RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 BRD4O60885 1362 aaPredicted RBP19.31■□□□□ 0.68
PTPN13-204ENST00000436978 ANO8Q9HCE9 1232 aaPredicted RBP19.31■□□□□ 0.68
PTPN13-204ENST00000436978 COG6Q9Y2V7 657 aa19.31■□□□□ 0.68
PTPN13-204ENST00000436978 BECN2A8MW95 431 aa19.3■□□□□ 0.68
PTPN13-204ENST00000436978 RIC3Q7Z5B4 369 aa19.3■□□□□ 0.68
PTPN13-204ENST00000436978 POGZQ7Z3K3 1410 aa19.3■□□□□ 0.68
PTPN13-204ENST00000436978 FOXD4L5Q5VV16 416 aaPredicted RBP19.29■□□□□ 0.68
PTPN13-204ENST00000436978 FOXD4L4Q8WXT5 416 aaPredicted RBP19.29■□□□□ 0.68
PTPN13-204ENST00000436978 NFXL1Q6ZNB6 911 aa19.29■□□□□ 0.68
PTPN13-204ENST00000436978 FBXW7Q969H0 707 aa19.29■□□□□ 0.68
PTPN13-204ENST00000436978 NECTIN2Q92692 538 aa19.28■□□□□ 0.68
PTPN13-204ENST00000436978 PLIN1O60240 522 aa19.28■□□□□ 0.68
PTPN13-204ENST00000436978 GAS2L2Q8NHY3 880 aa19.28■□□□□ 0.68
PTPN13-204ENST00000436978 RAD21O60216 631 aa19.28■□□□□ 0.68
PTPN13-204ENST00000436978 PDE4AP27815 886 aa19.27■□□□□ 0.68
PTPN13-204ENST00000436978 KIF6Q6ZMV9 814 aa19.27■□□□□ 0.68
PTPN13-204ENST00000436978 ZNF644Q9H582 1327 aaPredicted RBP19.27■□□□□ 0.68
PTPN13-204ENST00000436978 DDX49Q9Y6V7 483 aaKnown RBP19.26■□□□□ 0.67
PTPN13-204ENST00000436978 DHX16O60231 1041 aaKnown RBP19.25■□□□□ 0.67
PTPN13-204ENST00000436978 EPRSP07814 1512 aaKnown RBP19.25■□□□□ 0.67
PTPN13-204ENST00000436978 KIF7Q2M1P5 1343 aa19.25■□□□□ 0.67
PTPN13-204ENST00000436978 CCDC30Q5VVM6 783 aa19.25■□□□□ 0.67
PTPN13-204ENST00000436978 CABP2Q9NPB3 220 aa19.25■□□□□ 0.67
PTPN13-204ENST00000436978 SAFBQ15424 915 aaKnown RBP eCLIP19.24■□□□□ 0.67
PTPN13-204ENST00000436978 BRMS1Q9HCU9 246 aa19.24■□□□□ 0.67
PTPN13-204ENST00000436978 PTPN23Q9H3S7 1636 aa19.24■□□□□ 0.67
PTPN13-204ENST00000436978 KIAA1107Q9UPP5 1409 aa19.24■□□□□ 0.67
PTPN13-204ENST00000436978 HMOX1P09601 288 aa19.24■□□□□ 0.67
PTPN13-204ENST00000436978 ABTB2Q8N961 1025 aa19.24■□□□□ 0.67
PTPN13-204ENST00000436978 CCDC43Q96MW1 224 aaKnown RBP19.24■□□□□ 0.67
PTPN13-204ENST00000436978 NLRP2Q9NX02 1062 aa19.24■□□□□ 0.67
PTPN13-204ENST00000436978 EXOC6Q8TAG9 804 aa19.24■□□□□ 0.67
PTPN13-204ENST00000436978 UBTFL1P0CB47 393 aaPredicted RBP19.23■□□□□ 0.67
PTPN13-204ENST00000436978 CWC22Q9HCG8 908 aaKnown RBP19.23■□□□□ 0.67
PTPN13-204ENST00000436978 IPO7O95373 1038 aaKnown RBP19.23■□□□□ 0.67
PTPN13-204ENST00000436978 TROQ12816 1431 aaPredicted RBP19.23■□□□□ 0.67
PTPN13-204ENST00000436978 POLA1P09884 1462 aaPredicted RBP19.23■□□□□ 0.67
PTPN13-204ENST00000436978 ARAP1Q96P48 1450 aa19.23■□□□□ 0.67
PTPN13-204ENST00000436978 NESP48681 1621 aa19.22■□□□□ 0.67
PTPN13-204ENST00000436978 PLEKHO1Q53GL0 409 aaPredicted RBP19.22■□□□□ 0.67
PTPN13-204ENST00000436978 RALYLQ86SE5 291 aaKnown RBP19.22■□□□□ 0.67
PTPN13-204ENST00000436978 NLRP6P59044 892 aa19.22■□□□□ 0.67
PTPN13-204ENST00000436978 CNTROBQ8N137 903 aa19.21■□□□□ 0.67
PTPN13-204ENST00000436978 THEMISQ8N1K5 641 aaPredicted RBP19.21■□□□□ 0.67
PTPN13-204ENST00000436978 FAM135AQ9P2D6 1515 aa19.21■□□□□ 0.67
PTPN13-204ENST00000436978 ITSN2Q9NZM3 1697 aa19.21■□□□□ 0.67
PTPN13-204ENST00000436978 XBP1P17861 261 aa19.21■□□□□ 0.67
PTPN13-204ENST00000436978 PSMA5P28066 241 aa19.21■□□□□ 0.67
PTPN13-204ENST00000436978 CCDC141Q6ZP82 1450 aa19.21■□□□□ 0.67
PTPN13-204ENST00000436978 HIP1O00291 1037 aa19.2■□□□□ 0.66
PTPN13-204ENST00000436978 PCMTD1Q96MG8 357 aaPredicted RBP19.2■□□□□ 0.66
PTPN13-204ENST00000436978 PDE4CQ08493 712 aa19.19■□□□□ 0.66
PTPN13-204ENST00000436978 SMC3Q9UQE7 1217 aa19.19■□□□□ 0.66
PTPN13-204ENST00000436978 PCF11O94913 1555 aaKnown RBP19.18■□□□□ 0.66
PTPN13-204ENST00000436978 NUCB2P80303 420 aa19.18■□□□□ 0.66
PTPN13-204ENST00000436978 ESCO1Q5FWF5 840 aa19.18■□□□□ 0.66
PTPN13-204ENST00000436978 GPS2Q13227 327 aa19.18■□□□□ 0.66
PTPN13-204ENST00000436978 TXNDC2Q86VQ3 553 aa19.18■□□□□ 0.66
PTPN13-204ENST00000436978 TSHZ2Q9NRE2 1034 aa19.18■□□□□ 0.66
PTPN13-204ENST00000436978 ERC1Q8IUD2 1116 aa19.18■□□□□ 0.66
PTPN13-204ENST00000436978 CTTNBP2Q8WZ74 1663 aa19.17■□□□□ 0.66
PTPN13-204ENST00000436978 SLC3A2P08195 630 aaKnown RBP19.17■□□□□ 0.66
PTPN13-204ENST00000436978 TBC1D2BQ9UPU7 963 aa19.17■□□□□ 0.66
PTPN13-204ENST00000436978 DAPK1P53355 1430 aa19.17■□□□□ 0.66
PTPN13-204ENST00000436978 GNAI3P08754 354 aa19.17■□□□□ 0.66
PTPN13-204ENST00000436978 ZNF692Q9BU19 519 aaPredicted RBP19.17■□□□□ 0.66
PTPN13-204ENST00000436978 SLC52A1Q9NWF4 448 aa19.16■□□□□ 0.66
PTPN13-204ENST00000436978 KAT6BQ8WYB5 2073 aa19.16■□□□□ 0.66
PTPN13-204ENST00000436978 BICD2Q8TD16 824 aa19.16■□□□□ 0.66
PTPN13-204ENST00000436978 GGNBP2Q9H3C7 697 aa19.16■□□□□ 0.66
PTPN13-204ENST00000436978 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.16■□□□□ 0.66
PTPN13-204ENST00000436978 SART3Q15020 963 aaKnown RBP19.16■□□□□ 0.66
PTPN13-204ENST00000436978 AIMP1Q12904 312 aaKnown RBP19.16■□□□□ 0.66
PTPN13-204ENST00000436978 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.16■□□□□ 0.66
PTPN13-204ENST00000436978 NEUROD6Q96NK8 337 aa19.15■□□□□ 0.66
PTPN13-204ENST00000436978 ERBINQ96RT1 1412 aa19.15■□□□□ 0.66
PTPN13-204ENST00000436978 DCAF8L1A6NGE4 600 aa19.15■□□□□ 0.66
PTPN13-204ENST00000436978 HMGB2P26583 209 aaKnown RBP19.15■□□□□ 0.66
PTPN13-204ENST00000436978 CCDC27Q2M243 656 aa19.15■□□□□ 0.66
PTPN13-204ENST00000436978 CDC45O75419 566 aa19.14■□□□□ 0.65
PTPN13-204ENST00000436978 TMEM132EQ6IEE7 984 aa19.14■□□□□ 0.65
PTPN13-204ENST00000436978 RPGRIP1LQ68CZ1 1315 aa19.14■□□□□ 0.65
PTPN13-204ENST00000436978 WASHC4Q2M389 1173 aa19.13■□□□□ 0.65
PTPN13-204ENST00000436978 NUTM2GQ5VZR2 741 aa19.13■□□□□ 0.65
PTPN13-204ENST00000436978 NAT10Q9H0A0 1025 aaKnown RBP19.13■□□□□ 0.65
PTPN13-204ENST00000436978 SASS6Q6UVJ0 657 aa19.13■□□□□ 0.65
PTPN13-204ENST00000436978 TATP17735 454 aaPredicted RBP19.13■□□□□ 0.65
PTPN13-204ENST00000436978 FOXD4L6Q3SYB3 417 aaPredicted RBP19.13■□□□□ 0.65
PTPN13-204ENST00000436978 FOXD4L3Q6VB84 417 aaPredicted RBP19.13■□□□□ 0.65
PTPN13-204ENST00000436978 PNISRQ8TF01 805 aaKnown RBP19.13■□□□□ 0.65
PTPN13-204ENST00000436978 PRAM1Q96QH2 718 aa19.13■□□□□ 0.65
PTPN13-204ENST00000436978 MTHFSP49914 203 aa19.12■□□□□ 0.65
PTPN13-204ENST00000436978 PROSER2Q86WR7 435 aaPredicted RBP19.12■□□□□ 0.65
PTPN13-204ENST00000436978 AFAP1Q8N556 730 aa19.12■□□□□ 0.65
PTPN13-204ENST00000436978 CHMP5Q9NZZ3 219 aa19.12■□□□□ 0.65
PTPN13-204ENST00000436978 CCDC73Q6ZRK6 1079 aa19.11■□□□□ 0.65
PTPN13-204ENST00000436978 GNL3LQ9NVN8 582 aaKnown RBP19.11■□□□□ 0.65
PTPN13-204ENST00000436978 RTEL1-TNFRSF6BF6WH68 1400 aa19.11■□□□□ 0.65
PTPN13-204ENST00000436978 CLASRPQ8N2M8 674 aaKnown RBP19.1■□□□□ 0.65
PTPN13-204ENST00000436978 ANKRD30BQ9BXX2 1392 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms