RNA–Protein interactions for RNA: ENST00000444415.7

TRAF4-205, Transcript of TNF receptor associated factor 4, humanhuman

TSL 5 BASIC

Gene TRAF4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-205ENST00000444415 MED1Q15648 1581 aaPredicted RBP31.73■■■□□ 2.67
TRAF4-205ENST00000444415 NHSL1Q5SYE7 1610 aa31.73■■■□□ 2.67
TRAF4-205ENST00000444415 SIRT1Q96EB6 747 aa31.72■■■□□ 2.67
TRAF4-205ENST00000444415 L3MBTL2Q969R5 705 aa31.71■■■□□ 2.67
TRAF4-205ENST00000444415 ARHGEF28Q8N1W1 1705 aaKnown RBP31.68■■■□□ 2.66
TRAF4-205ENST00000444415 FMN2Q9NZ56 1722 aa31.68■■■□□ 2.66
TRAF4-205ENST00000444415 NEUROD1Q13562 356 aa31.66■■■□□ 2.66
TRAF4-205ENST00000444415 PRAM1Q96QH2 718 aa31.65■■■□□ 2.66
TRAF4-205ENST00000444415 TRAK1Q9UPV9 953 aa31.65■■■□□ 2.66
TRAF4-205ENST00000444415 DISP3Q9P2K9 1392 aa31.64■■■□□ 2.66
TRAF4-205ENST00000444415 ORAI2Q96SN7 254 aa31.63■■■□□ 2.65
TRAF4-205ENST00000444415 DDX17Q92841 729 aaKnown RBP31.62■■■□□ 2.65
TRAF4-205ENST00000444415 ADGRB2O60241 1585 aa31.62■■■□□ 2.65
TRAF4-205ENST00000444415 SAFB2Q14151 953 aaKnown RBP eCLIP31.6■■■□□ 2.65
TRAF4-205ENST00000444415 NBPF1Q3BBV0 1214 aa31.6■■■□□ 2.65
TRAF4-205ENST00000444415 RGPD8O14715 1765 aaPredicted RBP31.59■■■□□ 2.65
TRAF4-205ENST00000444415 TRPM1Q7Z4N2 1603 aa31.59■■■□□ 2.65
TRAF4-205ENST00000444415 SHPRHQ149N8 1683 aa31.57■■■□□ 2.64
TRAF4-205ENST00000444415 JCADQ9P266 1359 aa31.56■■■□□ 2.64
TRAF4-205ENST00000444415 USP32Q8NFA0 1604 aa31.55■■■□□ 2.64
TRAF4-205ENST00000444415 PCGF6Q9BYE7 350 aa31.55■■■□□ 2.64
TRAF4-205ENST00000444415 NUTM2FA1L443 756 aa31.54■■■□□ 2.64
TRAF4-205ENST00000444415 POGKQ9P215 609 aa31.52■■■□□ 2.64
TRAF4-205ENST00000444415 LRP6O75581 1613 aa31.48■■■□□ 2.63
TRAF4-205ENST00000444415 NBPF8Q3BBV2 869 aa31.48■■■□□ 2.63
TRAF4-205ENST00000444415 HIRIP3Q9BW71 556 aaPredicted RBP31.48■■■□□ 2.63
TRAF4-205ENST00000444415 SOS2Q07890 1332 aaPredicted RBP31.47■■■□□ 2.63
TRAF4-205ENST00000444415 MINK1Q8N4C8 1332 aaPredicted RBP31.47■■■□□ 2.63
TRAF4-205ENST00000444415 ESCO1Q5FWF5 840 aa31.47■■■□□ 2.63
TRAF4-205ENST00000444415 PXDNQ92626 1479 aa31.46■■■□□ 2.63
TRAF4-205ENST00000444415 KIF1AQ12756 1690 aa31.45■■■□□ 2.63
TRAF4-205ENST00000444415 ILDR2Q71H61 639 aa31.45■■■□□ 2.62
TRAF4-205ENST00000444415 TULP4Q9NRJ4 1543 aa31.42■■■□□ 2.62
TRAF4-205ENST00000444415 PNPLA6Q8IY17 1366 aa31.41■■■□□ 2.62
TRAF4-205ENST00000444415 TONSLQ96HA7 1378 aa31.41■■■□□ 2.62
TRAF4-205ENST00000444415 ANKARQ7Z5J8 1434 aa31.41■■■□□ 2.62
TRAF4-205ENST00000444415 PRR36Q9H6K5 1346 aa31.41■■■□□ 2.62
TRAF4-205ENST00000444415 FOXO3O43524 673 aa31.39■■■□□ 2.62
TRAF4-205ENST00000444415 LRRC59Q96AG4 307 aaKnown RBP31.39■■■□□ 2.62
TRAF4-205ENST00000444415 RGS17Q9UGC6 210 aaPredicted RBP31.39■■■□□ 2.62
TRAF4-205ENST00000444415 SPATA31A6Q5VVP1 1343 aa31.38■■■□□ 2.61
TRAF4-205ENST00000444415 QRICH2Q9H0J4 1663 aa31.38■■■□□ 2.61
TRAF4-205ENST00000444415 WASLO00401 505 aaPredicted RBP31.38■■■□□ 2.61
TRAF4-205ENST00000444415 NPHP3Q7Z494 1330 aa31.38■■■□□ 2.61
TRAF4-205ENST00000444415 GPRASP1Q5JY77 1395 aa31.37■■■□□ 2.61
TRAF4-205ENST00000444415 ATP7BP35670 1465 aa31.36■■■□□ 2.61
TRAF4-205ENST00000444415 ROCK2O75116 1388 aaKnown RBP31.36■■■□□ 2.61
TRAF4-205ENST00000444415 XPCQ01831 940 aaPredicted RBP31.35■■■□□ 2.61
TRAF4-205ENST00000444415 COL22A1Q8NFW1 1626 aaPredicted RBP31.34■■■□□ 2.61
TRAF4-205ENST00000444415 RALGAPBQ86X10 1494 aa31.33■■■□□ 2.61
TRAF4-205ENST00000444415 PHF8Q9UPP1 1060 aa31.33■■■□□ 2.61
TRAF4-205ENST00000444415 TOPAZ1Q8N9V7 1692 aa31.31■■■□□ 2.6
TRAF4-205ENST00000444415 CENPJQ9HC77 1338 aaPredicted RBP31.31■■■□□ 2.6
TRAF4-205ENST00000444415 PHF23Q9BUL5 403 aaPredicted RBP31.3■■■□□ 2.6
TRAF4-205ENST00000444415 ITSN1Q15811 1721 aa31.29■■■□□ 2.6
TRAF4-205ENST00000444415 EIF3AQ14152 1382 aaKnown RBP31.29■■■□□ 2.6
TRAF4-205ENST00000444415 PMFBP1Q8TBY8 1022 aa31.27■■■□□ 2.6
TRAF4-205ENST00000444415 TRPM3Q9HCF6 1732 aaPredicted RBP31.27■■■□□ 2.6
TRAF4-205ENST00000444415 CDK19Q9BWU1 502 aa31.27■■■□□ 2.6
TRAF4-205ENST00000444415 NUTM2BA6NNL0 878 aaPredicted RBP31.25■■■□□ 2.59
TRAF4-205ENST00000444415 NUTM2EB1AL46 878 aaPredicted RBP31.25■■■□□ 2.59
TRAF4-205ENST00000444415 NUTM2AQ8IVF1 878 aaPredicted RBP31.25■■■□□ 2.59
TRAF4-205ENST00000444415 CLSPNQ9HAW4 1339 aa31.23■■■□□ 2.59
TRAF4-205ENST00000444415 KRT28Q7Z3Y7 464 aa31.23■■■□□ 2.59
TRAF4-205ENST00000444415 SPATA31A3Q5VYP0 1347 aa31.23■■■□□ 2.59
TRAF4-205ENST00000444415 NUDT16Q96DE0 195 aaKnown RBP31.22■■■□□ 2.59
TRAF4-205ENST00000444415 TNS3Q68CZ2 1445 aa31.19■■■□□ 2.58
TRAF4-205ENST00000444415 POTEAQ6S8J7 498 aa31.19■■■□□ 2.58
TRAF4-205ENST00000444415 ALS2Q96Q42 1657 aa31.18■■■□□ 2.58
TRAF4-205ENST00000444415 SBNO1A3KN83 1393 aa31.17■■■□□ 2.58
TRAF4-205ENST00000444415 CARD11Q9BXL7 1154 aa31.17■■■□□ 2.58
TRAF4-205ENST00000444415 ABCA3Q99758 1704 aa31.15■■■□□ 2.58
TRAF4-205ENST00000444415 MEX3CQ5U5Q3 659 aaKnown RBP31.15■■■□□ 2.58
TRAF4-205ENST00000444415 MARF1Q9Y4F3 1742 aaKnown RBP31.15■■■□□ 2.58
TRAF4-205ENST00000444415 CABP2Q9NPB3 220 aa31.14■■■□□ 2.57
TRAF4-205ENST00000444415 PSME1Q06323 249 aa31.13■■■□□ 2.57
TRAF4-205ENST00000444415 POLR3AO14802 1390 aaPredicted RBP31.12■■■□□ 2.57
TRAF4-205ENST00000444415 CCDC61Q9Y6R9 512 aa31.12■■■□□ 2.57
TRAF4-205ENST00000444415 SBNO2Q9Y2G9 1366 aa31.11■■■□□ 2.57
TRAF4-205ENST00000444415 ADAMTS2O95450 1211 aa31.1■■■□□ 2.57
TRAF4-205ENST00000444415 SRPK2P78362 688 aaKnown RBP31.09■■■□□ 2.57
TRAF4-205ENST00000444415 CRYBG1Q9Y4K1 1723 aa31.09■■■□□ 2.57
TRAF4-205ENST00000444415 PLEKHG3A1L390 1219 aa31.08■■■□□ 2.57
TRAF4-205ENST00000444415 PPIP5K1Q6PFW1 1433 aa31.08■■■□□ 2.57
TRAF4-205ENST00000444415 AFF2P51816 1311 aa31.08■■■□□ 2.57
TRAF4-205ENST00000444415 NGDNQ8NEJ9 315 aaKnown RBP31.08■■■□□ 2.57
TRAF4-205ENST00000444415 C8orf37Q96NL8 207 aa31.08■■■□□ 2.57
TRAF4-205ENST00000444415 ACEP12821 1306 aa31.07■■■□□ 2.56
TRAF4-205ENST00000444415 TIMELESSQ9UNS1 1208 aa31.06■■■□□ 2.56
TRAF4-205ENST00000444415 EVC2Q86UK5 1308 aa31.05■■■□□ 2.56
TRAF4-205ENST00000444415 CCER1Q8TC90 406 aaPredicted RBP31.05■■■□□ 2.56
TRAF4-205ENST00000444415 ARHGEF10O15013 1369 aa31.04■■■□□ 2.56
TRAF4-205ENST00000444415 CABLES1Q8TDN4 633 aa31.03■■■□□ 2.56
TRAF4-205ENST00000444415 ZNF772Q68DY9 489 aaPredicted RBP31.01■■■□□ 2.55
TRAF4-205ENST00000444415 LMOD2Q6P5Q4 547 aa30.99■■■□□ 2.55
TRAF4-205ENST00000444415 SOCS7O14512 581 aa30.98■■■□□ 2.55
TRAF4-205ENST00000444415 TESK2Q96S53 571 aa30.98■■■□□ 2.55
TRAF4-205ENST00000444415 CABP1Q9NZU7 370 aa30.98■■■□□ 2.55
TRAF4-205ENST00000444415 FNBP4Q8N3X1 1017 aaPredicted RBP30.97■■■□□ 2.55
TRAF4-205ENST00000444415 NGLY1Q96IV0 654 aa30.97■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms