RNA–Protein interactions for RNA: ENST00000438224.5

HERPUD2-206, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 811 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-206ENST00000438224 MYOM2P54296 1465 aa12.61□□□□□ -0.39
HERPUD2-206ENST00000438224 ROBO2Q9HCK4 1378 aa12.61□□□□□ -0.39
HERPUD2-206ENST00000438224 ADGRL3Q9HAR2 1447 aa12.61□□□□□ -0.39
HERPUD2-206ENST00000438224 LAMC1P11047 1609 aa12.6□□□□□ -0.39
HERPUD2-206ENST00000438224 COL16A1Q07092 1604 aaPredicted RBP12.6□□□□□ -0.39
HERPUD2-206ENST00000438224 SOCS7O14512 581 aa12.6□□□□□ -0.39
HERPUD2-206ENST00000438224 C14orf37Q86TY3 774 aa12.59□□□□□ -0.39
HERPUD2-206ENST00000438224 SLAIN2Q9P270 581 aa12.59□□□□□ -0.39
HERPUD2-206ENST00000438224 DCCP43146 1447 aa12.59□□□□□ -0.39
HERPUD2-206ENST00000438224 MST1RQ04912 1400 aa12.59□□□□□ -0.39
HERPUD2-206ENST00000438224 DISP3Q9P2K9 1392 aa12.58□□□□□ -0.4
HERPUD2-206ENST00000438224 VASPP50552 380 aaPredicted RBP12.58□□□□□ -0.4
HERPUD2-206ENST00000438224 C19orf44Q9H6X5 657 aa12.58□□□□□ -0.4
HERPUD2-206ENST00000438224 NHSL1Q5SYE7 1610 aa12.58□□□□□ -0.4
HERPUD2-206ENST00000438224 TECPR2O15040 1411 aa12.57□□□□□ -0.4
HERPUD2-206ENST00000438224 AHDC1Q5TGY3 1603 aaPredicted RBP12.57□□□□□ -0.4
HERPUD2-206ENST00000438224 DHX57Q6P158 1386 aaKnown RBP12.56□□□□□ -0.4
HERPUD2-206ENST00000438224 TMEM132EQ6IEE7 984 aa12.56□□□□□ -0.4
HERPUD2-206ENST00000438224 ADGRB1O14514 1584 aa12.56□□□□□ -0.4
HERPUD2-206ENST00000438224 LRPPRCP42704 1394 aaKnown RBP12.56□□□□□ -0.4
HERPUD2-206ENST00000438224 CADPS2Q86UW7 1296 aa12.55□□□□□ -0.4
HERPUD2-206ENST00000438224 U3KPZ7 1027 aaPredicted RBP12.55□□□□□ -0.4
HERPUD2-206ENST00000438224 PLEKHH1Q9ULM0 1364 aa12.55□□□□□ -0.4
HERPUD2-206ENST00000438224 YTHDC2Q9H6S0 1430 aaKnown RBP12.54□□□□□ -0.4
HERPUD2-206ENST00000438224 RGPD8O14715 1765 aaPredicted RBP12.54□□□□□ -0.4
HERPUD2-206ENST00000438224 ATF3P18847 181 aa12.54□□□□□ -0.4
HERPUD2-206ENST00000438224 CFAP70Q5T0N1 1121 aa12.54□□□□□ -0.4
HERPUD2-206ENST00000438224 ILDR2Q71H61 639 aa12.54□□□□□ -0.4
HERPUD2-206ENST00000438224 C14orf93Q9H972 538 aaKnown RBP12.54□□□□□ -0.4
HERPUD2-206ENST00000438224 CDC42BPGQ6DT37 1551 aa12.54□□□□□ -0.4
HERPUD2-206ENST00000438224 SPDYE4A6NLX3 237 aa12.53□□□□□ -0.4
HERPUD2-206ENST00000438224 BRINP3Q76B58 766 aa12.53□□□□□ -0.4
HERPUD2-206ENST00000438224 STK26Q9P289 416 aa12.53□□□□□ -0.4
HERPUD2-206ENST00000438224 FMN2Q9NZ56 1722 aa12.53□□□□□ -0.4
HERPUD2-206ENST00000438224 ABCC11Q96J66 1382 aa12.53□□□□□ -0.4
HERPUD2-206ENST00000438224 SHPRHQ149N8 1683 aa12.52□□□□□ -0.4
HERPUD2-206ENST00000438224 TPRNQ4KMQ1 711 aa12.52□□□□□ -0.41
HERPUD2-206ENST00000438224 C1orf167Q5SNV9 1468 aa12.52□□□□□ -0.41
HERPUD2-206ENST00000438224 WAPLQ7Z5K2 1190 aa12.51□□□□□ -0.41
HERPUD2-206ENST00000438224 ARHGEF28Q8N1W1 1705 aaKnown RBP12.51□□□□□ -0.41
HERPUD2-206ENST00000438224 DCAF11Q8TEB1 546 aa12.5□□□□□ -0.41
HERPUD2-206ENST00000438224 KDM2AQ9Y2K7 1162 aa12.5□□□□□ -0.41
HERPUD2-206ENST00000438224 KIAA1210Q9ULL0 1709 aa12.49□□□□□ -0.41
HERPUD2-206ENST00000438224 DLC1Q96QB1 1528 aa12.49□□□□□ -0.41
HERPUD2-206ENST00000438224 DDX17Q92841 729 aaKnown RBP12.49□□□□□ -0.41
HERPUD2-206ENST00000438224 PROM2Q8N271 834 aa12.48□□□□□ -0.41
HERPUD2-206ENST00000438224 LRP6O75581 1613 aa12.48□□□□□ -0.41
HERPUD2-206ENST00000438224 USP32Q8NFA0 1604 aa12.47□□□□□ -0.41
HERPUD2-206ENST00000438224 JCADQ9P266 1359 aa12.46□□□□□ -0.41
HERPUD2-206ENST00000438224 ORAI2Q96SN7 254 aa12.46□□□□□ -0.41
HERPUD2-206ENST00000438224 SIN3AQ96ST3 1273 aa12.46□□□□□ -0.41
HERPUD2-206ENST00000438224 ZNF219Q9P2Y4 722 aaPredicted RBP12.46□□□□□ -0.41
HERPUD2-206ENST00000438224 ADGRB2O60241 1585 aa12.46□□□□□ -0.42
HERPUD2-206ENST00000438224 IFNLR1Q8IU57 520 aaPredicted RBP12.45□□□□□ -0.42
HERPUD2-206ENST00000438224 RGS17Q9UGC6 210 aaPredicted RBP12.45□□□□□ -0.42
HERPUD2-206ENST00000438224 TRIM26Q12899 539 aaPredicted RBP12.44□□□□□ -0.42
HERPUD2-206ENST00000438224 SIRT1Q96EB6 747 aa12.44□□□□□ -0.42
HERPUD2-206ENST00000438224 SPINK5Q9NQ38 1064 aaPredicted RBP12.44□□□□□ -0.42
HERPUD2-206ENST00000438224 NUTM2FA1L443 756 aa12.43□□□□□ -0.42
HERPUD2-206ENST00000438224 SAFB2Q14151 953 aaKnown RBP eCLIP12.43□□□□□ -0.42
HERPUD2-206ENST00000438224 PRAM1Q96QH2 718 aa12.43□□□□□ -0.42
HERPUD2-206ENST00000438224 TRPM1Q7Z4N2 1603 aa12.43□□□□□ -0.42
HERPUD2-206ENST00000438224 KIF1AQ12756 1690 aa12.42□□□□□ -0.42
HERPUD2-206ENST00000438224 PXDNQ92626 1479 aa12.42□□□□□ -0.42
HERPUD2-206ENST00000438224 TRAK1Q9UPV9 953 aa12.42□□□□□ -0.42
HERPUD2-206ENST00000438224 CAPN15O75808 1086 aa12.41□□□□□ -0.42
HERPUD2-206ENST00000438224 L3MBTL2Q969R5 705 aa12.41□□□□□ -0.42
HERPUD2-206ENST00000438224 STAC3Q96MF2 364 aa12.41□□□□□ -0.42
HERPUD2-206ENST00000438224 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.41□□□□□ -0.42
HERPUD2-206ENST00000438224 PNPLA6Q8IY17 1366 aa12.41□□□□□ -0.42
HERPUD2-206ENST00000438224 SOS2Q07890 1332 aaPredicted RBP12.4□□□□□ -0.42
HERPUD2-206ENST00000438224 NBPF1Q3BBV0 1214 aa12.4□□□□□ -0.42
HERPUD2-206ENST00000438224 COL22A1Q8NFW1 1626 aaPredicted RBP12.4□□□□□ -0.42
HERPUD2-206ENST00000438224 SPATA31A6Q5VVP1 1343 aa12.38□□□□□ -0.43
HERPUD2-206ENST00000438224 MARF1Q9Y4F3 1742 aaKnown RBP12.38□□□□□ -0.43
HERPUD2-206ENST00000438224 DSG3P32926 999 aa12.38□□□□□ -0.43
HERPUD2-206ENST00000438224 NEUROD1Q13562 356 aa12.38□□□□□ -0.43
HERPUD2-206ENST00000438224 ESCO1Q5FWF5 840 aa12.38□□□□□ -0.43
HERPUD2-206ENST00000438224 HIRIP3Q9BW71 556 aaPredicted RBP12.38□□□□□ -0.43
HERPUD2-206ENST00000438224 QRICH2Q9H0J4 1663 aa12.38□□□□□ -0.43
HERPUD2-206ENST00000438224 MINK1Q8N4C8 1332 aaPredicted RBP12.37□□□□□ -0.43
HERPUD2-206ENST00000438224 PRR36Q9H6K5 1346 aa12.37□□□□□ -0.43
HERPUD2-206ENST00000438224 TRPM3Q9HCF6 1732 aaPredicted RBP12.37□□□□□ -0.43
HERPUD2-206ENST00000438224 XPCQ01831 940 aaPredicted RBP12.37□□□□□ -0.43
HERPUD2-206ENST00000438224 POTEAQ6S8J7 498 aa12.37□□□□□ -0.43
HERPUD2-206ENST00000438224 BBXQ8WY36 941 aaPredicted RBP12.37□□□□□ -0.43
HERPUD2-206ENST00000438224 POGKQ9P215 609 aa12.37□□□□□ -0.43
HERPUD2-206ENST00000438224 ITSN1Q15811 1721 aa12.37□□□□□ -0.43
HERPUD2-206ENST00000438224 TULP4Q9NRJ4 1543 aa12.37□□□□□ -0.43
HERPUD2-206ENST00000438224 TOPAZ1Q8N9V7 1692 aa12.36□□□□□ -0.43
HERPUD2-206ENST00000438224 FOXO3O43524 673 aa12.36□□□□□ -0.43
HERPUD2-206ENST00000438224 LRRC59Q96AG4 307 aaKnown RBP12.36□□□□□ -0.43
HERPUD2-206ENST00000438224 ABCA3Q99758 1704 aa12.36□□□□□ -0.43
HERPUD2-206ENST00000438224 ANKARQ7Z5J8 1434 aa12.36□□□□□ -0.43
HERPUD2-206ENST00000438224 ATP7BP35670 1465 aa12.35□□□□□ -0.43
HERPUD2-206ENST00000438224 NPHP3Q7Z494 1330 aa12.35□□□□□ -0.43
HERPUD2-206ENST00000438224 NUTM2BA6NNL0 878 aaPredicted RBP12.34□□□□□ -0.43
HERPUD2-206ENST00000438224 NUTM2EB1AL46 878 aaPredicted RBP12.34□□□□□ -0.43
HERPUD2-206ENST00000438224 NBPF8Q3BBV2 869 aa12.34□□□□□ -0.43
HERPUD2-206ENST00000438224 NUTM2AQ8IVF1 878 aaPredicted RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms