RNA–Protein interactions for RNA: ENST00000440571.5

CNOT3-203, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 5

Gene CNOT3, Length 1,125 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-203ENST00000440571 SIPA1L2Q9P2F8 1722 aaPredicted RBP32.21■■■□□ 2.75
CNOT3-203ENST00000440571 TIMELESSQ9UNS1 1208 aa32.18■■■□□ 2.74
CNOT3-203ENST00000440571 DLC1Q96QB1 1528 aa32.16■■■□□ 2.74
CNOT3-203ENST00000440571 BRINP3Q76B58 766 aa32.14■■■□□ 2.74
CNOT3-203ENST00000440571 ROCK2O75116 1388 aaKnown RBP32.14■■■□□ 2.74
CNOT3-203ENST00000440571 MST1RQ04912 1400 aa32.14■■■□□ 2.74
CNOT3-203ENST00000440571 KNDC1Q76NI1 1749 aa32.14■■■□□ 2.74
CNOT3-203ENST00000440571 KIAA1210Q9ULL0 1709 aa32.12■■■□□ 2.73
CNOT3-203ENST00000440571 MINK1Q8N4C8 1332 aaPredicted RBP32.11■■■□□ 2.73
CNOT3-203ENST00000440571 NUTM2FA1L443 756 aa32.1■■■□□ 2.73
CNOT3-203ENST00000440571 HIRIP3Q9BW71 556 aaPredicted RBP32.1■■■□□ 2.73
CNOT3-203ENST00000440571 NALCNQ8IZF0 1738 aa32.09■■■□□ 2.73
CNOT3-203ENST00000440571 C1orf167Q5SNV9 1468 aa32.08■■■□□ 2.73
CNOT3-203ENST00000440571 ORAI2Q96SN7 254 aa32.07■■■□□ 2.72
CNOT3-203ENST00000440571 ESCO1Q5FWF5 840 aa32.06■■■□□ 2.72
CNOT3-203ENST00000440571 CARD11Q9BXL7 1154 aa32.06■■■□□ 2.72
CNOT3-203ENST00000440571 ROBO1Q9Y6N7 1651 aa32.04■■■□□ 2.72
CNOT3-203ENST00000440571 CENPJQ9HC77 1338 aaPredicted RBP32.02■■■□□ 2.72
CNOT3-203ENST00000440571 WASLO00401 505 aaPredicted RBP32.02■■■□□ 2.72
CNOT3-203ENST00000440571 CDC42BPGQ6DT37 1551 aa32.01■■■□□ 2.71
CNOT3-203ENST00000440571 GPRASP1Q5JY77 1395 aa31.99■■■□□ 2.71
CNOT3-203ENST00000440571 TRPM1Q7Z4N2 1603 aa31.99■■■□□ 2.71
CNOT3-203ENST00000440571 DDX17Q92841 729 aaKnown RBP31.97■■■□□ 2.71
CNOT3-203ENST00000440571 CDK19Q9BWU1 502 aa31.95■■■□□ 2.71
CNOT3-203ENST00000440571 RALGAPBQ86X10 1494 aa31.94■■■□□ 2.7
CNOT3-203ENST00000440571 EIF3AQ14152 1382 aaKnown RBP31.94■■■□□ 2.7
CNOT3-203ENST00000440571 FOXO3O43524 673 aa31.92■■■□□ 2.7
CNOT3-203ENST00000440571 PHF8Q9UPP1 1060 aa31.91■■■□□ 2.7
CNOT3-203ENST00000440571 ARHGEF28Q8N1W1 1705 aaKnown RBP31.9■■■□□ 2.7
CNOT3-203ENST00000440571 LRRC59Q96AG4 307 aaKnown RBP31.89■■■□□ 2.7
CNOT3-203ENST00000440571 NUDT16Q96DE0 195 aaKnown RBP31.88■■■□□ 2.69
CNOT3-203ENST00000440571 NPHP3Q7Z494 1330 aa31.88■■■□□ 2.69
CNOT3-203ENST00000440571 ANKARQ7Z5J8 1434 aa31.87■■■□□ 2.69
CNOT3-203ENST00000440571 SRPK2P78362 688 aaKnown RBP31.86■■■□□ 2.69
CNOT3-203ENST00000440571 AHDC1Q5TGY3 1603 aaPredicted RBP31.86■■■□□ 2.69
CNOT3-203ENST00000440571 ADGRB2O60241 1585 aa31.85■■■□□ 2.69
CNOT3-203ENST00000440571 PRR36Q9H6K5 1346 aa31.85■■■□□ 2.69
CNOT3-203ENST00000440571 PMFBP1Q8TBY8 1022 aa31.85■■■□□ 2.69
CNOT3-203ENST00000440571 JCADQ9P266 1359 aa31.84■■■□□ 2.69
CNOT3-203ENST00000440571 FMN2Q9NZ56 1722 aa31.84■■■□□ 2.69
CNOT3-203ENST00000440571 SOS2Q07890 1332 aaPredicted RBP31.84■■■□□ 2.69
CNOT3-203ENST00000440571 PHLPP1O60346 1717 aa31.83■■■□□ 2.69
CNOT3-203ENST00000440571 EVC2Q86UK5 1308 aa31.83■■■□□ 2.69
CNOT3-203ENST00000440571 XPCQ01831 940 aaPredicted RBP31.82■■■□□ 2.68
CNOT3-203ENST00000440571 CABP2Q9NPB3 220 aa31.82■■■□□ 2.68
CNOT3-203ENST00000440571 PSME1Q06323 249 aa31.81■■■□□ 2.68
CNOT3-203ENST00000440571 KRT28Q7Z3Y7 464 aa31.81■■■□□ 2.68
CNOT3-203ENST00000440571 CCDC61Q9Y6R9 512 aa31.81■■■□□ 2.68
CNOT3-203ENST00000440571 TULP4Q9NRJ4 1543 aa31.79■■■□□ 2.68
CNOT3-203ENST00000440571 ST20-MTHFSA0A0A6YYL1 179 aa31.78■■■□□ 2.68
CNOT3-203ENST00000440571 NGDNQ8NEJ9 315 aaKnown RBP31.78■■■□□ 2.68
CNOT3-203ENST00000440571 COL16A1Q07092 1604 aaPredicted RBP31.76■■■□□ 2.67
CNOT3-203ENST00000440571 SLC24A1O60721 1099 aa31.73■■■□□ 2.67
CNOT3-203ENST00000440571 NHSL1Q5SYE7 1610 aa31.72■■■□□ 2.67
CNOT3-203ENST00000440571 PLEKHG3A1L390 1219 aa31.72■■■□□ 2.67
CNOT3-203ENST00000440571 SPATA31A6Q5VVP1 1343 aa31.72■■■□□ 2.67
CNOT3-203ENST00000440571 SBNO2Q9Y2G9 1366 aa31.7■■■□□ 2.67
CNOT3-203ENST00000440571 QRICH2Q9H0J4 1663 aa31.7■■■□□ 2.66
CNOT3-203ENST00000440571 USP47Q96K76 1375 aa31.69■■■□□ 2.66
CNOT3-203ENST00000440571 USP32Q8NFA0 1604 aa31.69■■■□□ 2.66
CNOT3-203ENST00000440571 NUTM2BA6NNL0 878 aaPredicted RBP31.69■■■□□ 2.66
CNOT3-203ENST00000440571 NUTM2EB1AL46 878 aaPredicted RBP31.69■■■□□ 2.66
CNOT3-203ENST00000440571 NUTM2AQ8IVF1 878 aaPredicted RBP31.69■■■□□ 2.66
CNOT3-203ENST00000440571 ATP7BP35670 1465 aa31.69■■■□□ 2.66
CNOT3-203ENST00000440571 CABP1Q9NZU7 370 aa31.68■■■□□ 2.66
CNOT3-203ENST00000440571 PXDNQ92626 1479 aa31.67■■■□□ 2.66
CNOT3-203ENST00000440571 TESK2Q96S53 571 aa31.67■■■□□ 2.66
CNOT3-203ENST00000440571 PNPLA6Q8IY17 1366 aa31.67■■■□□ 2.66
CNOT3-203ENST00000440571 ACEP12821 1306 aa31.66■■■□□ 2.66
CNOT3-203ENST00000440571 SPATA31A3Q5VYP0 1347 aa31.66■■■□□ 2.66
CNOT3-203ENST00000440571 KIF1AQ12756 1690 aa31.66■■■□□ 2.66
CNOT3-203ENST00000440571 RGPD8O14715 1765 aaPredicted RBP31.65■■■□□ 2.66
CNOT3-203ENST00000440571 DISP3Q9P2K9 1392 aa31.65■■■□□ 2.66
CNOT3-203ENST00000440571 LMOD2Q6P5Q4 547 aa31.64■■■□□ 2.66
CNOT3-203ENST00000440571 SBNO1A3KN83 1393 aa31.63■■■□□ 2.65
CNOT3-203ENST00000440571 PPIP5K1Q6PFW1 1433 aa31.63■■■□□ 2.65
CNOT3-203ENST00000440571 MEX3CQ5U5Q3 659 aaKnown RBP31.62■■■□□ 2.65
CNOT3-203ENST00000440571 PHF23Q9BUL5 403 aaPredicted RBP31.62■■■□□ 2.65
CNOT3-203ENST00000440571 PAK3O75914 559 aaPredicted RBP31.61■■■□□ 2.65
CNOT3-203ENST00000440571 ATAD2Q6PL18 1390 aa31.6■■■□□ 2.65
CNOT3-203ENST00000440571 PUS7Q96PZ0 661 aaKnown RBP31.6■■■□□ 2.65
CNOT3-203ENST00000440571 POLR3AO14802 1390 aaPredicted RBP31.59■■■□□ 2.65
CNOT3-203ENST00000440571 TMF1P82094 1093 aa31.59■■■□□ 2.65
CNOT3-203ENST00000440571 EIF4G2P78344 907 aaKnown RBP eCLIP31.58■■■□□ 2.65
CNOT3-203ENST00000440571 MED1Q15648 1581 aaPredicted RBP31.57■■■□□ 2.64
CNOT3-203ENST00000440571 TMC1Q8TDI8 760 aa31.56■■■□□ 2.64
CNOT3-203ENST00000440571 TNS3Q68CZ2 1445 aa31.55■■■□□ 2.64
CNOT3-203ENST00000440571 ZNF692Q9BU19 519 aaPredicted RBP31.54■■■□□ 2.64
CNOT3-203ENST00000440571 SHPRHQ149N8 1683 aa31.54■■■□□ 2.64
CNOT3-203ENST00000440571 PLEKHG5O94827 1062 aa31.53■■■□□ 2.64
CNOT3-203ENST00000440571 ADAMTS2O95450 1211 aa31.53■■■□□ 2.64
CNOT3-203ENST00000440571 ARHGEF10O15013 1369 aa31.53■■■□□ 2.64
CNOT3-203ENST00000440571 HSPA5P11021 654 aaKnown RBP31.52■■■□□ 2.64
CNOT3-203ENST00000440571 CDCA8Q53HL2 280 aa31.51■■■□□ 2.63
CNOT3-203ENST00000440571 SLC12A5Q9H2X9 1139 aa31.5■■■□□ 2.63
CNOT3-203ENST00000440571 ITSN1Q15811 1721 aa31.49■■■□□ 2.63
CNOT3-203ENST00000440571 HAP1P54257 671 aaPredicted RBP31.49■■■□□ 2.63
CNOT3-203ENST00000440571 LRP6O75581 1613 aa31.49■■■□□ 2.63
CNOT3-203ENST00000440571 CABLES1Q8TDN4 633 aa31.48■■■□□ 2.63
CNOT3-203ENST00000440571 TOPAZ1Q8N9V7 1692 aa31.46■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms