RNA–Protein interactions for RNA: ENST00000448471.2

CDK3-202, Transcript of cyclin dependent kinase 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDK3, Length 1,570 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3-202ENST00000448471 USP21Q9UK80 565 aa21.08■□□□□ 0.97
CDK3-202ENST00000448471 ROBO2Q9HCK4 1378 aa21.07■□□□□ 0.96
CDK3-202ENST00000448471 TRPC5Q9UL62 973 aaPredicted RBP21.06■□□□□ 0.96
CDK3-202ENST00000448471 TIMELESSQ9UNS1 1208 aa21.04■□□□□ 0.96
CDK3-202ENST00000448471 KIF1BO60333 1816 aa21.04■□□□□ 0.96
CDK3-202ENST00000448471 FNBP4Q8N3X1 1017 aaPredicted RBP21.03■□□□□ 0.96
CDK3-202ENST00000448471 PRAG1Q86YV5 1406 aa21.03■□□□□ 0.96
CDK3-202ENST00000448471 VGFO15240 615 aaPredicted RBP21.02■□□□□ 0.96
CDK3-202ENST00000448471 ATRNO75882 1429 aa21.02■□□□□ 0.96
CDK3-202ENST00000448471 COL22A1Q8NFW1 1626 aaPredicted RBP21.02■□□□□ 0.96
CDK3-202ENST00000448471 MYOM2P54296 1465 aa20.99■□□□□ 0.95
CDK3-202ENST00000448471 FOXD1Q16676 465 aa20.97■□□□□ 0.95
CDK3-202ENST00000448471 ZRANB1Q9UGI0 708 aa20.97■□□□□ 0.95
CDK3-202ENST00000448471 NPHP3Q7Z494 1330 aa20.96■□□□□ 0.95
CDK3-202ENST00000448471 ESCO1Q5FWF5 840 aa20.96■□□□□ 0.95
CDK3-202ENST00000448471 MPHOSPH9Q99550 1183 aa20.96■□□□□ 0.95
CDK3-202ENST00000448471 RPGRIP1LQ68CZ1 1315 aa20.95■□□□□ 0.95
CDK3-202ENST00000448471 CDC42BPGQ6DT37 1551 aa20.95■□□□□ 0.94
CDK3-202ENST00000448471 BCL9LQ86UU0 1499 aa20.94■□□□□ 0.94
CDK3-202ENST00000448471 PXDNQ92626 1479 aa20.94■□□□□ 0.94
CDK3-202ENST00000448471 SIN3AQ96ST3 1273 aa20.93■□□□□ 0.94
CDK3-202ENST00000448471 PPLO60437 1756 aa20.91■□□□□ 0.94
CDK3-202ENST00000448471 XPCQ01831 940 aaPredicted RBP20.91■□□□□ 0.94
CDK3-202ENST00000448471 CCDC125Q86Z20 511 aa20.91■□□□□ 0.94
CDK3-202ENST00000448471 FOXO3O43524 673 aa20.9■□□□□ 0.94
CDK3-202ENST00000448471 MARF1Q9Y4F3 1742 aaKnown RBP20.9■□□□□ 0.94
CDK3-202ENST00000448471 ZNF316A6NFI3 1004 aaPredicted RBP20.89■□□□□ 0.94
CDK3-202ENST00000448471 GJD4Q96KN9 370 aaPredicted RBP20.89■□□□□ 0.94
CDK3-202ENST00000448471 NEUROD1Q13562 356 aa20.89■□□□□ 0.93
CDK3-202ENST00000448471 SRCAPQ6ZRS2 3230 aa20.88■□□□□ 0.93
CDK3-202ENST00000448471 LRPPRCP42704 1394 aaKnown RBP20.88■□□□□ 0.93
CDK3-202ENST00000448471 NUTM2FA1L443 756 aa20.86■□□□□ 0.93
CDK3-202ENST00000448471 SLC4A1APQ9BWU0 796 aaKnown RBP20.86■□□□□ 0.93
CDK3-202ENST00000448471 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.85■□□□□ 0.93
CDK3-202ENST00000448471 ANKRD30BQ9BXX2 1392 aa20.84■□□□□ 0.93
CDK3-202ENST00000448471 ADGRF5Q8IZF2 1346 aa20.84■□□□□ 0.93
CDK3-202ENST00000448471 WAPLQ7Z5K2 1190 aa20.84■□□□□ 0.93
CDK3-202ENST00000448471 STK26Q9P289 416 aa20.84■□□□□ 0.93
CDK3-202ENST00000448471 SLIT2O94813 1529 aa20.83■□□□□ 0.93
CDK3-202ENST00000448471 RALGAPBQ86X10 1494 aa20.83■□□□□ 0.93
CDK3-202ENST00000448471 TECPR2O15040 1411 aa20.83■□□□□ 0.93
CDK3-202ENST00000448471 UNC5CLQ8IV45 518 aa20.83■□□□□ 0.92
CDK3-202ENST00000448471 GLI3P10071 1580 aa20.83■□□□□ 0.92
CDK3-202ENST00000448471 TONSLQ96HA7 1378 aa20.82■□□□□ 0.92
CDK3-202ENST00000448471 BLMP54132 1417 aaPredicted RBP20.82■□□□□ 0.92
CDK3-202ENST00000448471 EP400Q96L91 3159 aa20.81■□□□□ 0.92
CDK3-202ENST00000448471 SPATA31A3Q5VYP0 1347 aa20.81■□□□□ 0.92
CDK3-202ENST00000448471 PLEKHH1Q9ULM0 1364 aa20.8■□□□□ 0.92
CDK3-202ENST00000448471 CCDC144AA2RUR9 1427 aa20.79■□□□□ 0.92
CDK3-202ENST00000448471 ABCC11Q96J66 1382 aa20.79■□□□□ 0.92
CDK3-202ENST00000448471 KIF1AQ12756 1690 aa20.78■□□□□ 0.92
CDK3-202ENST00000448471 USP32Q8NFA0 1604 aa20.78■□□□□ 0.92
CDK3-202ENST00000448471 FMN2Q9NZ56 1722 aa20.78■□□□□ 0.92
CDK3-202ENST00000448471 KNDC1Q76NI1 1749 aa20.77■□□□□ 0.92
CDK3-202ENST00000448471 TMEM132EQ6IEE7 984 aa20.77■□□□□ 0.92
CDK3-202ENST00000448471 RGL3Q3MIN7 710 aa20.76■□□□□ 0.91
CDK3-202ENST00000448471 KRT28Q7Z3Y7 464 aa20.76■□□□□ 0.91
CDK3-202ENST00000448471 DEFB132Q7Z7B7 95 aa20.76■□□□□ 0.91
CDK3-202ENST00000448471 SPATA31E1Q6ZUB1 1445 aa20.74■□□□□ 0.91
CDK3-202ENST00000448471 HAP1P54257 671 aaPredicted RBP20.74■□□□□ 0.91
CDK3-202ENST00000448471 SF3B2Q13435 895 aaKnown RBP20.74■□□□□ 0.91
CDK3-202ENST00000448471 SEPT12Q8IYM1 358 aa20.74■□□□□ 0.91
CDK3-202ENST00000448471 IFT172Q9UG01 1749 aa20.74■□□□□ 0.91
CDK3-202ENST00000448471 BRWD3Q6RI45 1802 aa20.73■□□□□ 0.91
CDK3-202ENST00000448471 PIK3C2GO75747 1445 aa20.73■□□□□ 0.91
CDK3-202ENST00000448471 TNS3Q68CZ2 1445 aa20.73■□□□□ 0.91
CDK3-202ENST00000448471 YTHDC2Q9H6S0 1430 aaKnown RBP20.73■□□□□ 0.91
CDK3-202ENST00000448471 VPS72Q15906 364 aa20.72■□□□□ 0.91
CDK3-202ENST00000448471 CABLES1Q8TDN4 633 aa20.71■□□□□ 0.91
CDK3-202ENST00000448471 PLEKHG5O94827 1062 aa20.7■□□□□ 0.9
CDK3-202ENST00000448471 PSME1Q06323 249 aa20.7■□□□□ 0.9
CDK3-202ENST00000448471 PHF8Q9UPP1 1060 aa20.7■□□□□ 0.9
CDK3-202ENST00000448471 CCDC9Q9Y3X0 531 aaKnown RBP20.7■□□□□ 0.9
CDK3-202ENST00000448471 PLCH1Q4KWH8 1693 aa20.69■□□□□ 0.9
CDK3-202ENST00000448471 DIEXFQ68CQ4 756 aaKnown RBP20.68■□□□□ 0.9
CDK3-202ENST00000448471 NWD2Q9ULI1 1742 aa20.68■□□□□ 0.9
CDK3-202ENST00000448471 ONECUT3O60422 494 aaPredicted RBP20.68■□□□□ 0.9
CDK3-202ENST00000448471 KRT27Q7Z3Y8 459 aa20.68■□□□□ 0.9
CDK3-202ENST00000448471 SIRT1Q96EB6 747 aa20.68■□□□□ 0.9
CDK3-202ENST00000448471 SBNO1A3KN83 1393 aa20.67■□□□□ 0.9
CDK3-202ENST00000448471 NRXN1Q9ULB1 1477 aa20.66■□□□□ 0.9
CDK3-202ENST00000448471 ABCA3Q99758 1704 aa20.66■□□□□ 0.9
CDK3-202ENST00000448471 LMOD2Q6P5Q4 547 aa20.66■□□□□ 0.9
CDK3-202ENST00000448471 LRP5O75197 1615 aa20.66■□□□□ 0.9
CDK3-202ENST00000448471 ARHGEF10O15013 1369 aa20.65■□□□□ 0.9
CDK3-202ENST00000448471 RGPD8O14715 1765 aaPredicted RBP20.65■□□□□ 0.9
CDK3-202ENST00000448471 A0A0G2JS52 829 aa20.63■□□□□ 0.89
CDK3-202ENST00000448471 MYT1Q01538 1121 aa20.63■□□□□ 0.89
CDK3-202ENST00000448471 C14orf93Q9H972 538 aaKnown RBP20.63■□□□□ 0.89
CDK3-202ENST00000448471 FAM83GA6ND36 823 aa20.62■□□□□ 0.89
CDK3-202ENST00000448471 L3MBTL2Q969R5 705 aa20.62■□□□□ 0.89
CDK3-202ENST00000448471 BAG6P46379 1132 aa20.61■□□□□ 0.89
CDK3-202ENST00000448471 SAFB2Q14151 953 aaKnown RBP eCLIP20.61■□□□□ 0.89
CDK3-202ENST00000448471 PSDA5PKW4 1024 aaPredicted RBP20.6■□□□□ 0.89
CDK3-202ENST00000448471 CFAP70Q5T0N1 1121 aa20.6■□□□□ 0.89
CDK3-202ENST00000448471 PRAM1Q96QH2 718 aa20.6■□□□□ 0.89
CDK3-202ENST00000448471 PMFBP1Q8TBY8 1022 aa20.59■□□□□ 0.89
CDK3-202ENST00000448471 FAM98CQ17RN3 349 aaKnown RBP20.59■□□□□ 0.89
CDK3-202ENST00000448471 NRAPQ86VF7 1730 aa20.58■□□□□ 0.89
CDK3-202ENST00000448471 ANKARQ7Z5J8 1434 aa20.58■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms