RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 PCDHGC3Q9UN70 934 aa7.98□□□□□ -1.13
HMGB3P12-201ENST00000438745 FDX1P10109 184 aa7.97□□□□□ -1.13
HMGB3P12-201ENST00000438745 NDUFV2P19404 249 aa7.97□□□□□ -1.13
HMGB3P12-201ENST00000438745 MMP16P51512 607 aa7.97□□□□□ -1.13
HMGB3P12-201ENST00000438745 USB1Q9BQ65 265 aaKnown RBP7.97□□□□□ -1.13
HMGB3P12-201ENST00000438745 TBC1D2Q9BYX2 928 aa7.97□□□□□ -1.13
HMGB3P12-201ENST00000438745 SPTLC1O15269 473 aa7.95□□□□□ -1.14
HMGB3P12-201ENST00000438745 PLA2G2CQ5R387 149 aa7.95□□□□□ -1.14
HMGB3P12-201ENST00000438745 RSBN1LQ6PCB5 846 aaPredicted RBP7.94□□□□□ -1.14
HMGB3P12-201ENST00000438745 LIAT1Q6ZQX7 453 aa7.94□□□□□ -1.14
HMGB3P12-201ENST00000438745 SYMPKQ92797 1274 aaKnown RBP7.94□□□□□ -1.14
HMGB3P12-201ENST00000438745 DXOO77932 396 aaKnown RBP7.93□□□□□ -1.14
HMGB3P12-201ENST00000438745 SLC19A1P41440 591 aa7.93□□□□□ -1.14
HMGB3P12-201ENST00000438745 TUSC1Q2TAM9 212 aa7.93□□□□□ -1.14
HMGB3P12-201ENST00000438745 RETREG3Q86VR2 466 aa7.93□□□□□ -1.14
HMGB3P12-201ENST00000438745 KDM4CQ9H3R0 1056 aa7.93□□□□□ -1.14
HMGB3P12-201ENST00000438745 PRDM9Q9NQV7 894 aa7.93□□□□□ -1.14
HMGB3P12-201ENST00000438745 SPRYD7Q5W111 196 aa7.92□□□□□ -1.14
HMGB3P12-201ENST00000438745 TRAF7Q6Q0C0 670 aa7.92□□□□□ -1.14
HMGB3P12-201ENST00000438745 GPBP1L1Q9HC44 474 aaPredicted RBP7.92□□□□□ -1.14
HMGB3P12-201ENST00000438745 PCDHB15Q9Y5E8 787 aa7.92□□□□□ -1.14
HMGB3P12-201ENST00000438745 MYSM1Q5VVJ2 828 aa7.91□□□□□ -1.14
HMGB3P12-201ENST00000438745 RIC3Q7Z5B4 369 aa7.91□□□□□ -1.14
HMGB3P12-201ENST00000438745 SPDYE5A6NIY4 337 aa7.9□□□□□ -1.14
HMGB3P12-201ENST00000438745 RPIAP49247 311 aa7.9□□□□□ -1.14
HMGB3P12-201ENST00000438745 TPRNQ4KMQ1 711 aa7.9□□□□□ -1.14
HMGB3P12-201ENST00000438745 FAM117AQ9C073 453 aa7.9□□□□□ -1.14
HMGB3P12-201ENST00000438745 FCF1Q9Y324 198 aaKnown RBP7.9□□□□□ -1.14
HMGB3P12-201ENST00000438745 NRG2O14511 850 aaPredicted RBP7.89□□□□□ -1.15
HMGB3P12-201ENST00000438745 MTMR2Q13614 643 aa7.89□□□□□ -1.15
HMGB3P12-201ENST00000438745 LAPTM4AQ15012 233 aa7.89□□□□□ -1.15
HMGB3P12-201ENST00000438745 PRPF38BQ5VTL8 546 aaKnown RBP7.89□□□□□ -1.15
HMGB3P12-201ENST00000438745 ZNF598Q86UK7 904 aaKnown RBP7.89□□□□□ -1.15
HMGB3P12-201ENST00000438745 RSPH6AQ9H0K4 717 aa7.89□□□□□ -1.15
HMGB3P12-201ENST00000438745 LIMD1Q9UGP4 676 aa7.89□□□□□ -1.15
HMGB3P12-201ENST00000438745 PDZRN3Q9UPQ7 1066 aa7.89□□□□□ -1.15
HMGB3P12-201ENST00000438745 PLEKHG3A1L390 1219 aa7.88□□□□□ -1.15
HMGB3P12-201ENST00000438745 C6orf229H3BNL8 230 aa7.88□□□□□ -1.15
HMGB3P12-201ENST00000438745 JUNDP17535 347 aa7.88□□□□□ -1.15
HMGB3P12-201ENST00000438745 HRCP23327 699 aa7.88□□□□□ -1.15
HMGB3P12-201ENST00000438745 DESI1Q6ICB0 168 aa7.88□□□□□ -1.15
HMGB3P12-201ENST00000438745 TRIM67Q6ZTA4 783 aa7.88□□□□□ -1.15
HMGB3P12-201ENST00000438745 DDRGK1Q96HY6 314 aa7.87□□□□□ -1.15
HMGB3P12-201ENST00000438745 LILRB3O75022 631 aa7.86□□□□□ -1.15
HMGB3P12-201ENST00000438745 PRR7Q8TB68 274 aa7.86□□□□□ -1.15
HMGB3P12-201ENST00000438745 GDF9O60383 454 aa7.85□□□□□ -1.15
HMGB3P12-201ENST00000438745 SKIV2LQ15477 1246 aaKnown RBP7.85□□□□□ -1.15
HMGB3P12-201ENST00000438745 ZBTB3Q9H5J0 574 aa7.85□□□□□ -1.15
HMGB3P12-201ENST00000438745 CD2BP2O95400 341 aaKnown RBP7.84□□□□□ -1.15
HMGB3P12-201ENST00000438745 CLK2P49760 499 aaKnown RBP7.84□□□□□ -1.15
HMGB3P12-201ENST00000438745 BRPF1P55201 1214 aaPredicted RBP7.84□□□□□ -1.15
HMGB3P12-201ENST00000438745 PRR20EP86478 221 aa7.84□□□□□ -1.15
HMGB3P12-201ENST00000438745 PRR20CP86479 221 aa7.84□□□□□ -1.15
HMGB3P12-201ENST00000438745 PRR20DP86480 221 aa7.84□□□□□ -1.15
HMGB3P12-201ENST00000438745 PRR20BP86481 221 aa7.84□□□□□ -1.15
HMGB3P12-201ENST00000438745 PRR20AP86496 221 aa7.84□□□□□ -1.15
HMGB3P12-201ENST00000438745 SH3D19Q5HYK7 790 aa7.84□□□□□ -1.15
HMGB3P12-201ENST00000438745 CFAP99D6REC4 459 aa7.83□□□□□ -1.16
HMGB3P12-201ENST00000438745 QPCTQ16769 361 aa7.83□□□□□ -1.16
HMGB3P12-201ENST00000438745 PTPRNQ16849 979 aa7.83□□□□□ -1.16
HMGB3P12-201ENST00000438745 ZNF697Q5TEC3 545 aa7.83□□□□□ -1.16
HMGB3P12-201ENST00000438745 CABLES1Q8TDN4 633 aa7.83□□□□□ -1.16
HMGB3P12-201ENST00000438745 EVA1BQ9NVM1 165 aa7.83□□□□□ -1.16
HMGB3P12-201ENST00000438745 ZBTB24O43167 697 aaPredicted RBP7.82□□□□□ -1.16
HMGB3P12-201ENST00000438745 PTCRAQ6ISU1 281 aaPredicted RBP7.82□□□□□ -1.16
HMGB3P12-201ENST00000438745 LYPD8Q6UX82 237 aa7.82□□□□□ -1.16
HMGB3P12-201ENST00000438745 NUDT12Q9BQG2 462 aa7.82□□□□□ -1.16
HMGB3P12-201ENST00000438745 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.82□□□□□ -1.16
HMGB3P12-201ENST00000438745 POLR3EQ9NVU0 708 aa7.82□□□□□ -1.16
HMGB3P12-201ENST00000438745 NEUROD2Q15784 382 aa7.81□□□□□ -1.16
HMGB3P12-201ENST00000438745 GOPCQ9HD26 462 aa7.81□□□□□ -1.16
HMGB3P12-201ENST00000438745 PKD2L1Q9P0L9 805 aa7.81□□□□□ -1.16
HMGB3P12-201ENST00000438745 CCNYL3P0C7X3 344 aa7.8□□□□□ -1.16
HMGB3P12-201ENST00000438745 TRIM32Q13049 653 aa7.8□□□□□ -1.16
HMGB3P12-201ENST00000438745 CSPP1Q1MSJ5 1256 aa7.8□□□□□ -1.16
HMGB3P12-201ENST00000438745 RTL5Q5HYW3 569 aaPredicted RBP7.8□□□□□ -1.16
HMGB3P12-201ENST00000438745 FBXO31Q5XUX0 539 aaPredicted RBP7.8□□□□□ -1.16
HMGB3P12-201ENST00000438745 PPP2R2DQ66LE6 453 aa7.8□□□□□ -1.16
HMGB3P12-201ENST00000438745 CCDC24Q8N4L8 307 aa7.79□□□□□ -1.16
HMGB3P12-201ENST00000438745 PROCA1Q8NCQ7 364 aaPredicted RBP7.79□□□□□ -1.16
HMGB3P12-201ENST00000438745 NUTM2BA6NNL0 878 aaPredicted RBP7.78□□□□□ -1.16
HMGB3P12-201ENST00000438745 NUTM2EB1AL46 878 aaPredicted RBP7.78□□□□□ -1.16
HMGB3P12-201ENST00000438745 TNFRSF10AO00220 468 aa7.78□□□□□ -1.16
HMGB3P12-201ENST00000438745 PRKCSHP14314 528 aaPredicted RBP7.78□□□□□ -1.16
HMGB3P12-201ENST00000438745 KCNH2Q12809 1159 aa7.78□□□□□ -1.16
HMGB3P12-201ENST00000438745 NUTM2DQ5VT03 806 aaPredicted RBP7.78□□□□□ -1.16
HMGB3P12-201ENST00000438745 NUTM2AQ8IVF1 878 aaPredicted RBP7.78□□□□□ -1.16
HMGB3P12-201ENST00000438745 SKOR1P84550 965 aa7.77□□□□□ -1.17
HMGB3P12-201ENST00000438745 WNT7AO00755 349 aa7.76□□□□□ -1.17
HMGB3P12-201ENST00000438745 PER1O15534 1290 aaPredicted RBP7.76□□□□□ -1.17
HMGB3P12-201ENST00000438745 F12P00748 615 aaPredicted RBP7.76□□□□□ -1.17
HMGB3P12-201ENST00000438745 WNT7BP56706 349 aa7.76□□□□□ -1.17
HMGB3P12-201ENST00000438745 ZNF787Q6DD87 383 aa7.76□□□□□ -1.17
HMGB3P12-201ENST00000438745 IL27Q8NEV9 243 aa7.76□□□□□ -1.17
HMGB3P12-201ENST00000438745 POTECB2RU33 542 aa7.75□□□□□ -1.17
HMGB3P12-201ENST00000438745 TOR4AQ9NXH8 423 aa7.75□□□□□ -1.17
HMGB3P12-201ENST00000438745 MYT1Q01538 1121 aa7.74□□□□□ -1.17
HMGB3P12-201ENST00000438745 UNC93B1Q9H1C4 597 aa7.74□□□□□ -1.17
HMGB3P12-201ENST00000438745 FOXC1Q12948 553 aa7.73□□□□□ -1.17
HMGB3P12-201ENST00000438745 DGAT1O75907 488 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms