RNA–Protein interactions for RNA: ENST00000442730.1

HDLBP-220, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-220ENST00000442730 PHF23Q9BUL5 403 aaPredicted RBP32.29■■■□□ 2.76
HDLBP-220ENST00000442730 STAC3Q96MF2 364 aa32.28■■■□□ 2.76
HDLBP-220ENST00000442730 SHPRHQ149N8 1683 aa32.27■■■□□ 2.76
HDLBP-220ENST00000442730 DLC1Q96QB1 1528 aa32.26■■■□□ 2.76
HDLBP-220ENST00000442730 SIRT1Q96EB6 747 aa32.26■■■□□ 2.75
HDLBP-220ENST00000442730 ORAI2Q96SN7 254 aa32.22■■■□□ 2.75
HDLBP-220ENST00000442730 DDX17Q92841 729 aaKnown RBP32.21■■■□□ 2.75
HDLBP-220ENST00000442730 LRP6O75581 1613 aa32.2■■■□□ 2.75
HDLBP-220ENST00000442730 FMN2Q9NZ56 1722 aa32.2■■■□□ 2.74
HDLBP-220ENST00000442730 SPATA31A6Q5VVP1 1343 aa32.19■■■□□ 2.74
HDLBP-220ENST00000442730 PRAM1Q96QH2 718 aa32.18■■■□□ 2.74
HDLBP-220ENST00000442730 RGS17Q9UGC6 210 aaPredicted RBP32.16■■■□□ 2.74
HDLBP-220ENST00000442730 ADGRB2O60241 1585 aa32.13■■■□□ 2.73
HDLBP-220ENST00000442730 LRRC59Q96AG4 307 aaKnown RBP32.12■■■□□ 2.73
HDLBP-220ENST00000442730 KIAA1210Q9ULL0 1709 aa32.12■■■□□ 2.73
HDLBP-220ENST00000442730 SOS2Q07890 1332 aaPredicted RBP32.11■■■□□ 2.73
HDLBP-220ENST00000442730 TRIM26Q12899 539 aaPredicted RBP32.11■■■□□ 2.73
HDLBP-220ENST00000442730 SAFB2Q14151 953 aaKnown RBP eCLIP32.11■■■□□ 2.73
HDLBP-220ENST00000442730 ESCO1Q5FWF5 840 aa32.11■■■□□ 2.73
HDLBP-220ENST00000442730 TRAK1Q9UPV9 953 aa32.11■■■□□ 2.73
HDLBP-220ENST00000442730 PNPLA6Q8IY17 1366 aa32.1■■■□□ 2.73
HDLBP-220ENST00000442730 NUTM2FA1L443 756 aa32.09■■■□□ 2.73
HDLBP-220ENST00000442730 POGKQ9P215 609 aa32.09■■■□□ 2.73
HDLBP-220ENST00000442730 SOCS7O14512 581 aa32.08■■■□□ 2.73
HDLBP-220ENST00000442730 PXDNQ92626 1479 aa32.08■■■□□ 2.73
HDLBP-220ENST00000442730 ARHGEF28Q8N1W1 1705 aaKnown RBP32.07■■■□□ 2.72
HDLBP-220ENST00000442730 KIF1AQ12756 1690 aa32.06■■■□□ 2.72
HDLBP-220ENST00000442730 NPHP3Q7Z494 1330 aa32.05■■■□□ 2.72
HDLBP-220ENST00000442730 SIN3AQ96ST3 1273 aa32.05■■■□□ 2.72
HDLBP-220ENST00000442730 USP32Q8NFA0 1604 aa32.01■■■□□ 2.72
HDLBP-220ENST00000442730 L3MBTL2Q969R5 705 aa32.01■■■□□ 2.71
HDLBP-220ENST00000442730 NUTM2BA6NNL0 878 aaPredicted RBP32■■■□□ 2.71
HDLBP-220ENST00000442730 NUTM2EB1AL46 878 aaPredicted RBP32■■■□□ 2.71
HDLBP-220ENST00000442730 FOXO3O43524 673 aa32■■■□□ 2.71
HDLBP-220ENST00000442730 MEX3CQ5U5Q3 659 aaKnown RBP32■■■□□ 2.71
HDLBP-220ENST00000442730 NUTM2AQ8IVF1 878 aaPredicted RBP32■■■□□ 2.71
HDLBP-220ENST00000442730 ANKARQ7Z5J8 1434 aa32■■■□□ 2.71
HDLBP-220ENST00000442730 COL22A1Q8NFW1 1626 aaPredicted RBP31.98■■■□□ 2.71
HDLBP-220ENST00000442730 POTEAQ6S8J7 498 aa31.98■■■□□ 2.71
HDLBP-220ENST00000442730 RGPD8O14715 1765 aaPredicted RBP31.98■■■□□ 2.71
HDLBP-220ENST00000442730 MINK1Q8N4C8 1332 aaPredicted RBP31.98■■■□□ 2.71
HDLBP-220ENST00000442730 HIRIP3Q9BW71 556 aaPredicted RBP31.97■■■□□ 2.71
HDLBP-220ENST00000442730 XPCQ01831 940 aaPredicted RBP31.96■■■□□ 2.71
HDLBP-220ENST00000442730 NEUROD1Q13562 356 aa31.96■■■□□ 2.71
HDLBP-220ENST00000442730 NBPF1Q3BBV0 1214 aa31.95■■■□□ 2.71
HDLBP-220ENST00000442730 TULP4Q9NRJ4 1543 aa31.95■■■□□ 2.7
HDLBP-220ENST00000442730 EIF3AQ14152 1382 aaKnown RBP31.93■■■□□ 2.7
HDLBP-220ENST00000442730 PHF8Q9UPP1 1060 aa31.92■■■□□ 2.7
HDLBP-220ENST00000442730 TRPM1Q7Z4N2 1603 aa31.89■■■□□ 2.7
HDLBP-220ENST00000442730 WASLO00401 505 aaPredicted RBP31.89■■■□□ 2.7
HDLBP-220ENST00000442730 PRR36Q9H6K5 1346 aa31.89■■■□□ 2.7
HDLBP-220ENST00000442730 ZNF772Q68DY9 489 aaPredicted RBP31.86■■■□□ 2.69
HDLBP-220ENST00000442730 ATP7BP35670 1465 aa31.84■■■□□ 2.69
HDLBP-220ENST00000442730 SPATA31A3Q5VYP0 1347 aa31.84■■■□□ 2.69
HDLBP-220ENST00000442730 KRT28Q7Z3Y7 464 aa31.84■■■□□ 2.69
HDLBP-220ENST00000442730 AFF2P51816 1311 aa31.83■■■□□ 2.69
HDLBP-220ENST00000442730 C8orf37Q96NL8 207 aa31.83■■■□□ 2.69
HDLBP-220ENST00000442730 TNS3Q68CZ2 1445 aa31.83■■■□□ 2.69
HDLBP-220ENST00000442730 ADAMTS2O95450 1211 aa31.82■■■□□ 2.68
HDLBP-220ENST00000442730 PMFBP1Q8TBY8 1022 aa31.81■■■□□ 2.68
HDLBP-220ENST00000442730 ITSN1Q15811 1721 aa31.79■■■□□ 2.68
HDLBP-220ENST00000442730 SBNO1A3KN83 1393 aa31.79■■■□□ 2.68
HDLBP-220ENST00000442730 CENPJQ9HC77 1338 aaPredicted RBP31.77■■■□□ 2.68
HDLBP-220ENST00000442730 QRICH2Q9H0J4 1663 aa31.77■■■□□ 2.68
HDLBP-220ENST00000442730 PSME1Q06323 249 aa31.77■■■□□ 2.68
HDLBP-220ENST00000442730 ROCK2O75116 1388 aaKnown RBP31.77■■■□□ 2.68
HDLBP-220ENST00000442730 TRPM3Q9HCF6 1732 aaPredicted RBP31.77■■■□□ 2.68
HDLBP-220ENST00000442730 TOPAZ1Q8N9V7 1692 aa31.76■■■□□ 2.68
HDLBP-220ENST00000442730 CDK19Q9BWU1 502 aa31.75■■■□□ 2.67
HDLBP-220ENST00000442730 TONSLQ96HA7 1378 aa31.75■■■□□ 2.67
HDLBP-220ENST00000442730 NUDT16Q96DE0 195 aaKnown RBP31.74■■■□□ 2.67
HDLBP-220ENST00000442730 MARF1Q9Y4F3 1742 aaKnown RBP31.73■■■□□ 2.67
HDLBP-220ENST00000442730 NBPF8Q3BBV2 869 aa31.73■■■□□ 2.67
HDLBP-220ENST00000442730 NGLY1Q96IV0 654 aa31.73■■■□□ 2.67
HDLBP-220ENST00000442730 ARHGEF10O15013 1369 aa31.71■■■□□ 2.67
HDLBP-220ENST00000442730 GPRASP1Q5JY77 1395 aa31.71■■■□□ 2.67
HDLBP-220ENST00000442730 ABCA3Q99758 1704 aa31.69■■■□□ 2.66
HDLBP-220ENST00000442730 ALS2Q96Q42 1657 aa31.69■■■□□ 2.66
HDLBP-220ENST00000442730 FNBP4Q8N3X1 1017 aaPredicted RBP31.67■■■□□ 2.66
HDLBP-220ENST00000442730 NGDNQ8NEJ9 315 aaKnown RBP31.67■■■□□ 2.66
HDLBP-220ENST00000442730 RALGAPBQ86X10 1494 aa31.66■■■□□ 2.66
HDLBP-220ENST00000442730 CDK12Q9NYV4 1490 aaPredicted RBP31.65■■■□□ 2.66
HDLBP-220ENST00000442730 RXRBP28702 533 aa31.65■■■□□ 2.66
HDLBP-220ENST00000442730 POLR3AO14802 1390 aaPredicted RBP31.64■■■□□ 2.66
HDLBP-220ENST00000442730 LMOD2Q6P5Q4 547 aa31.63■■■□□ 2.65
HDLBP-220ENST00000442730 USP21Q9UK80 565 aa31.63■■■□□ 2.65
HDLBP-220ENST00000442730 CCDC61Q9Y6R9 512 aa31.63■■■□□ 2.65
HDLBP-220ENST00000442730 CABLES1Q8TDN4 633 aa31.62■■■□□ 2.65
HDLBP-220ENST00000442730 QTRT2Q9H974 415 aaKnown RBP31.62■■■□□ 2.65
HDLBP-220ENST00000442730 SRPK2P78362 688 aaKnown RBP31.61■■■□□ 2.65
HDLBP-220ENST00000442730 BCL9LQ86UU0 1499 aa31.6■■■□□ 2.65
HDLBP-220ENST00000442730 ATRNO75882 1429 aa31.59■■■□□ 2.65
HDLBP-220ENST00000442730 PLEKHG3A1L390 1219 aa31.59■■■□□ 2.65
HDLBP-220ENST00000442730 CABP2Q9NPB3 220 aa31.59■■■□□ 2.65
HDLBP-220ENST00000442730 PPIP5K1Q6PFW1 1433 aa31.58■■■□□ 2.65
HDLBP-220ENST00000442730 SLIT2O94813 1529 aa31.58■■■□□ 2.65
HDLBP-220ENST00000442730 ACEP12821 1306 aa31.57■■■□□ 2.64
HDLBP-220ENST00000442730 PLEKHG5O94827 1062 aa31.57■■■□□ 2.64
HDLBP-220ENST00000442730 HAP1P54257 671 aaPredicted RBP31.57■■■□□ 2.64
HDLBP-220ENST00000442730 RBM6P78332 1123 aaKnown RBP31.57■■■□□ 2.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms