RNA–Protein interactions for RNA: ENST00000449469.5

SNHG17-207, Transcript of small nucleolar RNA host gene 17, humanhuman

TSL 2

Gene SNHG17, Length 2,138 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG17-207ENST00000449469 SPINK5Q9NQ38 1064 aaPredicted RBP21.83■■□□□ 1.09
SNHG17-207ENST00000449469 WWC1Q8IX03 1113 aa21.83■■□□□ 1.08
SNHG17-207ENST00000449469 ZMYM3Q14202 1370 aa21.83■■□□□ 1.08
SNHG17-207ENST00000449469 MAPK8IP3Q9UPT6 1336 aa21.82■■□□□ 1.08
SNHG17-207ENST00000449469 FRMPD1Q5SYB0 1578 aa21.82■■□□□ 1.08
SNHG17-207ENST00000449469 MORC1Q86VD1 984 aa21.82■■□□□ 1.08
SNHG17-207ENST00000449469 RUNDC1Q96C34 613 aa21.82■■□□□ 1.08
SNHG17-207ENST00000449469 LAS1LQ9Y4W2 734 aaKnown RBP21.81■■□□□ 1.08
SNHG17-207ENST00000449469 CCDC27Q2M243 656 aa21.8■■□□□ 1.08
SNHG17-207ENST00000449469 WDR63Q8IWG1 891 aa21.8■■□□□ 1.08
SNHG17-207ENST00000449469 PHF23Q9BUL5 403 aaPredicted RBP21.8■■□□□ 1.08
SNHG17-207ENST00000449469 ABCC3O15438 1527 aa21.8■■□□□ 1.08
SNHG17-207ENST00000449469 BCAR3O75815 825 aa21.79■■□□□ 1.08
SNHG17-207ENST00000449469 CFAP53Q96M91 514 aa21.79■■□□□ 1.08
SNHG17-207ENST00000449469 SKAP1Q86WV1 359 aa21.77■■□□□ 1.08
SNHG17-207ENST00000449469 CLUAP1Q96AJ1 413 aa21.77■■□□□ 1.08
SNHG17-207ENST00000449469 PIK3C2BO00750 1634 aa21.77■■□□□ 1.08
SNHG17-207ENST00000449469 GLI2P10070 1586 aa21.77■■□□□ 1.08
SNHG17-207ENST00000449469 CAMSAP1Q5T5Y3 1602 aa21.76■■□□□ 1.07
SNHG17-207ENST00000449469 ANKRD36BQ8N2N9 1353 aa21.75■■□□□ 1.07
SNHG17-207ENST00000449469 CANXP27824 592 aaKnown RBP21.75■■□□□ 1.07
SNHG17-207ENST00000449469 ARHGEF28Q8N1W1 1705 aaKnown RBP21.74■■□□□ 1.07
SNHG17-207ENST00000449469 EVC2Q86UK5 1308 aa21.74■■□□□ 1.07
SNHG17-207ENST00000449469 CD109Q6YHK3 1445 aa21.74■■□□□ 1.07
SNHG17-207ENST00000449469 PMFBP1Q8TBY8 1022 aa21.73■■□□□ 1.07
SNHG17-207ENST00000449469 TRAK1Q9UPV9 953 aa21.73■■□□□ 1.07
SNHG17-207ENST00000449469 DMRT2Q9Y5R5 561 aa21.73■■□□□ 1.07
SNHG17-207ENST00000449469 ARHGAP31Q2M1Z3 1444 aa21.72■■□□□ 1.07
SNHG17-207ENST00000449469 NPM1P06748 294 aaKnown RBP eCLIP21.72■■□□□ 1.07
SNHG17-207ENST00000449469 RGS3P49796 1198 aa21.72■■□□□ 1.07
SNHG17-207ENST00000449469 ADGRB2O60241 1585 aa21.72■■□□□ 1.07
SNHG17-207ENST00000449469 ZFYVE9O95405 1425 aa21.72■■□□□ 1.07
SNHG17-207ENST00000449469 CHGAP10645 457 aaKnown RBP21.71■■□□□ 1.07
SNHG17-207ENST00000449469 NEXMIFQ5QGS0 1516 aa21.71■■□□□ 1.07
SNHG17-207ENST00000449469 NEO1Q92859 1461 aa21.71■■□□□ 1.07
SNHG17-207ENST00000449469 VGFO15240 615 aaPredicted RBP21.71■■□□□ 1.07
SNHG17-207ENST00000449469 CT47B1P0C2W7 299 aaPredicted RBP21.71■■□□□ 1.07
SNHG17-207ENST00000449469 RARSP54136 660 aaKnown RBP21.7■■□□□ 1.06
SNHG17-207ENST00000449469 TCP11L2Q8N4U5 519 aa21.7■■□□□ 1.06
SNHG17-207ENST00000449469 SLC12A5Q9H2X9 1139 aa21.7■■□□□ 1.06
SNHG17-207ENST00000449469 MYH16Q9H6N6 1097 aa21.7■■□□□ 1.06
SNHG17-207ENST00000449469 TULP4Q9NRJ4 1543 aa21.7■■□□□ 1.06
SNHG17-207ENST00000449469 NFKBIBQ15653 356 aa21.68■■□□□ 1.06
SNHG17-207ENST00000449469 IGHDP01880 384 aa21.67■■□□□ 1.06
SNHG17-207ENST00000449469 MTHFSP49914 203 aa21.66■■□□□ 1.06
SNHG17-207ENST00000449469 COG6Q9Y2V7 657 aa21.65■■□□□ 1.06
SNHG17-207ENST00000449469 MED14O60244 1454 aa21.64■■□□□ 1.06
SNHG17-207ENST00000449469 SIGLEC1Q9BZZ2 1709 aa21.64■■□□□ 1.06
SNHG17-207ENST00000449469 GGT6Q6P531 493 aa21.64■■□□□ 1.05
SNHG17-207ENST00000449469 PANK1Q8TE04 598 aa21.64■■□□□ 1.05
SNHG17-207ENST00000449469 ABCC11Q96J66 1382 aa21.63■■□□□ 1.05
SNHG17-207ENST00000449469 GSE1Q14687 1217 aa21.62■■□□□ 1.05
SNHG17-207ENST00000449469 DIP2CQ9Y2E4 1556 aa21.61■■□□□ 1.05
SNHG17-207ENST00000449469 BECN1Q14457 450 aa21.61■■□□□ 1.05
SNHG17-207ENST00000449469 TMEM132EQ6IEE7 984 aa21.61■■□□□ 1.05
SNHG17-207ENST00000449469 ANKRD26Q9UPS8 1709 aa21.61■■□□□ 1.05
SNHG17-207ENST00000449469 ATAD2Q6PL18 1390 aa21.6■■□□□ 1.05
SNHG17-207ENST00000449469 FRAT1Q92837 279 aaPredicted RBP21.6■■□□□ 1.05
SNHG17-207ENST00000449469 RWDD1Q9H446 243 aaPredicted RBP21.6■■□□□ 1.05
SNHG17-207ENST00000449469 SLC52A1Q9NWF4 448 aa21.6■■□□□ 1.05
SNHG17-207ENST00000449469 CFAP65Q6ZU64 1925 aaKnown RBP21.59■■□□□ 1.05
SNHG17-207ENST00000449469 CLTCQ00610 1675 aaKnown RBP21.59■■□□□ 1.05
SNHG17-207ENST00000449469 TNNT2P45379 298 aaPredicted RBP21.59■■□□□ 1.05
SNHG17-207ENST00000449469 UPF2Q9HAU5 1272 aaKnown RBP21.58■■□□□ 1.05
SNHG17-207ENST00000449469 USP19O94966 1318 aa21.58■■□□□ 1.05
SNHG17-207ENST00000449469 NEUROD2Q15784 382 aa21.58■■□□□ 1.04
SNHG17-207ENST00000449469 IL16Q14005 1332 aa21.57■■□□□ 1.04
SNHG17-207ENST00000449469 RRP7AQ9Y3A4 280 aaKnown RBP21.57■■□□□ 1.04
SNHG17-207ENST00000449469 NLRP1Q9C000 1473 aa21.57■■□□□ 1.04
SNHG17-207ENST00000449469 SLC4A3P48751 1232 aa21.56■■□□□ 1.04
SNHG17-207ENST00000449469 U2AF1L5P0DN76 240 aaPredicted RBP21.55■■□□□ 1.04
SNHG17-207ENST00000449469 U2AF1Q01081 240 aaKnown RBP eCLIP21.55■■□□□ 1.04
SNHG17-207ENST00000449469 ZKSCAN2Q63HK3 967 aa21.55■■□□□ 1.04
SNHG17-207ENST00000449469 COL3A1P02461 1466 aaPredicted RBP21.55■■□□□ 1.04
SNHG17-207ENST00000449469 MVPQ14764 893 aaKnown RBP21.55■■□□□ 1.04
SNHG17-207ENST00000449469 PNNQ9H307 717 aaKnown RBP21.54■■□□□ 1.04
SNHG17-207ENST00000449469 A0A1W2PP64 1363 aa21.54■■□□□ 1.04
SNHG17-207ENST00000449469 RLBP1P12271 317 aa21.52■■□□□ 1.04
SNHG17-207ENST00000449469 RICTORQ6R327 1708 aa21.52■■□□□ 1.04
SNHG17-207ENST00000449469 TERF2IPQ9NYB0 399 aa21.52■■□□□ 1.04
SNHG17-207ENST00000449469 PCDHB15Q9Y5E8 787 aa21.52■■□□□ 1.04
SNHG17-207ENST00000449469 PTPRMP28827 1452 aa21.51■■□□□ 1.03
SNHG17-207ENST00000449469 TMEM131LA2VDJ0 1609 aa21.5■■□□□ 1.03
SNHG17-207ENST00000449469 DZIP1LQ8IYY4 767 aaKnown RBP21.5■■□□□ 1.03
SNHG17-207ENST00000449469 FTSJ3Q8IY81 847 aaKnown RBP21.5■■□□□ 1.03
SNHG17-207ENST00000449469 PLEKHF1Q96S99 279 aa21.5■■□□□ 1.03
SNHG17-207ENST00000449469 PREX1Q8TCU6 1659 aa21.5■■□□□ 1.03
SNHG17-207ENST00000449469 PDZRN3Q9UPQ7 1066 aa21.49■■□□□ 1.03
SNHG17-207ENST00000449469 CDC42BPGQ6DT37 1551 aa21.49■■□□□ 1.03
SNHG17-207ENST00000449469 CABP2Q9NPB3 220 aa21.49■■□□□ 1.03
SNHG17-207ENST00000449469 TBC1D32Q96NH3 1257 aa21.48■■□□□ 1.03
SNHG17-207ENST00000449469 IDI1Q13907 227 aa21.47■■□□□ 1.03
SNHG17-207ENST00000449469 DDX19BQ9UMR2 479 aa21.47■■□□□ 1.03
SNHG17-207ENST00000449469 TMPOP42166 694 aaKnown RBP21.47■■□□□ 1.03
SNHG17-207ENST00000449469 HDAC1Q13547 482 aaPredicted RBP21.47■■□□□ 1.03
SNHG17-207ENST00000449469 OSCARQ8IYS5 282 aa21.47■■□□□ 1.03
SNHG17-207ENST00000449469 PNPLA6Q8IY17 1366 aa21.46■■□□□ 1.03
SNHG17-207ENST00000449469 YTHDC2Q9H6S0 1430 aaKnown RBP21.46■■□□□ 1.03
SNHG17-207ENST00000449469 SRPK2P78362 688 aaKnown RBP21.46■■□□□ 1.03
SNHG17-207ENST00000449469 CD163L1Q9NR16 1453 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms