RNA–Protein interactions for RNA: ENST00000440053.1

VIL1-204, Transcript of villin 1, humanhuman

TSL 1 (best) BASIC

Gene VIL1, Length 1,454 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIL1-204ENST00000440053 DHX57Q6P158 1386 aaKnown RBP30.3■■■□□ 2.44
VIL1-204ENST00000440053 POTEAQ6S8J7 498 aa30.29■■■□□ 2.44
VIL1-204ENST00000440053 NUTM2BA6NNL0 878 aaPredicted RBP30.28■■■□□ 2.44
VIL1-204ENST00000440053 NUTM2EB1AL46 878 aaPredicted RBP30.28■■■□□ 2.44
VIL1-204ENST00000440053 NUTM2AQ8IVF1 878 aaPredicted RBP30.28■■■□□ 2.44
VIL1-204ENST00000440053 SAFB2Q14151 953 aaKnown RBP eCLIP30.27■■■□□ 2.44
VIL1-204ENST00000440053 ESCO1Q5FWF5 840 aa30.27■■■□□ 2.44
VIL1-204ENST00000440053 LRRC59Q96AG4 307 aaKnown RBP30.27■■■□□ 2.44
VIL1-204ENST00000440053 LRP6O75581 1613 aa30.27■■■□□ 2.44
VIL1-204ENST00000440053 SPATA31A6Q5VVP1 1343 aa30.27■■■□□ 2.44
VIL1-204ENST00000440053 SIRT1Q96EB6 747 aa30.26■■■□□ 2.44
VIL1-204ENST00000440053 NHSL1Q5SYE7 1610 aa30.26■■■□□ 2.43
VIL1-204ENST00000440053 PRAM1Q96QH2 718 aa30.25■■■□□ 2.43
VIL1-204ENST00000440053 KNDC1Q76NI1 1749 aa30.22■■■□□ 2.43
VIL1-204ENST00000440053 MEX3CQ5U5Q3 659 aaKnown RBP30.22■■■□□ 2.43
VIL1-204ENST00000440053 TRAK1Q9UPV9 953 aa30.22■■■□□ 2.43
VIL1-204ENST00000440053 CDC42BPGQ6DT37 1551 aa30.2■■■□□ 2.43
VIL1-204ENST00000440053 SHPRHQ149N8 1683 aa30.2■■■□□ 2.43
VIL1-204ENST00000440053 SOS2Q07890 1332 aaPredicted RBP30.19■■■□□ 2.42
VIL1-204ENST00000440053 LAMC1P11047 1609 aa30.18■■■□□ 2.42
VIL1-204ENST00000440053 FOXO3O43524 673 aa30.18■■■□□ 2.42
VIL1-204ENST00000440053 XPCQ01831 940 aaPredicted RBP30.18■■■□□ 2.42
VIL1-204ENST00000440053 STAC3Q96MF2 364 aa30.18■■■□□ 2.42
VIL1-204ENST00000440053 POGKQ9P215 609 aa30.18■■■□□ 2.42
VIL1-204ENST00000440053 ADGRB1O14514 1584 aa30.17■■■□□ 2.42
VIL1-204ENST00000440053 PNPLA6Q8IY17 1366 aa30.16■■■□□ 2.42
VIL1-204ENST00000440053 SIN3AQ96ST3 1273 aa30.12■■■□□ 2.41
VIL1-204ENST00000440053 HIRIP3Q9BW71 556 aaPredicted RBP30.12■■■□□ 2.41
VIL1-204ENST00000440053 NPHP3Q7Z494 1330 aa30.09■■■□□ 2.41
VIL1-204ENST00000440053 DLC1Q96QB1 1528 aa30.08■■■□□ 2.41
VIL1-204ENST00000440053 MINK1Q8N4C8 1332 aaPredicted RBP30.08■■■□□ 2.41
VIL1-204ENST00000440053 FMN2Q9NZ56 1722 aa30.07■■■□□ 2.4
VIL1-204ENST00000440053 ADAMTS2O95450 1211 aa30.06■■■□□ 2.4
VIL1-204ENST00000440053 NBPF1Q3BBV0 1214 aa30.06■■■□□ 2.4
VIL1-204ENST00000440053 NEUROD1Q13562 356 aa30.05■■■□□ 2.4
VIL1-204ENST00000440053 C8orf37Q96NL8 207 aa30.05■■■□□ 2.4
VIL1-204ENST00000440053 PXDNQ92626 1479 aa30.04■■■□□ 2.4
VIL1-204ENST00000440053 ZNF772Q68DY9 489 aaPredicted RBP30.04■■■□□ 2.4
VIL1-204ENST00000440053 PHF8Q9UPP1 1060 aa30.03■■■□□ 2.4
VIL1-204ENST00000440053 AFF2P51816 1311 aa30.03■■■□□ 2.4
VIL1-204ENST00000440053 L3MBTL2Q969R5 705 aa30.02■■■□□ 2.4
VIL1-204ENST00000440053 KRT28Q7Z3Y7 464 aa30.01■■■□□ 2.4
VIL1-204ENST00000440053 PMFBP1Q8TBY8 1022 aa30■■■□□ 2.39
VIL1-204ENST00000440053 RGPD8O14715 1765 aaPredicted RBP30■■■□□ 2.39
VIL1-204ENST00000440053 NGLY1Q96IV0 654 aa29.97■■■□□ 2.39
VIL1-204ENST00000440053 WASLO00401 505 aaPredicted RBP29.96■■■□□ 2.39
VIL1-204ENST00000440053 PRR36Q9H6K5 1346 aa29.95■■■□□ 2.39
VIL1-204ENST00000440053 TRIM26Q12899 539 aaPredicted RBP29.95■■■□□ 2.39
VIL1-204ENST00000440053 SPATA31A3Q5VYP0 1347 aa29.94■■■□□ 2.38
VIL1-204ENST00000440053 PSME1Q06323 249 aa29.93■■■□□ 2.38
VIL1-204ENST00000440053 USP32Q8NFA0 1604 aa29.92■■■□□ 2.38
VIL1-204ENST00000440053 PLEKHG5O94827 1062 aa29.92■■■□□ 2.38
VIL1-204ENST00000440053 RXRBP28702 533 aa29.92■■■□□ 2.38
VIL1-204ENST00000440053 QTRT2Q9H974 415 aaKnown RBP29.92■■■□□ 2.38
VIL1-204ENST00000440053 ADGRB2O60241 1585 aa29.91■■■□□ 2.38
VIL1-204ENST00000440053 KIF1AQ12756 1690 aa29.9■■■□□ 2.38
VIL1-204ENST00000440053 ANKARQ7Z5J8 1434 aa29.89■■■□□ 2.38
VIL1-204ENST00000440053 COL22A1Q8NFW1 1626 aaPredicted RBP29.89■■■□□ 2.38
VIL1-204ENST00000440053 ARHGEF28Q8N1W1 1705 aaKnown RBP29.89■■■□□ 2.38
VIL1-204ENST00000440053 LMOD2Q6P5Q4 547 aa29.87■■■□□ 2.37
VIL1-204ENST00000440053 CDK19Q9BWU1 502 aa29.87■■■□□ 2.37
VIL1-204ENST00000440053 CABLES1Q8TDN4 633 aa29.86■■■□□ 2.37
VIL1-204ENST00000440053 KIAA1210Q9ULL0 1709 aa29.86■■■□□ 2.37
VIL1-204ENST00000440053 NUDT16Q96DE0 195 aaKnown RBP29.85■■■□□ 2.37
VIL1-204ENST00000440053 USP21Q9UK80 565 aa29.85■■■□□ 2.37
VIL1-204ENST00000440053 TULP4Q9NRJ4 1543 aa29.83■■■□□ 2.37
VIL1-204ENST00000440053 FNBP4Q8N3X1 1017 aaPredicted RBP29.83■■■□□ 2.37
VIL1-204ENST00000440053 TNS3Q68CZ2 1445 aa29.81■■■□□ 2.36
VIL1-204ENST00000440053 NGDNQ8NEJ9 315 aaKnown RBP29.8■■■□□ 2.36
VIL1-204ENST00000440053 SBNO1A3KN83 1393 aa29.8■■■□□ 2.36
VIL1-204ENST00000440053 EIF3AQ14152 1382 aaKnown RBP29.8■■■□□ 2.36
VIL1-204ENST00000440053 RBM6P78332 1123 aaKnown RBP29.79■■■□□ 2.36
VIL1-204ENST00000440053 NBPF8Q3BBV2 869 aa29.79■■■□□ 2.36
VIL1-204ENST00000440053 CENPJQ9HC77 1338 aaPredicted RBP29.77■■■□□ 2.36
VIL1-204ENST00000440053 GPRASP1Q5JY77 1395 aa29.75■■■□□ 2.35
VIL1-204ENST00000440053 HAP1P54257 671 aaPredicted RBP29.75■■■□□ 2.35
VIL1-204ENST00000440053 ATP7BP35670 1465 aa29.75■■■□□ 2.35
VIL1-204ENST00000440053 PAK3O75914 559 aaPredicted RBP29.74■■■□□ 2.35
VIL1-204ENST00000440053 TRPC5Q9UL62 973 aaPredicted RBP29.74■■■□□ 2.35
VIL1-204ENST00000440053 BCL9LQ86UU0 1499 aa29.73■■■□□ 2.35
VIL1-204ENST00000440053 CABP2Q9NPB3 220 aa29.73■■■□□ 2.35
VIL1-204ENST00000440053 ARHGEF10O15013 1369 aa29.71■■■□□ 2.35
VIL1-204ENST00000440053 SRPK2P78362 688 aaKnown RBP29.7■■■□□ 2.35
VIL1-204ENST00000440053 CCDC61Q9Y6R9 512 aa29.7■■■□□ 2.35
VIL1-204ENST00000440053 ROCK2O75116 1388 aaKnown RBP29.7■■■□□ 2.34
VIL1-204ENST00000440053 TRPM1Q7Z4N2 1603 aa29.69■■■□□ 2.34
VIL1-204ENST00000440053 ACEP12821 1306 aa29.69■■■□□ 2.34
VIL1-204ENST00000440053 RGS12O14924 1447 aa29.68■■■□□ 2.34
VIL1-204ENST00000440053 ATRNO75882 1429 aa29.68■■■□□ 2.34
VIL1-204ENST00000440053 TRPM3Q9HCF6 1732 aaPredicted RBP29.68■■■□□ 2.34
VIL1-204ENST00000440053 CDK12Q9NYV4 1490 aaPredicted RBP29.68■■■□□ 2.34
VIL1-204ENST00000440053 MARF1Q9Y4F3 1742 aaKnown RBP29.68■■■□□ 2.34
VIL1-204ENST00000440053 PLEKHG3A1L390 1219 aa29.66■■■□□ 2.34
VIL1-204ENST00000440053 FAM83GA6ND36 823 aa29.66■■■□□ 2.34
VIL1-204ENST00000440053 UNC5CLQ8IV45 518 aa29.66■■■□□ 2.34
VIL1-204ENST00000440053 UPF1Q92900 1129 aaKnown RBP eCLIP29.65■■■□□ 2.34
VIL1-204ENST00000440053 SLIT2O94813 1529 aa29.64■■■□□ 2.34
VIL1-204ENST00000440053 NUTM2GQ5VZR2 741 aa29.63■■■□□ 2.33
VIL1-204ENST00000440053 TONSLQ96HA7 1378 aa29.62■■■□□ 2.33
VIL1-204ENST00000440053 GJD4Q96KN9 370 aaPredicted RBP29.62■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms