RNA–Protein interactions for RNA: ENST00000442842.5

TM9SF4-204, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 4

Gene TM9SF4, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-204ENST00000442842 ST20-MTHFSA0A0A6YYL1 179 aa19.1■□□□□ 0.65
TM9SF4-204ENST00000442842 HSPA5P11021 654 aaKnown RBP19.1■□□□□ 0.65
TM9SF4-204ENST00000442842 SIRT1Q96EB6 747 aa19.1■□□□□ 0.65
TM9SF4-204ENST00000442842 HIRIP3Q9BW71 556 aaPredicted RBP19.1■□□□□ 0.65
TM9SF4-204ENST00000442842 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.09■□□□□ 0.65
TM9SF4-204ENST00000442842 MSH6P52701 1360 aa19.07■□□□□ 0.64
TM9SF4-204ENST00000442842 XIRP1Q702N8 1843 aaKnown RBP19.07■□□□□ 0.64
TM9SF4-204ENST00000442842 NCOA3Q9Y6Q9 1424 aa19.06■□□□□ 0.64
TM9SF4-204ENST00000442842 ADGRB2O60241 1585 aa19.06■□□□□ 0.64
TM9SF4-204ENST00000442842 CDC42BPGQ6DT37 1551 aa19.05■□□□□ 0.64
TM9SF4-204ENST00000442842 TULP4Q9NRJ4 1543 aa19.04■□□□□ 0.64
TM9SF4-204ENST00000442842 SBNO2Q9Y2G9 1366 aa19.02■□□□□ 0.64
TM9SF4-204ENST00000442842 ATF3P18847 181 aa19.01■□□□□ 0.63
TM9SF4-204ENST00000442842 CERKQ8TCT0 537 aa19.01■□□□□ 0.63
TM9SF4-204ENST00000442842 TESK2Q96S53 571 aa19.01■□□□□ 0.63
TM9SF4-204ENST00000442842 C19orf44Q9H6X5 657 aa19.01■□□□□ 0.63
TM9SF4-204ENST00000442842 DCCP43146 1447 aa19■□□□□ 0.63
TM9SF4-204ENST00000442842 NUTM2FA1L443 756 aa19■□□□□ 0.63
TM9SF4-204ENST00000442842 DISP3Q9P2K9 1392 aa18.99■□□□□ 0.63
TM9SF4-204ENST00000442842 SRPK2P78362 688 aaKnown RBP18.99■□□□□ 0.63
TM9SF4-204ENST00000442842 EVC2Q86UK5 1308 aa18.99■□□□□ 0.63
TM9SF4-204ENST00000442842 IQSEC2Q5JU85 1478 aa18.98■□□□□ 0.63
TM9SF4-204ENST00000442842 FMN2Q9NZ56 1722 aa18.98■□□□□ 0.63
TM9SF4-204ENST00000442842 WASLO00401 505 aaPredicted RBP18.98■□□□□ 0.63
TM9SF4-204ENST00000442842 TMF1P82094 1093 aa18.98■□□□□ 0.63
TM9SF4-204ENST00000442842 CDK19Q9BWU1 502 aa18.98■□□□□ 0.63
TM9SF4-204ENST00000442842 CADPS2Q86UW7 1296 aa18.97■□□□□ 0.63
TM9SF4-204ENST00000442842 POLR3GLQ9BT43 218 aa18.97■□□□□ 0.63
TM9SF4-204ENST00000442842 CABP2Q9NPB3 220 aa18.97■□□□□ 0.63
TM9SF4-204ENST00000442842 MST1RQ04912 1400 aa18.96■□□□□ 0.63
TM9SF4-204ENST00000442842 ATP7BP35670 1465 aa18.94■□□□□ 0.62
TM9SF4-204ENST00000442842 SLC24A1O60721 1099 aa18.93■□□□□ 0.62
TM9SF4-204ENST00000442842 USP32Q8NFA0 1604 aa18.92■□□□□ 0.62
TM9SF4-204ENST00000442842 ANKARQ7Z5J8 1434 aa18.92■□□□□ 0.62
TM9SF4-204ENST00000442842 C1orf167Q5SNV9 1468 aa18.92■□□□□ 0.62
TM9SF4-204ENST00000442842 UBAP1LF5GYI3 381 aa18.92■□□□□ 0.62
TM9SF4-204ENST00000442842 PRR36Q9H6K5 1346 aa18.92■□□□□ 0.62
TM9SF4-204ENST00000442842 SCAF1Q9H7N4 1312 aaKnown RBP18.91■□□□□ 0.62
TM9SF4-204ENST00000442842 NUDT16Q96DE0 195 aaKnown RBP18.9■□□□□ 0.62
TM9SF4-204ENST00000442842 ATAD2Q6PL18 1390 aa18.9■□□□□ 0.62
TM9SF4-204ENST00000442842 TOM1O60784 492 aa18.89■□□□□ 0.61
TM9SF4-204ENST00000442842 PIP4K2BP78356 416 aa18.89■□□□□ 0.61
TM9SF4-204ENST00000442842 CDCA8Q53HL2 280 aa18.89■□□□□ 0.61
TM9SF4-204ENST00000442842 PPIP5K1Q6PFW1 1433 aa18.89■□□□□ 0.61
TM9SF4-204ENST00000442842 TOPAZ1Q8N9V7 1692 aa18.89■□□□□ 0.61
TM9SF4-204ENST00000442842 C11orf95C9JLR9 678 aaPredicted RBP18.88■□□□□ 0.61
TM9SF4-204ENST00000442842 ESCO1Q5FWF5 840 aa18.88■□□□□ 0.61
TM9SF4-204ENST00000442842 SLAIN2Q9P270 581 aa18.88■□□□□ 0.61
TM9SF4-204ENST00000442842 ITSN1Q15811 1721 aa18.87■□□□□ 0.61
TM9SF4-204ENST00000442842 KIF7Q2M1P5 1343 aa18.87■□□□□ 0.61
TM9SF4-204ENST00000442842 TMC1Q8TDI8 760 aa18.86■□□□□ 0.61
TM9SF4-204ENST00000442842 ORAI2Q96SN7 254 aa18.86■□□□□ 0.61
TM9SF4-204ENST00000442842 PMFBP1Q8TBY8 1022 aa18.85■□□□□ 0.61
TM9SF4-204ENST00000442842 ROBO1Q9Y6N7 1651 aa18.85■□□□□ 0.61
TM9SF4-204ENST00000442842 CCDC7Q96M83 1385 aa18.84■□□□□ 0.61
TM9SF4-204ENST00000442842 BRINP3Q76B58 766 aa18.84■□□□□ 0.61
TM9SF4-204ENST00000442842 CCDC61Q9Y6R9 512 aa18.84■□□□□ 0.61
TM9SF4-204ENST00000442842 KIF1AQ12756 1690 aa18.84■□□□□ 0.61
TM9SF4-204ENST00000442842 RGPD8O14715 1765 aaPredicted RBP18.83■□□□□ 0.61
TM9SF4-204ENST00000442842 WASHC2AQ641Q2 1341 aa18.83■□□□□ 0.61
TM9SF4-204ENST00000442842 PHF8Q9UPP1 1060 aa18.83■□□□□ 0.6
TM9SF4-204ENST00000442842 MYOM1P52179 1685 aa18.82■□□□□ 0.6
TM9SF4-204ENST00000442842 CABP1Q9NZU7 370 aa18.82■□□□□ 0.6
TM9SF4-204ENST00000442842 NGDNQ8NEJ9 315 aaKnown RBP18.81■□□□□ 0.6
TM9SF4-204ENST00000442842 PUS7Q96PZ0 661 aaKnown RBP18.81■□□□□ 0.6
TM9SF4-204ENST00000442842 NINLQ9Y2I6 1382 aa18.8■□□□□ 0.6
TM9SF4-204ENST00000442842 ZNF316A6NFI3 1004 aaPredicted RBP18.79■□□□□ 0.6
TM9SF4-204ENST00000442842 DDX17Q92841 729 aaKnown RBP18.79■□□□□ 0.6
TM9SF4-204ENST00000442842 SLC12A5Q9H2X9 1139 aa18.79■□□□□ 0.6
TM9SF4-204ENST00000442842 ACEP12821 1306 aa18.78■□□□□ 0.6
TM9SF4-204ENST00000442842 PLEKHG3A1L390 1219 aa18.77■□□□□ 0.6
TM9SF4-204ENST00000442842 FOXO3O43524 673 aa18.77■□□□□ 0.6
TM9SF4-204ENST00000442842 XPCQ01831 940 aaPredicted RBP18.77■□□□□ 0.6
TM9SF4-204ENST00000442842 A0A1W2PP64 1363 aa18.77■□□□□ 0.6
TM9SF4-204ENST00000442842 NHSL1Q5SYE7 1610 aa18.76■□□□□ 0.59
TM9SF4-204ENST00000442842 HDGFL2Q7Z4V5 671 aaPredicted RBP18.76■□□□□ 0.59
TM9SF4-204ENST00000442842 CD163L1Q9NR16 1453 aa18.76■□□□□ 0.59
TM9SF4-204ENST00000442842 NPHP3Q7Z494 1330 aa18.75■□□□□ 0.59
TM9SF4-204ENST00000442842 POLR3AO14802 1390 aaPredicted RBP18.75■□□□□ 0.59
TM9SF4-204ENST00000442842 ANKRD36BQ8N2N9 1353 aa18.75■□□□□ 0.59
TM9SF4-204ENST00000442842 AHDC1Q5TGY3 1603 aaPredicted RBP18.74■□□□□ 0.59
TM9SF4-204ENST00000442842 KTN1Q86UP2 1357 aaKnown RBP18.74■□□□□ 0.59
TM9SF4-204ENST00000442842 PSME1Q06323 249 aa18.74■□□□□ 0.59
TM9SF4-204ENST00000442842 TERF2IPQ9NYB0 399 aa18.74■□□□□ 0.59
TM9SF4-204ENST00000442842 USP6P35125 1406 aa18.73■□□□□ 0.59
TM9SF4-204ENST00000442842 PXDNQ92626 1479 aa18.72■□□□□ 0.59
TM9SF4-204ENST00000442842 AKAP12Q02952 1782 aa18.72■□□□□ 0.59
TM9SF4-204ENST00000442842 CPSF1Q10570 1443 aaKnown RBP18.72■□□□□ 0.59
TM9SF4-204ENST00000442842 PHLPP1O60346 1717 aa18.71■□□□□ 0.59
TM9SF4-204ENST00000442842 KRT28Q7Z3Y7 464 aa18.71■□□□□ 0.59
TM9SF4-204ENST00000442842 NSD3Q9BZ95 1437 aa18.71■□□□□ 0.59
TM9SF4-204ENST00000442842 NRKQ7Z2Y5 1582 aa18.71■□□□□ 0.59
TM9SF4-204ENST00000442842 MON2Q7Z3U7 1717 aa18.71■□□□□ 0.59
TM9SF4-204ENST00000442842 PAK3O75914 559 aaPredicted RBP18.7■□□□□ 0.58
TM9SF4-204ENST00000442842 PANK3Q9H999 370 aa18.7■□□□□ 0.58
TM9SF4-204ENST00000442842 EDC4Q6P2E9 1401 aaKnown RBP18.68■□□□□ 0.58
TM9SF4-204ENST00000442842 LMOD2Q6P5Q4 547 aa18.68■□□□□ 0.58
TM9SF4-204ENST00000442842 FBXO41Q8TF61 875 aa18.68■□□□□ 0.58
TM9SF4-204ENST00000442842 ZNF692Q9BU19 519 aaPredicted RBP18.68■□□□□ 0.58
TM9SF4-204ENST00000442842 COL16A1Q07092 1604 aaPredicted RBP18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms