ9H489 355 aa16.85■□□□□ 0.29
ITGB4-202ENST00000449880 NCOA1Q15788 1441 aa16.85■□□□□ 0.29
ITGB4-202ENST00000449880 UGGT2Q9NYU1 1516 aa16.84■□□□□ 0.29
ITGB4-202ENST00000449880 C1orf141Q5JVX7 400 aa16.84■□□□□ 0.29
ITGB4-202ENST00000449880 HOMER1Q86YM7 354 aa16.84■□□□□ 0.29
ITGB4-202ENST00000449880 CABP2Q9NPB3 220 aa16.84■□□□□ 0.29
ITGB4-202ENST00000449880 BCL2L13Q9BXK5 485 aa16.84■□□□□ 0.29
ITGB4-202ENST00000449880 RAPGEF6Q8TEU7 1601 aa16.84■□□□□ 0.29
ITGB4-202ENST00000449880 ZKSCAN1P17029 563 aaPredicted RBP16.83■□□□□ 0.29
ITGB4-202ENST00000449880 ERBINQ96RT1 1412 aa16.83■□□□□ 0.29
ITGB4-202ENST00000449880 PDE3AQ14432 1141 aa16.83■□□□□ 0.29
ITGB4-202ENST00000449880 HOOK1Q9UJC3 728 aaKnown RBP16.83■□□□□ 0.29
ITGB4-202ENST00000449880 ESPNB1AK53 854 aa16.83■□□□□ 0.28
ITGB4-202ENST00000449880 CCAR2Q8N163 923 aaKnown RBP16.83■□□□□ 0.28
ITGB4-202ENST00000449880 AK7Q96M32 723 aa16.83■□□□□ 0.28
ITGB4-202ENST00000449880 CWC22Q9HCG8 908 aaKnown RBP16.83■□□□□ 0.28
ITGB4-202ENST00000449880 CEP89Q96ST8 783 aa16.83■□□□□ 0.28
ITGB4-202ENST00000449880 ADAMTS8Q9UP79 889 aa16.83■□□□□ 0.28
ITGB4-202ENST00000449880 PPP2R1AP30153 589 aa16.82■□□□□ 0.28
ITGB4-202ENST00000449880 ERCC4Q92889 916 aaPredicted RBP16.82■□□□□ 0.28
ITGB4-202ENST00000449880 HSP90B2PQ58FF3 399 aa16.82■□□□□ 0.28
ITGB4-202ENST00000449880 RABEP1Q15276 862 aa16.82■□□□□ 0.28
ITGB4-202ENST00000449880 CAVIN1Q6NZI2 390 aaKnown RBP16.82■□□□□ 0.28
ITGB4-202ENST00000449880 RILPL2Q969X0 211 aa16.81■□□□□ 0.28
ITGB4-202ENST00000449880 LRRFIP1Q32MZ4 808 aaKnown RBP16.81■□□□□ 0.28
ITGB4-202ENST00000449880 NAT10Q9H0A0 1025 aaKnown RBP16.81■□□□□ 0.28
ITGB4-202ENST00000449880 EVA1CP58658 441 aa16.81■□□□□ 0.28
ITGB4-202ENST00000449880 TPD52L1Q16890 204 aaPredicted RBP16.81■□□□□ 0.28
ITGB4-202ENST00000449880 SMC3Q9UQE7 1217 aa16.81■□□□□ 0.28
ITGB4-202ENST00000449880 CFAP43Q8NDM7 1665 aa16.8■□□□□ 0.28
ITGB4-202ENST00000449880 CDR1P51861 262 aa16.8■□□□□ 0.28
ITGB4-202ENST00000449880 TEFQ10587 303 aa16.8■□□□□ 0.28
ITGB4-202ENST00000449880 VPS53Q5VIR6 699 aa16.79■□□□□ 0.28
ITGB4-202ENST00000449880 RNF20Q5VTR2 975 aa16.79■□□□□ 0.28
ITGB4-202ENST00000449880 ANKRD20A12PQ8NF67 263 aa16.79■□□□□ 0.28
ITGB4-202ENST00000449880 PDCL2Q8N4E4 241 aa16.79■□□□□ 0.28
ITGB4-202ENST00000449880 BICD2Q8TD16 824 aa16.79■□□□□ 0.28
ITGB4-202ENST00000449880 PRM3Q9NNZ6 103 aa16.79■□□□□ 0.28
ITGB4-202ENST00000449880 ADAMTS12P58397 1594 aa16.79■□□□□ 0.28
ITGB4-202ENST00000449880 MSH5O43196 834 aa16.79■□□□□ 0.28
ITGB4-202ENST00000449880 RIPK4P57078 832 aa16.79■□□□□ 0.28
ITGB4-202ENST00000449880 IPO7O95373 1038 aaKnown RBP16.78■□□□□ 0.28
ITGB4-202ENST00000449880 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.78■□□□□ 0.28
ITGB4-202ENST00000449880 PTPRKQ15262 1439 aa16.78■□□□□ 0.28
ITGB4-202ENST00000449880 GPATCH8Q9UKJ3 1502 aaKnown RBP16.78■□□□□ 0.28
ITGB4-202ENST00000449880 NEXNQ0ZGT2 675 aa16.78■□□□□ 0.28
ITGB4-202ENST00000449880 GGNBP2Q9H3C7 697 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms