RNA–Protein interactions for RNA: ENST00000438796.6

LRCH3-206, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

APPRIS P5 TSL 2 BASIC

Gene LRCH3, Length 7,394 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-206ENST00000438796 DNAJC2Q99543 621 aaKnown RBP16.68■□□□□ 0.26
LRCH3-206ENST00000438796 REC8O95072 547 aa16.68■□□□□ 0.26
LRCH3-206ENST00000438796 RUFY1Q96T51 708 aa16.68■□□□□ 0.26
LRCH3-206ENST00000438796 UACAQ9BZF9 1416 aa16.68■□□□□ 0.26
LRCH3-206ENST00000438796 WWC2Q6AWC2 1192 aa16.68■□□□□ 0.26
LRCH3-206ENST00000438796 PHLDB1Q86UU1 1377 aa16.67■□□□□ 0.26
LRCH3-206ENST00000438796 PDE4AP27815 886 aa16.67■□□□□ 0.26
LRCH3-206ENST00000438796 LNPKQ9C0E8 428 aa16.67■□□□□ 0.26
LRCH3-206ENST00000438796 PDE3BQ13370 1112 aa16.66■□□□□ 0.26
LRCH3-206ENST00000438796 OFD1O75665 1012 aa16.66■□□□□ 0.26
LRCH3-206ENST00000438796 SF3B2Q13435 895 aaKnown RBP16.66■□□□□ 0.26
LRCH3-206ENST00000438796 HSP90AA2PQ14568 343 aaPredicted RBP16.66■□□□□ 0.26
LRCH3-206ENST00000438796 BRMS1Q9HCU9 246 aa16.66■□□□□ 0.26
LRCH3-206ENST00000438796 CABP2Q9NPB3 220 aa16.66■□□□□ 0.26
LRCH3-206ENST00000438796 KIF6Q6ZMV9 814 aa16.66■□□□□ 0.26
LRCH3-206ENST00000438796 RRP1P56182 461 aaKnown RBP16.65■□□□□ 0.26
LRCH3-206ENST00000438796 CCDC88BA6NC98 1476 aa16.65■□□□□ 0.26
LRCH3-206ENST00000438796 PIP4K2BP78356 416 aa16.65■□□□□ 0.26
LRCH3-206ENST00000438796 RBM5P52756 815 aaKnown RBP eCLIP16.64■□□□□ 0.25
LRCH3-206ENST00000438796 DZIP1LQ8IYY4 767 aaKnown RBP16.64■□□□□ 0.25
LRCH3-206ENST00000438796 TSHZ2Q9NRE2 1034 aa16.64■□□□□ 0.25
LRCH3-206ENST00000438796 DDX19BQ9UMR2 479 aa16.64■□□□□ 0.25
LRCH3-206ENST00000438796 ESCO1Q5FWF5 840 aa16.64■□□□□ 0.25
LRCH3-206ENST00000438796 BRPF1P55201 1214 aaPredicted RBP16.63■□□□□ 0.25
LRCH3-206ENST00000438796 CAGE1Q8TC20 777 aa16.63■□□□□ 0.25
LRCH3-206ENST00000438796 GGNBP2Q9H3C7 697 aa16.63■□□□□ 0.25
LRCH3-206ENST00000438796 IFT57Q9NWB7 429 aa16.63■□□□□ 0.25
LRCH3-206ENST00000438796 ERC2O15083 957 aa16.62■□□□□ 0.25
LRCH3-206ENST00000438796 SMARCA2P51531 1590 aa16.62■□□□□ 0.25
LRCH3-206ENST00000438796 SKOR2Q2VWA4 1001 aaPredicted RBP16.62■□□□□ 0.25
LRCH3-206ENST00000438796 OLFM4Q6UX06 510 aa16.62■□□□□ 0.25
LRCH3-206ENST00000438796 CDK5RAP3Q96JB5 506 aa16.62■□□□□ 0.25
LRCH3-206ENST00000438796 ABTB2Q8N961 1025 aa16.62■□□□□ 0.25
LRCH3-206ENST00000438796 RSPH4AQ5TD94 716 aa16.61■□□□□ 0.25
LRCH3-206ENST00000438796 CCDC73Q6ZRK6 1079 aa16.61■□□□□ 0.25
LRCH3-206ENST00000438796 UBTFL1P0CB47 393 aaPredicted RBP16.61■□□□□ 0.25
LRCH3-206ENST00000438796 INTS3Q68E01 1043 aaKnown RBP16.61■□□□□ 0.25
LRCH3-206ENST00000438796 AK7Q96M32 723 aa16.61■□□□□ 0.25
LRCH3-206ENST00000438796 ROCK1Q13464 1354 aa16.6■□□□□ 0.25
LRCH3-206ENST00000438796 CEBPZQ03701 1054 aaKnown RBP16.6■□□□□ 0.25
LRCH3-206ENST00000438796 NLRP6P59044 892 aa16.6■□□□□ 0.25
LRCH3-206ENST00000438796 FSD1Q9BTV5 496 aa16.6■□□□□ 0.25
LRCH3-206ENST00000438796 API5Q9BZZ5 524 aaKnown RBP16.6■□□□□ 0.25
LRCH3-206ENST00000438796 CNNM1Q9NRU3 951 aa16.6■□□□□ 0.25
LRCH3-206ENST00000438796 TMEM132EQ6IEE7 984 aa16.6■□□□□ 0.25
LRCH3-206ENST00000438796 KRT18P05783 430 aaKnown RBP16.59■□□□□ 0.25
LRCH3-206ENST00000438796 DDX54Q8TDD1 881 aaKnown RBP16.59■□□□□ 0.25
LRCH3-206ENST00000438796 USP47Q96K76 1375 aa16.59■□□□□ 0.25
LRCH3-206ENST00000438796 ZHX3Q9H4I2 956 aa16.59■□□□□ 0.25
LRCH3-206ENST00000438796 XBP1P17861 261 aa16.59■□□□□ 0.25
LRCH3-206ENST00000438796 FAM13BQ9NYF5 915 aa16.59■□□□□ 0.25
LRCH3-206ENST00000438796 TTC39AQ5SRH9 613 aa16.58■□□□□ 0.25
LRCH3-206ENST00000438796 VSIG10Q8N0Z9 540 aa16.58■□□□□ 0.24
LRCH3-206ENST00000438796 TBC1D2BQ9UPU7 963 aa16.58■□□□□ 0.24
LRCH3-206ENST00000438796 MAP4K4O95819 1239 aaPredicted RBP16.57■□□□□ 0.24
LRCH3-206ENST00000438796 PANK1Q8TE04 598 aa16.57■□□□□ 0.24
LRCH3-206ENST00000438796 TEX35Q5T0J7 233 aa16.57■□□□□ 0.24
LRCH3-206ENST00000438796 MNS1Q8NEH6 495 aa16.57■□□□□ 0.24
LRCH3-206ENST00000438796 SPINK5Q9NQ38 1064 aaPredicted RBP16.57■□□□□ 0.24
LRCH3-206ENST00000438796 RUNDC1Q96C34 613 aa16.56■□□□□ 0.24
LRCH3-206ENST00000438796 DHX37Q8IY37 1157 aaKnown RBP16.56■□□□□ 0.24
LRCH3-206ENST00000438796 FMNL2Q96PY5 1086 aa16.56■□□□□ 0.24
LRCH3-206ENST00000438796 CNTROBQ8N137 903 aa16.56■□□□□ 0.24
LRCH3-206ENST00000438796 C1orf115Q9H7X2 142 aa16.56■□□□□ 0.24
LRCH3-206ENST00000438796 NINLQ9Y2I6 1382 aa16.56■□□□□ 0.24
LRCH3-206ENST00000438796 SIL1Q9H173 461 aa16.55■□□□□ 0.24
LRCH3-206ENST00000438796 CHMP4BP1P59074 171 aa16.55■□□□□ 0.24
LRCH3-206ENST00000438796 SYCP1Q15431 976 aa16.55■□□□□ 0.24
LRCH3-206ENST00000438796 SDF4Q9BRK5 362 aa16.55■□□□□ 0.24
LRCH3-206ENST00000438796 MYL6BP14649 208 aa16.54■□□□□ 0.24
LRCH3-206ENST00000438796 GSE1Q14687 1217 aa16.54■□□□□ 0.24
LRCH3-206ENST00000438796 WIZO95785 1651 aa16.54■□□□□ 0.24
LRCH3-206ENST00000438796 SMC2O95347 1197 aa16.54■□□□□ 0.24
LRCH3-206ENST00000438796 CCDC173Q0VFZ6 552 aa16.54■□□□□ 0.24
LRCH3-206ENST00000438796 OSCARQ8IYS5 282 aa16.54■□□□□ 0.24
LRCH3-206ENST00000438796 SART3Q15020 963 aaKnown RBP16.54■□□□□ 0.24
LRCH3-206ENST00000438796 HSP90AB4PQ58FF6 505 aa16.54■□□□□ 0.24
LRCH3-206ENST00000438796 MATR3P43243 847 aaKnown RBP eCLIP16.53■□□□□ 0.24
LRCH3-206ENST00000438796 STK3Q13188 491 aa16.53■□□□□ 0.24
LRCH3-206ENST00000438796 PIBF1Q8WXW3 757 aa16.53■□□□□ 0.24
LRCH3-206ENST00000438796 SLC3A2P08195 630 aaKnown RBP16.53■□□□□ 0.24
LRCH3-206ENST00000438796 GNAI1P63096 354 aa16.53■□□□□ 0.24
LRCH3-206ENST00000438796 MAP7D2Q96T17 732 aa16.53■□□□□ 0.24
LRCH3-206ENST00000438796 MAGEC2Q9UBF1 373 aaPredicted RBP16.53■□□□□ 0.24
LRCH3-206ENST00000438796 RNF214Q8ND24 703 aa16.53■□□□□ 0.24
LRCH3-206ENST00000438796 RAPGEF2Q9Y4G8 1499 aa16.53■□□□□ 0.24
LRCH3-206ENST00000438796 BICDL1Q6ZP65 573 aa16.52■□□□□ 0.24
LRCH3-206ENST00000438796 PTPRGP23470 1445 aa16.52■□□□□ 0.24
LRCH3-206ENST00000438796 SURF6O75683 361 aaKnown RBP16.52■□□□□ 0.24
LRCH3-206ENST00000438796 NEFHP12036 1026 aa16.52■□□□□ 0.24
LRCH3-206ENST00000438796 ANKRD62A6NC57 917 aa16.52■□□□□ 0.23
LRCH3-206ENST00000438796 ZSCAN29Q8IWY8 852 aaPredicted RBP16.52■□□□□ 0.23
LRCH3-206ENST00000438796 CDR1P51861 262 aa16.51■□□□□ 0.23
LRCH3-206ENST00000438796 PROSER2Q86WR7 435 aaPredicted RBP16.51■□□□□ 0.23
LRCH3-206ENST00000438796 TOM1L2Q6ZVM7 507 aa16.51■□□□□ 0.23
LRCH3-206ENST00000438796 PDCL3Q9H2J4 239 aa16.5■□□□□ 0.23
LRCH3-206ENST00000438796 WASHC2AQ641Q2 1341 aa16.5■□□□□ 0.23
LRCH3-206ENST00000438796 CABP4P57796 275 aa16.5■□□□□ 0.23
LRCH3-206ENST00000438796 MPHOSPH10O00566 681 aaKnown RBP16.5■□□□□ 0.23
LRCH3-206ENST00000438796 PPM1FP49593 454 aaPredicted RBP16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms