RNA–Protein interactions for RNA: ENST00000443503.6

CTDSPL-206, Transcript of CTD small phosphatase like, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-206ENST00000443503 FOXD4L3Q6VB84 417 aaPredicted RBP27.62■■■□□ 2.01
CTDSPL-206ENST00000443503 TTC5Q8N0Z6 440 aa27.61■■■□□ 2.01
CTDSPL-206ENST00000443503 C22orf23Q9BZE7 217 aa27.6■■■□□ 2.01
CTDSPL-206ENST00000443503 DIAPH3Q9NSV4 1193 aa27.6■■■□□ 2.01
CTDSPL-206ENST00000443503 ISY1Q9ULR0 285 aaKnown RBP27.6■■■□□ 2.01
CTDSPL-206ENST00000443503 KIAA2012Q0VF49 1180 aa27.58■■■□□ 2.01
CTDSPL-206ENST00000443503 ANO2Q9NQ90 1003 aa27.56■■■□□ 2
CTDSPL-206ENST00000443503 RPRD2Q5VT52 1461 aaKnown RBP27.56■■■□□ 2
CTDSPL-206ENST00000443503 PDZRN3Q9UPQ7 1066 aa27.56■■■□□ 2
CTDSPL-206ENST00000443503 CHMP5Q9NZZ3 219 aa27.55■■■□□ 2
CTDSPL-206ENST00000443503 RPGRIP1LQ68CZ1 1315 aa27.55■■■□□ 2
CTDSPL-206ENST00000443503 PTPRKQ15262 1439 aa27.55■■■□□ 2
CTDSPL-206ENST00000443503 TWISTNBQ3B726 338 aaPredicted RBP27.53■■■□□ 2
CTDSPL-206ENST00000443503 EVA1CP58658 441 aa27.53■■■□□ 2
CTDSPL-206ENST00000443503 ABTB2Q8N961 1025 aa27.52■■■□□ 2
CTDSPL-206ENST00000443503 SULT6B1Q6IMI4 303 aa27.52■■■□□ 2
CTDSPL-206ENST00000443503 IFIT2P09913 472 aaKnown RBP27.52■■■□□ 2
CTDSPL-206ENST00000443503 DDX58O95786 925 aaKnown RBP27.51■■□□□ 1.99
CTDSPL-206ENST00000443503 GTF2E1P29083 439 aaPredicted RBP27.51■■□□□ 1.99
CTDSPL-206ENST00000443503 RAPGEF4Q8WZA2 1011 aa27.51■■□□□ 1.99
CTDSPL-206ENST00000443503 CSPP1Q1MSJ5 1256 aa27.51■■□□□ 1.99
CTDSPL-206ENST00000443503 TOMM22Q9NS69 142 aa27.51■■□□□ 1.99
CTDSPL-206ENST00000443503 WDR63Q8IWG1 891 aa27.51■■□□□ 1.99
CTDSPL-206ENST00000443503 NOB1Q9ULX3 412 aaKnown RBP27.5■■□□□ 1.99
CTDSPL-206ENST00000443503 INTS3Q68E01 1043 aaKnown RBP27.5■■□□□ 1.99
CTDSPL-206ENST00000443503 SLC26A8Q96RN1 970 aa27.5■■□□□ 1.99
CTDSPL-206ENST00000443503 C1orf115Q9H7X2 142 aa27.5■■□□□ 1.99
CTDSPL-206ENST00000443503 RUFY2Q8WXA3 655 aa27.49■■□□□ 1.99
CTDSPL-206ENST00000443503 NLRP2Q9NX02 1062 aa27.49■■□□□ 1.99
CTDSPL-206ENST00000443503 THOC2Q8NI27 1593 aaKnown RBP27.48■■□□□ 1.99
CTDSPL-206ENST00000443503 NSD3Q9BZ95 1437 aa27.48■■□□□ 1.99
CTDSPL-206ENST00000443503 NFKBIBQ15653 356 aa27.48■■□□□ 1.99
CTDSPL-206ENST00000443503 BACH2Q9BYV9 841 aa27.47■■□□□ 1.99
CTDSPL-206ENST00000443503 KIF14Q15058 1648 aa27.46■■□□□ 1.99
CTDSPL-206ENST00000443503 WWC1Q8IX03 1113 aa27.46■■□□□ 1.99
CTDSPL-206ENST00000443503 ZKSCAN1P17029 563 aaPredicted RBP27.46■■□□□ 1.99
CTDSPL-206ENST00000443503 SLFN5Q08AF3 891 aa27.46■■□□□ 1.99
CTDSPL-206ENST00000443503 G3BP1Q13283 466 aaKnown RBP eCLIP27.46■■□□□ 1.99
CTDSPL-206ENST00000443503 KIF3AQ9Y496 699 aa27.46■■□□□ 1.99
CTDSPL-206ENST00000443503 AIMP1Q12904 312 aaKnown RBP27.45■■□□□ 1.99
CTDSPL-206ENST00000443503 GAS2L2Q8NHY3 880 aa27.45■■□□□ 1.99
CTDSPL-206ENST00000443503 ADGRF5Q8IZF2 1346 aa27.45■■□□□ 1.99
CTDSPL-206ENST00000443503 UBTFL1P0CB47 393 aaPredicted RBP27.45■■□□□ 1.99
CTDSPL-206ENST00000443503 SKOR2Q2VWA4 1001 aaPredicted RBP27.45■■□□□ 1.99
CTDSPL-206ENST00000443503 FRAT2O75474 233 aaPredicted RBP27.45■■□□□ 1.98
CTDSPL-206ENST00000443503 ZNF692Q9BU19 519 aaPredicted RBP27.45■■□□□ 1.98
CTDSPL-206ENST00000443503 RTEL1-TNFRSF6BF6WH68 1400 aa27.45■■□□□ 1.98
CTDSPL-206ENST00000443503 ATAD2Q6PL18 1390 aa27.44■■□□□ 1.98
CTDSPL-206ENST00000443503 ATF7IPQ6VMQ6 1270 aa27.44■■□□□ 1.98
CTDSPL-206ENST00000443503 CDC45O75419 566 aa27.43■■□□□ 1.98
CTDSPL-206ENST00000443503 PHF14O94880 888 aa27.42■■□□□ 1.98
CTDSPL-206ENST00000443503 GPATCH8Q9UKJ3 1502 aaKnown RBP27.42■■□□□ 1.98
CTDSPL-206ENST00000443503 ATF3P18847 181 aa27.42■■□□□ 1.98
CTDSPL-206ENST00000443503 RRS1Q15050 365 aaKnown RBP27.42■■□□□ 1.98
CTDSPL-206ENST00000443503 MAPKBP1O60336 1514 aa27.42■■□□□ 1.98
CTDSPL-206ENST00000443503 ATP6V1DQ9Y5K8 247 aa27.42■■□□□ 1.98
CTDSPL-206ENST00000443503 ESCO1Q5FWF5 840 aa27.41■■□□□ 1.98
CTDSPL-206ENST00000443503 ZBTB4Q9P1Z0 1013 aaPredicted RBP27.41■■□□□ 1.98
CTDSPL-206ENST00000443503 SF3A1Q15459 793 aaKnown RBP27.4■■□□□ 1.98
CTDSPL-206ENST00000443503 H3BQV1 296 aa27.4■■□□□ 1.98
CTDSPL-206ENST00000443503 IFFO2Q5TF58 517 aa27.4■■□□□ 1.98
CTDSPL-206ENST00000443503 FAM184AQ8NB25 1140 aa27.4■■□□□ 1.98
CTDSPL-206ENST00000443503 HSP90AB4PQ58FF6 505 aa27.4■■□□□ 1.98
CTDSPL-206ENST00000443503 CD109Q6YHK3 1445 aa27.4■■□□□ 1.98
CTDSPL-206ENST00000443503 GNAI3P08754 354 aa27.39■■□□□ 1.97
CTDSPL-206ENST00000443503 CCDC30Q5VVM6 783 aa27.39■■□□□ 1.97
CTDSPL-206ENST00000443503 THEMISQ8N1K5 641 aaPredicted RBP27.39■■□□□ 1.97
CTDSPL-206ENST00000443503 MVPQ14764 893 aaKnown RBP27.38■■□□□ 1.97
CTDSPL-206ENST00000443503 RIC3Q7Z5B4 369 aa27.38■■□□□ 1.97
CTDSPL-206ENST00000443503 SLC4A2P04920 1241 aa27.38■■□□□ 1.97
CTDSPL-206ENST00000443503 CT47B1P0C2W7 299 aaPredicted RBP27.38■■□□□ 1.97
CTDSPL-206ENST00000443503 ADGRL1O94910 1474 aa27.38■■□□□ 1.97
CTDSPL-206ENST00000443503 SYTL4Q96C24 671 aaPredicted RBP27.37■■□□□ 1.97
CTDSPL-206ENST00000443503 TMPOP42166 694 aaKnown RBP27.37■■□□□ 1.97
CTDSPL-206ENST00000443503 WAPLQ7Z5K2 1190 aa27.37■■□□□ 1.97
CTDSPL-206ENST00000443503 CCDC61Q9Y6R9 512 aa27.37■■□□□ 1.97
CTDSPL-206ENST00000443503 GPRASP1Q5JY77 1395 aa27.37■■□□□ 1.97
CTDSPL-206ENST00000443503 SURF6O75683 361 aaKnown RBP27.36■■□□□ 1.97
CTDSPL-206ENST00000443503 C20orf194Q5TEA3 1177 aa27.35■■□□□ 1.97
CTDSPL-206ENST00000443503 FCHSD2O94868 740 aa27.35■■□□□ 1.97
CTDSPL-206ENST00000443503 IDI1Q13907 227 aa27.34■■□□□ 1.97
CTDSPL-206ENST00000443503 ERC2O15083 957 aa27.33■■□□□ 1.97
CTDSPL-206ENST00000443503 GCC1Q96CN9 775 aa27.33■■□□□ 1.97
CTDSPL-206ENST00000443503 NUDT16Q96DE0 195 aaKnown RBP27.32■■□□□ 1.96
CTDSPL-206ENST00000443503 NUCB2P80303 420 aa27.32■■□□□ 1.96
CTDSPL-206ENST00000443503 THUMPD2Q9BTF0 503 aaKnown RBP27.32■■□□□ 1.96
CTDSPL-206ENST00000443503 HDGFL1Q5TGJ6 251 aa27.31■■□□□ 1.96
CTDSPL-206ENST00000443503 CCDC34Q96HJ3 373 aa27.31■■□□□ 1.96
CTDSPL-206ENST00000443503 ARID3AQ99856 593 aa27.31■■□□□ 1.96
CTDSPL-206ENST00000443503 MCTP1Q6DN14 999 aa27.31■■□□□ 1.96
CTDSPL-206ENST00000443503 UGGT2Q9NYU1 1516 aa27.31■■□□□ 1.96
CTDSPL-206ENST00000443503 NINLQ9Y2I6 1382 aa27.3■■□□□ 1.96
CTDSPL-206ENST00000443503 PROSER2Q86WR7 435 aaPredicted RBP27.3■■□□□ 1.96
CTDSPL-206ENST00000443503 SKAP1Q86WV1 359 aa27.3■■□□□ 1.96
CTDSPL-206ENST00000443503 TPM4P67936 248 aa27.3■■□□□ 1.96
CTDSPL-206ENST00000443503 RNF20Q5VTR2 975 aa27.3■■□□□ 1.96
CTDSPL-206ENST00000443503 LRRFIP1Q32MZ4 808 aaKnown RBP27.29■■□□□ 1.96
CTDSPL-206ENST00000443503 CLASRPQ8N2M8 674 aaKnown RBP27.29■■□□□ 1.96
CTDSPL-206ENST00000443503 PLEKHO1Q53GL0 409 aaPredicted RBP27.29■■□□□ 1.96
CTDSPL-206ENST00000443503 FBXO31Q5XUX0 539 aaPredicted RBP27.29■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms