RNA–Protein interactions for RNA: ENST00000448327.1

LINC01564-201, Transcript of long intergenic non-protein coding RNA 1564, humanhuman

TSL 3 BASIC

Gene LINC01564, Length 566 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01564-201ENST00000448327 MSS51Q4VC12 460 aa8.4□□□□□ -1.06
LINC01564-201ENST00000448327 BRICD5Q6PL45 260 aa8.4□□□□□ -1.06
LINC01564-201ENST00000448327 RNF19BQ6ZMZ0 732 aa8.4□□□□□ -1.06
LINC01564-201ENST00000448327 SNIP1Q8TAD8 396 aaKnown RBP8.4□□□□□ -1.06
LINC01564-201ENST00000448327 ATP13A2Q9NQ11 1180 aa8.4□□□□□ -1.06
LINC01564-201ENST00000448327 SMPD1P17405 629 aa8.39□□□□□ -1.07
LINC01564-201ENST00000448327 TRIM32Q13049 653 aa8.39□□□□□ -1.07
LINC01564-201ENST00000448327 SMYD5Q6GMV2 418 aa8.39□□□□□ -1.07
LINC01564-201ENST00000448327 WIPF1O43516 503 aa8.38□□□□□ -1.07
LINC01564-201ENST00000448327 SNRPBP14678 240 aaKnown RBP8.38□□□□□ -1.07
LINC01564-201ENST00000448327 SENP2Q9HC62 589 aa8.38□□□□□ -1.07
LINC01564-201ENST00000448327 MRGPRX2Q96LB1 330 aa8.37□□□□□ -1.07
LINC01564-201ENST00000448327 J3QL48 77 aa8.36□□□□□ -1.07
LINC01564-201ENST00000448327 TERTO14746 1132 aaKnown RBP8.36□□□□□ -1.07
LINC01564-201ENST00000448327 Q3C1V9 767 aa8.36□□□□□ -1.07
LINC01564-201ENST00000448327 TRIM47Q96LD4 638 aa8.36□□□□□ -1.07
LINC01564-201ENST00000448327 REPIN1Q9BWE0 567 aaKnown RBP8.35□□□□□ -1.07
LINC01564-201ENST00000448327 TESPA1A2RU30 521 aaPredicted RBP8.33□□□□□ -1.08
LINC01564-201ENST00000448327 CCDC24Q8N4L8 307 aa8.33□□□□□ -1.08
LINC01564-201ENST00000448327 HPS1Q92902 700 aa8.33□□□□□ -1.08
LINC01564-201ENST00000448327 KIFC2Q96AC6 838 aa8.33□□□□□ -1.08
LINC01564-201ENST00000448327 MMP16P51512 607 aa8.32□□□□□ -1.08
LINC01564-201ENST00000448327 PHOX2BQ99453 314 aa8.32□□□□□ -1.08
LINC01564-201ENST00000448327 GPR37O15354 613 aa8.31□□□□□ -1.08
LINC01564-201ENST00000448327 USB1Q9BQ65 265 aaKnown RBP8.31□□□□□ -1.08
LINC01564-201ENST00000448327 SLC16A10Q8TF71 515 aa8.3□□□□□ -1.08
LINC01564-201ENST00000448327 RC3H1Q5TC82 1133 aaKnown RBP8.29□□□□□ -1.08
LINC01564-201ENST00000448327 FAM181BA6NEQ2 426 aa8.28□□□□□ -1.08
LINC01564-201ENST00000448327 DXOO77932 396 aaKnown RBP8.28□□□□□ -1.08
LINC01564-201ENST00000448327 ALDH1A1P00352 501 aa8.28□□□□□ -1.08
LINC01564-201ENST00000448327 LCE2CQ5TA81 110 aa8.28□□□□□ -1.08
LINC01564-201ENST00000448327 KDM4AO75164 1064 aa8.27□□□□□ -1.09
LINC01564-201ENST00000448327 GPIHBP1Q8IV16 184 aa8.27□□□□□ -1.09
LINC01564-201ENST00000448327 WNT7BP56706 349 aa8.26□□□□□ -1.09
LINC01564-201ENST00000448327 CD46P15529 392 aa8.25□□□□□ -1.09
LINC01564-201ENST00000448327 SKOR1P84550 965 aa8.24□□□□□ -1.09
LINC01564-201ENST00000448327 NXF1Q9UBU9 619 aaKnown RBP8.24□□□□□ -1.09
LINC01564-201ENST00000448327 HLA-CQ95604 372 aa8.23□□□□□ -1.09
LINC01564-201ENST00000448327 BMP1P13497 986 aa8.22□□□□□ -1.09
LINC01564-201ENST00000448327 USP46P62068 366 aa8.22□□□□□ -1.09
LINC01564-201ENST00000448327 EHBP1Q8NDI1 1231 aa8.22□□□□□ -1.09
LINC01564-201ENST00000448327 IRF7Q92985 503 aa8.22□□□□□ -1.09
LINC01564-201ENST00000448327 WASF2Q9Y6W5 498 aa8.22□□□□□ -1.09
LINC01564-201ENST00000448327 CAPN5O15484 640 aaPredicted RBP8.21□□□□□ -1.1
LINC01564-201ENST00000448327 GMPRP36959 345 aa8.2□□□□□ -1.1
LINC01564-201ENST00000448327 ZSCAN1Q8NBB4 408 aa8.2□□□□□ -1.1
LINC01564-201ENST00000448327 HOXA2O43364 376 aa8.19□□□□□ -1.1
LINC01564-201ENST00000448327 JUNDP17535 347 aa8.19□□□□□ -1.1
LINC01564-201ENST00000448327 VEGFBP49765 207 aa8.19□□□□□ -1.1
LINC01564-201ENST00000448327 MDM2Q00987 491 aaPredicted RBP8.19□□□□□ -1.1
LINC01564-201ENST00000448327 GUCA2AQ02747 115 aa8.18□□□□□ -1.1
LINC01564-201ENST00000448327 NUDT12Q9BQG2 462 aa8.18□□□□□ -1.1
LINC01564-201ENST00000448327 MAP2K5Q13163 448 aa8.17□□□□□ -1.1
LINC01564-201ENST00000448327 TRIM46Q7Z4K8 759 aa8.17□□□□□ -1.1
LINC01564-201ENST00000448327 NPAS3Q8IXF0 933 aa8.17□□□□□ -1.1
LINC01564-201ENST00000448327 SYMPKQ92797 1274 aaKnown RBP8.17□□□□□ -1.1
LINC01564-201ENST00000448327 SIAH2O43255 324 aa8.15□□□□□ -1.1
LINC01564-201ENST00000448327 H3BM21 787 aa8.14□□□□□ -1.11
LINC01564-201ENST00000448327 PTCRAQ6ISU1 281 aaPredicted RBP8.14□□□□□ -1.11
LINC01564-201ENST00000448327 RETREG3Q86VR2 466 aa8.14□□□□□ -1.11
LINC01564-201ENST00000448327 NUTM1Q86Y26 1132 aa8.14□□□□□ -1.11
LINC01564-201ENST00000448327 IRF6O14896 467 aa8.13□□□□□ -1.11
LINC01564-201ENST00000448327 C6orf229H3BNL8 230 aa8.12□□□□□ -1.11
LINC01564-201ENST00000448327 KRI1Q8N9T8 703 aaKnown RBP8.12□□□□□ -1.11
LINC01564-201ENST00000448327 ZFP42Q96MM3 310 aa8.12□□□□□ -1.11
LINC01564-201ENST00000448327 ERBB4Q15303 1308 aa8.11□□□□□ -1.11
LINC01564-201ENST00000448327 CCNYL3P0C7X3 344 aa8.11□□□□□ -1.11
LINC01564-201ENST00000448327 MS4A1P11836 297 aa8.11□□□□□ -1.11
LINC01564-201ENST00000448327 SH3BP2P78314 561 aa8.11□□□□□ -1.11
LINC01564-201ENST00000448327 TULP1O00294 542 aaPredicted RBP8.1□□□□□ -1.11
LINC01564-201ENST00000448327 LINC01559Q495D7 138 aa8.1□□□□□ -1.11
LINC01564-201ENST00000448327 GPCPD1Q9NPB8 672 aa8.1□□□□□ -1.11
LINC01564-201ENST00000448327 TLL2Q9Y6L7 1015 aa8.1□□□□□ -1.11
LINC01564-201ENST00000448327 PLEKHG3A1L390 1219 aa8.09□□□□□ -1.11
LINC01564-201ENST00000448327 FDX1P10109 184 aa8.09□□□□□ -1.11
LINC01564-201ENST00000448327 LORP23490 312 aaPredicted RBP8.09□□□□□ -1.11
LINC01564-201ENST00000448327 CLCN1P35523 988 aa8.09□□□□□ -1.11
LINC01564-201ENST00000448327 SCARF1Q14162 830 aa8.09□□□□□ -1.11
LINC01564-201ENST00000448327 MINK1Q8N4C8 1332 aaPredicted RBP8.08□□□□□ -1.12
LINC01564-201ENST00000448327 UNC93B1Q9H1C4 597 aa8.08□□□□□ -1.12
LINC01564-201ENST00000448327 NNTQ13423 1086 aa8.07□□□□□ -1.12
LINC01564-201ENST00000448327 MRPL14Q6P1L8 145 aaKnown RBP8.07□□□□□ -1.12
LINC01564-201ENST00000448327 BAP1Q92560 729 aa8.07□□□□□ -1.12
LINC01564-201ENST00000448327 CCDC102AQ96A19 550 aa8.07□□□□□ -1.12
LINC01564-201ENST00000448327 FAM217BQ9NTX9 383 aaPredicted RBP8.07□□□□□ -1.12
LINC01564-201ENST00000448327 PURBQ96QR8 312 aaKnown RBP8.06□□□□□ -1.12
LINC01564-201ENST00000448327 VARSP26640 1264 aaKnown RBP8.05□□□□□ -1.12
LINC01564-201ENST00000448327 PTPRNQ16849 979 aa8.05□□□□□ -1.12
LINC01564-201ENST00000448327 PCDHGC3Q9UN70 934 aa8.05□□□□□ -1.12
LINC01564-201ENST00000448327 SOBPA7XYQ1 873 aa8.04□□□□□ -1.12
LINC01564-201ENST00000448327 ADH1CP00326 375 aa8.04□□□□□ -1.12
LINC01564-201ENST00000448327 WDR4P57081 412 aaKnown RBP8.04□□□□□ -1.12
LINC01564-201ENST00000448327 ZNF511Q8NB15 262 aa8.04□□□□□ -1.12
LINC01564-201ENST00000448327 EVA1BQ9NVM1 165 aa8.04□□□□□ -1.12
LINC01564-201ENST00000448327 PLCB2Q00722 1185 aa8.03□□□□□ -1.12
LINC01564-201ENST00000448327 KCNH2Q12809 1159 aa8.03□□□□□ -1.12
LINC01564-201ENST00000448327 TIMP2P16035 220 aa8.02□□□□□ -1.13
LINC01564-201ENST00000448327 LOC100996750A0A140TA64 210 aa8.01□□□□□ -1.13
LINC01564-201ENST00000448327 MAN1A2O60476 641 aa8.01□□□□□ -1.13
LINC01564-201ENST00000448327 PRR7Q8TB68 274 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms