RNA–Protein interactions for RNA: ENST00000438097.6

UBE3A-204, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS P3 TSL 5 BASIC

Gene UBE3A, Length 8,939 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-204ENST00000438097 FAM161AQ3B820 660 aa16.84■□□□□ 0.29
UBE3A-204ENST00000438097 INTS3Q68E01 1043 aaKnown RBP16.84■□□□□ 0.29
UBE3A-204ENST00000438097 RBM19Q9Y4C8 960 aaKnown RBP16.84■□□□□ 0.29
UBE3A-204ENST00000438097 HIP1O00291 1037 aa16.83■□□□□ 0.28
UBE3A-204ENST00000438097 WIZO95785 1651 aa16.83■□□□□ 0.28
UBE3A-204ENST00000438097 ATF3P18847 181 aa16.83■□□□□ 0.28
UBE3A-204ENST00000438097 NUCB2P80303 420 aa16.82■□□□□ 0.28
UBE3A-204ENST00000438097 TBC1D2BQ9UPU7 963 aa16.82■□□□□ 0.28
UBE3A-204ENST00000438097 GBP2P32456 591 aaPredicted RBP16.81■□□□□ 0.28
UBE3A-204ENST00000438097 TOP2AP11388 1531 aaKnown RBP16.81■□□□□ 0.28
UBE3A-204ENST00000438097 H0YHG0 523 aa16.81■□□□□ 0.28
UBE3A-204ENST00000438097 KIF6Q6ZMV9 814 aa16.81■□□□□ 0.28
UBE3A-204ENST00000438097 RABEP1Q15276 862 aa16.81■□□□□ 0.28
UBE3A-204ENST00000438097 PDCP20941 246 aa16.81■□□□□ 0.28
UBE3A-204ENST00000438097 GNL3LQ9NVN8 582 aaKnown RBP16.81■□□□□ 0.28
UBE3A-204ENST00000438097 SMC3Q9UQE7 1217 aa16.8■□□□□ 0.28
UBE3A-204ENST00000438097 PHF23Q9BUL5 403 aaPredicted RBP16.8■□□□□ 0.28
UBE3A-204ENST00000438097 IQCEQ6IPM2 695 aa16.8■□□□□ 0.28
UBE3A-204ENST00000438097 STIM1Q13586 685 aa16.8■□□□□ 0.28
UBE3A-204ENST00000438097 INCENPQ9NQS7 918 aa16.8■□□□□ 0.28
UBE3A-204ENST00000438097 FILIP1LQ4L180 1135 aa16.79■□□□□ 0.28
UBE3A-204ENST00000438097 API5Q9BZZ5 524 aaKnown RBP16.79■□□□□ 0.28
UBE3A-204ENST00000438097 FOXD4L5Q5VV16 416 aaPredicted RBP16.79■□□□□ 0.28
UBE3A-204ENST00000438097 FOXD4L4Q8WXT5 416 aaPredicted RBP16.79■□□□□ 0.28
UBE3A-204ENST00000438097 FEZ1Q99689 392 aa16.79■□□□□ 0.28
UBE3A-204ENST00000438097 RAB3GAP2Q9H2M9 1393 aa16.79■□□□□ 0.28
UBE3A-204ENST00000438097 SF3B2Q13435 895 aaKnown RBP16.78■□□□□ 0.28
UBE3A-204ENST00000438097 FOXD4L1Q9NU39 408 aa16.78■□□□□ 0.28
UBE3A-204ENST00000438097 ZNHIT6Q9NWK9 470 aaKnown RBP16.78■□□□□ 0.28
UBE3A-204ENST00000438097 SUPT6HQ7KZ85 1726 aaKnown RBP16.77■□□□□ 0.28
UBE3A-204ENST00000438097 CFAP65Q6ZU64 1925 aaKnown RBP16.77■□□□□ 0.27
UBE3A-204ENST00000438097 CCDC146Q8IYE0 955 aa16.77■□□□□ 0.27
UBE3A-204ENST00000438097 CLUAP1Q96AJ1 413 aa16.77■□□□□ 0.27
UBE3A-204ENST00000438097 CCDC27Q2M243 656 aa16.76■□□□□ 0.27
UBE3A-204ENST00000438097 JMYQ8N9B5 988 aa16.76■□□□□ 0.27
UBE3A-204ENST00000438097 RRBP1Q9P2E9 1410 aaKnown RBP16.76■□□□□ 0.27
UBE3A-204ENST00000438097 RAPGEF2Q9Y4G8 1499 aa16.76■□□□□ 0.27
UBE3A-204ENST00000438097 KLHL34Q8N239 644 aa16.76■□□□□ 0.27
UBE3A-204ENST00000438097 IFT57Q9NWB7 429 aa16.76■□□□□ 0.27
UBE3A-204ENST00000438097 CNTROBQ8N137 903 aa16.75■□□□□ 0.27
UBE3A-204ENST00000438097 RAPGEF4Q8WZA2 1011 aa16.75■□□□□ 0.27
UBE3A-204ENST00000438097 NEFHP12036 1026 aa16.75■□□□□ 0.27
UBE3A-204ENST00000438097 KINO60870 393 aaKnown RBP16.74■□□□□ 0.27
UBE3A-204ENST00000438097 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.73■□□□□ 0.27
UBE3A-204ENST00000438097 KRT18P05783 430 aaKnown RBP16.73■□□□□ 0.27
UBE3A-204ENST00000438097 WDHD1O75717 1129 aaPredicted RBP16.72■□□□□ 0.27
UBE3A-204ENST00000438097 DACH1Q9UI36 760 aa16.72■□□□□ 0.27
UBE3A-204ENST00000438097 EIF2S2P20042 333 aaKnown RBP16.72■□□□□ 0.27
UBE3A-204ENST00000438097 MCM2P49736 904 aa16.72■□□□□ 0.27
UBE3A-204ENST00000438097 FKBP5Q13451 457 aaPredicted RBP16.71■□□□□ 0.27
UBE3A-204ENST00000438097 ERC1Q8IUD2 1116 aa16.71■□□□□ 0.27
UBE3A-204ENST00000438097 ZNF396Q96N95 335 aaPredicted RBP16.71■□□□□ 0.27
UBE3A-204ENST00000438097 CCDC66A2RUB6 948 aa16.71■□□□□ 0.27
UBE3A-204ENST00000438097 ENOX2Q16206 610 aaKnown RBP16.71■□□□□ 0.27
UBE3A-204ENST00000438097 VPS37CA5D8V6 355 aaPredicted RBP16.71■□□□□ 0.27
UBE3A-204ENST00000438097 GPRASP1Q5JY77 1395 aa16.71■□□□□ 0.27
UBE3A-204ENST00000438097 RIC3Q7Z5B4 369 aa16.71■□□□□ 0.27
UBE3A-204ENST00000438097 STAC3Q96MF2 364 aa16.71■□□□□ 0.27
UBE3A-204ENST00000438097 LEKR1Q6ZMV7 388 aa16.71■□□□□ 0.26
UBE3A-204ENST00000438097 CCDC39Q9UFE4 941 aa16.7■□□□□ 0.26
UBE3A-204ENST00000438097 SDF4Q9BRK5 362 aa16.69■□□□□ 0.26
UBE3A-204ENST00000438097 SAMD1Q6SPF0 538 aaPredicted RBP16.69■□□□□ 0.26
UBE3A-204ENST00000438097 GNAI1P63096 354 aa16.69■□□□□ 0.26
UBE3A-204ENST00000438097 SMARCA4P51532 1647 aa16.69■□□□□ 0.26
UBE3A-204ENST00000438097 DIAPH1O60610 1272 aaKnown RBP16.69■□□□□ 0.26
UBE3A-204ENST00000438097 GSE1Q14687 1217 aa16.69■□□□□ 0.26
UBE3A-204ENST00000438097 MYO15BQ96JP2 1530 aa16.68■□□□□ 0.26
UBE3A-204ENST00000438097 WASHC4Q2M389 1173 aa16.68■□□□□ 0.26
UBE3A-204ENST00000438097 PDILTQ8N807 584 aa16.68■□□□□ 0.26
UBE3A-204ENST00000438097 POTEJP0CG39 1038 aa16.68■□□□□ 0.26
UBE3A-204ENST00000438097 ZBED9Q6R2W3 1325 aa16.68■□□□□ 0.26
UBE3A-204ENST00000438097 NEBLO76041 1014 aa16.68■□□□□ 0.26
UBE3A-204ENST00000438097 FOXD4L6Q3SYB3 417 aaPredicted RBP16.67■□□□□ 0.26
UBE3A-204ENST00000438097 FOXD4L3Q6VB84 417 aaPredicted RBP16.67■□□□□ 0.26
UBE3A-204ENST00000438097 TRAK1Q9UPV9 953 aa16.67■□□□□ 0.26
UBE3A-204ENST00000438097 FYCO1Q9BQS8 1478 aa16.67■□□□□ 0.26
UBE3A-204ENST00000438097 KIAA0754O94854 1291 aa16.67■□□□□ 0.26
UBE3A-204ENST00000438097 USP47Q96K76 1375 aa16.67■□□□□ 0.26
UBE3A-204ENST00000438097 ANKRD1Q15327 319 aa16.66■□□□□ 0.26
UBE3A-204ENST00000438097 DHX57Q6P158 1386 aaKnown RBP16.66■□□□□ 0.26
UBE3A-204ENST00000438097 PDIA4P13667 645 aaKnown RBP16.66■□□□□ 0.26
UBE3A-204ENST00000438097 CCDC91Q7Z6B0 441 aa16.66■□□□□ 0.26
UBE3A-204ENST00000438097 CCDC97Q96F63 343 aaPredicted RBP16.66■□□□□ 0.26
UBE3A-204ENST00000438097 DEF6Q9H4E7 631 aa16.66■□□□□ 0.26
UBE3A-204ENST00000438097 TRIM22Q8IYM9 498 aa16.66■□□□□ 0.26
UBE3A-204ENST00000438097 NACAP1Q9BZK3 213 aa16.66■□□□□ 0.26
UBE3A-204ENST00000438097 KIF21BO75037 1637 aa16.65■□□□□ 0.26
UBE3A-204ENST00000438097 NUTM2FA1L443 756 aa16.65■□□□□ 0.26
UBE3A-204ENST00000438097 DZIP1LQ8IYY4 767 aaKnown RBP16.65■□□□□ 0.26
UBE3A-204ENST00000438097 FYB1O15117 783 aa16.65■□□□□ 0.26
UBE3A-204ENST00000438097 PDCL3Q9H2J4 239 aa16.65■□□□□ 0.26
UBE3A-204ENST00000438097 UBTFL1P0CB47 393 aaPredicted RBP16.65■□□□□ 0.26
UBE3A-204ENST00000438097 CT47B1P0C2W7 299 aaPredicted RBP16.65■□□□□ 0.26
UBE3A-204ENST00000438097 TSPYL4Q9UJ04 414 aa16.64■□□□□ 0.26
UBE3A-204ENST00000438097 ARHGAP5Q13017 1502 aa16.64■□□□□ 0.25
UBE3A-204ENST00000438097 SETD1BQ9UPS6 1966 aaKnown RBP16.64■□□□□ 0.25
UBE3A-204ENST00000438097 CCDC7Q96M83 1385 aa16.64■□□□□ 0.25
UBE3A-204ENST00000438097 CDKL5O76039 1030 aa16.64■□□□□ 0.25
UBE3A-204ENST00000438097 HNRNPMP52272 730 aaKnown RBP eCLIP16.64■□□□□ 0.255e-8■■■■□ 26.4
UBE3A-204ENST00000438097 PPP1R12BO60237 982 aaPredicted RBP16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms