RNA–Protein interactions for RNA: ENST00000439765.3

CCDC188-201, Transcript of coiled-coil domain containing 188, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC188, Length 1,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-201ENST00000439765 CDC42BPGQ6DT37 1551 aa25.62■■□□□ 1.69
CCDC188-201ENST00000439765 NEUROD1Q13562 356 aa25.6■■□□□ 1.69
CCDC188-201ENST00000439765 C14orf93Q9H972 538 aaKnown RBP25.6■■□□□ 1.69
CCDC188-201ENST00000439765 ADGRB1O14514 1584 aa25.6■■□□□ 1.69
CCDC188-201ENST00000439765 YTHDC2Q9H6S0 1430 aaKnown RBP25.59■■□□□ 1.69
CCDC188-201ENST00000439765 POTEAQ6S8J7 498 aa25.59■■□□□ 1.69
CCDC188-201ENST00000439765 STK26Q9P289 416 aa25.59■■□□□ 1.69
CCDC188-201ENST00000439765 LRPPRCP42704 1394 aaKnown RBP25.59■■□□□ 1.69
CCDC188-201ENST00000439765 KIAA1210Q9ULL0 1709 aa25.58■■□□□ 1.68
CCDC188-201ENST00000439765 STAC3Q96MF2 364 aa25.54■■□□□ 1.68
CCDC188-201ENST00000439765 ABCC11Q96J66 1382 aa25.54■■□□□ 1.68
CCDC188-201ENST00000439765 LRRC59Q96AG4 307 aaKnown RBP25.53■■□□□ 1.68
CCDC188-201ENST00000439765 L3MBTL2Q969R5 705 aa25.52■■□□□ 1.68
CCDC188-201ENST00000439765 ARHGEF28Q8N1W1 1705 aaKnown RBP25.51■■□□□ 1.67
CCDC188-201ENST00000439765 FMN2Q9NZ56 1722 aa25.51■■□□□ 1.67
CCDC188-201ENST00000439765 PNPLA6Q8IY17 1366 aa25.5■■□□□ 1.67
CCDC188-201ENST00000439765 PLEKHH1Q9ULM0 1364 aa25.5■■□□□ 1.67
CCDC188-201ENST00000439765 DDX17Q92841 729 aaKnown RBP25.49■■□□□ 1.67
CCDC188-201ENST00000439765 TRPM1Q7Z4N2 1603 aa25.49■■□□□ 1.67
CCDC188-201ENST00000439765 MEX3CQ5U5Q3 659 aaKnown RBP25.48■■□□□ 1.67
CCDC188-201ENST00000439765 DLC1Q96QB1 1528 aa25.48■■□□□ 1.67
CCDC188-201ENST00000439765 WAPLQ7Z5K2 1190 aa25.47■■□□□ 1.67
CCDC188-201ENST00000439765 ORAI2Q96SN7 254 aa25.47■■□□□ 1.67
CCDC188-201ENST00000439765 SOS2Q07890 1332 aaPredicted RBP25.47■■□□□ 1.67
CCDC188-201ENST00000439765 COL22A1Q8NFW1 1626 aaPredicted RBP25.45■■□□□ 1.67
CCDC188-201ENST00000439765 RGPD8O14715 1765 aaPredicted RBP25.45■■□□□ 1.66
CCDC188-201ENST00000439765 ZNF772Q68DY9 489 aaPredicted RBP25.45■■□□□ 1.66
CCDC188-201ENST00000439765 TONSLQ96HA7 1378 aa25.44■■□□□ 1.66
CCDC188-201ENST00000439765 SIRT1Q96EB6 747 aa25.43■■□□□ 1.66
CCDC188-201ENST00000439765 KIF1AQ12756 1690 aa25.42■■□□□ 1.66
CCDC188-201ENST00000439765 NUTM2BA6NNL0 878 aaPredicted RBP25.42■■□□□ 1.66
CCDC188-201ENST00000439765 NUTM2EB1AL46 878 aaPredicted RBP25.42■■□□□ 1.66
CCDC188-201ENST00000439765 NUTM2AQ8IVF1 878 aaPredicted RBP25.42■■□□□ 1.66
CCDC188-201ENST00000439765 TRAK1Q9UPV9 953 aa25.42■■□□□ 1.66
CCDC188-201ENST00000439765 PRAM1Q96QH2 718 aa25.4■■□□□ 1.66
CCDC188-201ENST00000439765 PXDNQ92626 1479 aa25.4■■□□□ 1.66
CCDC188-201ENST00000439765 SAFB2Q14151 953 aaKnown RBP eCLIP25.4■■□□□ 1.66
CCDC188-201ENST00000439765 MARF1Q9Y4F3 1742 aaKnown RBP25.39■■□□□ 1.66
CCDC188-201ENST00000439765 CCER1Q8TC90 406 aaPredicted RBP25.39■■□□□ 1.65
CCDC188-201ENST00000439765 NPHP3Q7Z494 1330 aa25.39■■□□□ 1.65
CCDC188-201ENST00000439765 ADGRB2O60241 1585 aa25.38■■□□□ 1.65
CCDC188-201ENST00000439765 NBPF1Q3BBV0 1214 aa25.37■■□□□ 1.65
CCDC188-201ENST00000439765 ESCO1Q5FWF5 840 aa25.37■■□□□ 1.65
CCDC188-201ENST00000439765 POGKQ9P215 609 aa25.36■■□□□ 1.65
CCDC188-201ENST00000439765 AFF2P51816 1311 aa25.35■■□□□ 1.65
CCDC188-201ENST00000439765 CDK12Q9NYV4 1490 aaPredicted RBP25.34■■□□□ 1.65
CCDC188-201ENST00000439765 QRICH2Q9H0J4 1663 aa25.33■■□□□ 1.65
CCDC188-201ENST00000439765 NUTM2FA1L443 756 aa25.31■■□□□ 1.64
CCDC188-201ENST00000439765 ROCK2O75116 1388 aaKnown RBP25.3■■□□□ 1.64
CCDC188-201ENST00000439765 FOXO3O43524 673 aa25.3■■□□□ 1.64
CCDC188-201ENST00000439765 NBPF8Q3BBV2 869 aa25.3■■□□□ 1.64
CCDC188-201ENST00000439765 C8orf37Q96NL8 207 aa25.3■■□□□ 1.64
CCDC188-201ENST00000439765 USP32Q8NFA0 1604 aa25.3■■□□□ 1.64
CCDC188-201ENST00000439765 MINK1Q8N4C8 1332 aaPredicted RBP25.29■■□□□ 1.64
CCDC188-201ENST00000439765 CLSPNQ9HAW4 1339 aa25.29■■□□□ 1.64
CCDC188-201ENST00000439765 HIRIP3Q9BW71 556 aaPredicted RBP25.28■■□□□ 1.64
CCDC188-201ENST00000439765 RXRBP28702 533 aa25.28■■□□□ 1.64
CCDC188-201ENST00000439765 RALGAPBQ86X10 1494 aa25.27■■□□□ 1.64
CCDC188-201ENST00000439765 ADAMTS2O95450 1211 aa25.26■■□□□ 1.63
CCDC188-201ENST00000439765 ANKARQ7Z5J8 1434 aa25.24■■□□□ 1.63
CCDC188-201ENST00000439765 XPCQ01831 940 aaPredicted RBP25.23■■□□□ 1.63
CCDC188-201ENST00000439765 NGLY1Q96IV0 654 aa25.23■■□□□ 1.63
CCDC188-201ENST00000439765 ITSN1Q15811 1721 aa25.22■■□□□ 1.63
CCDC188-201ENST00000439765 TULP4Q9NRJ4 1543 aa25.22■■□□□ 1.63
CCDC188-201ENST00000439765 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.22■■□□□ 1.63
CCDC188-201ENST00000439765 GPRASP1Q5JY77 1395 aa25.21■■□□□ 1.63
CCDC188-201ENST00000439765 ABCA3Q99758 1704 aa25.21■■□□□ 1.63
CCDC188-201ENST00000439765 SPATA31A3Q5VYP0 1347 aa25.2■■□□□ 1.63
CCDC188-201ENST00000439765 RBM6P78332 1123 aaKnown RBP25.2■■□□□ 1.62
CCDC188-201ENST00000439765 FNBP4Q8N3X1 1017 aaPredicted RBP25.2■■□□□ 1.62
CCDC188-201ENST00000439765 QTRT2Q9H974 415 aaKnown RBP25.2■■□□□ 1.62
CCDC188-201ENST00000439765 RGS12O14924 1447 aa25.19■■□□□ 1.62
CCDC188-201ENST00000439765 PHF8Q9UPP1 1060 aa25.19■■□□□ 1.62
CCDC188-201ENST00000439765 CENPJQ9HC77 1338 aaPredicted RBP25.19■■□□□ 1.62
CCDC188-201ENST00000439765 TRPM3Q9HCF6 1732 aaPredicted RBP25.17■■□□□ 1.62
CCDC188-201ENST00000439765 TOPAZ1Q8N9V7 1692 aa25.17■■□□□ 1.62
CCDC188-201ENST00000439765 TNS3Q68CZ2 1445 aa25.17■■□□□ 1.62
CCDC188-201ENST00000439765 KRT28Q7Z3Y7 464 aa25.16■■□□□ 1.62
CCDC188-201ENST00000439765 USP21Q9UK80 565 aa25.16■■□□□ 1.62
CCDC188-201ENST00000439765 EIF3AQ14152 1382 aaKnown RBP25.16■■□□□ 1.62
CCDC188-201ENST00000439765 WASLO00401 505 aaPredicted RBP25.15■■□□□ 1.62
CCDC188-201ENST00000439765 ATP7BP35670 1465 aa25.15■■□□□ 1.62
CCDC188-201ENST00000439765 CARD11Q9BXL7 1154 aa25.15■■□□□ 1.62
CCDC188-201ENST00000439765 SBNO1A3KN83 1393 aa25.14■■□□□ 1.62
CCDC188-201ENST00000439765 ATRNO75882 1429 aa25.14■■□□□ 1.62
CCDC188-201ENST00000439765 TRPC5Q9UL62 973 aaPredicted RBP25.14■■□□□ 1.61
CCDC188-201ENST00000439765 BCL9LQ86UU0 1499 aa25.13■■□□□ 1.61
CCDC188-201ENST00000439765 ALS2Q96Q42 1657 aa25.13■■□□□ 1.61
CCDC188-201ENST00000439765 PRR36Q9H6K5 1346 aa25.13■■□□□ 1.61
CCDC188-201ENST00000439765 PSME1Q06323 249 aa25.12■■□□□ 1.61
CCDC188-201ENST00000439765 UPF1Q92900 1129 aaKnown RBP eCLIP25.12■■□□□ 1.61
CCDC188-201ENST00000439765 NWD2Q9ULI1 1742 aa25.11■■□□□ 1.61
CCDC188-201ENST00000439765 PLCH1Q4KWH8 1693 aa25.1■■□□□ 1.61
CCDC188-201ENST00000439765 SLIT2O94813 1529 aa25.09■■□□□ 1.61
CCDC188-201ENST00000439765 ARHGEF10O15013 1369 aa25.09■■□□□ 1.61
CCDC188-201ENST00000439765 CDK19Q9BWU1 502 aa25.09■■□□□ 1.61
CCDC188-201ENST00000439765 TIMELESSQ9UNS1 1208 aa25.09■■□□□ 1.61
CCDC188-201ENST00000439765 PMFBP1Q8TBY8 1022 aa25.07■■□□□ 1.6
CCDC188-201ENST00000439765 CRYBG1Q9Y4K1 1723 aa25.06■■□□□ 1.6
CCDC188-201ENST00000439765 NUDT16Q96DE0 195 aaKnown RBP25.04■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms