RNA–Protein interactions for RNA: ENST00000434795.5

CPNE1-213, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-213ENST00000434795 NUTM2AQ8IVF1 878 aaPredicted RBP26.25■■□□□ 1.79
CPNE1-213ENST00000434795 LRP6O75581 1613 aa26.25■■□□□ 1.79
CPNE1-213ENST00000434795 YTHDC2Q9H6S0 1430 aaKnown RBP26.24■■□□□ 1.79
CPNE1-213ENST00000434795 PLEKHH1Q9ULM0 1364 aa26.24■■□□□ 1.79
CPNE1-213ENST00000434795 SOS2Q07890 1332 aaPredicted RBP26.23■■□□□ 1.79
CPNE1-213ENST00000434795 MEX3CQ5U5Q3 659 aaKnown RBP26.23■■□□□ 1.79
CPNE1-213ENST00000434795 ESCO1Q5FWF5 840 aa26.22■■□□□ 1.79
CPNE1-213ENST00000434795 KDM2AQ9Y2K7 1162 aa26.22■■□□□ 1.79
CPNE1-213ENST00000434795 DHX57Q6P158 1386 aaKnown RBP26.21■■□□□ 1.79
CPNE1-213ENST00000434795 DCAF11Q8TEB1 546 aa26.21■■□□□ 1.79
CPNE1-213ENST00000434795 MYOM2P54296 1465 aa26.21■■□□□ 1.79
CPNE1-213ENST00000434795 NHSL1Q5SYE7 1610 aa26.21■■□□□ 1.79
CPNE1-213ENST00000434795 STAC3Q96MF2 364 aa26.2■■□□□ 1.78
CPNE1-213ENST00000434795 SHPRHQ149N8 1683 aa26.19■■□□□ 1.78
CPNE1-213ENST00000434795 NUTM2FA1L443 756 aa26.18■■□□□ 1.78
CPNE1-213ENST00000434795 ZNF772Q68DY9 489 aaPredicted RBP26.18■■□□□ 1.78
CPNE1-213ENST00000434795 PNPLA6Q8IY17 1366 aa26.18■■□□□ 1.78
CPNE1-213ENST00000434795 FOXO3O43524 673 aa26.16■■□□□ 1.78
CPNE1-213ENST00000434795 PRAM1Q96QH2 718 aa26.14■■□□□ 1.78
CPNE1-213ENST00000434795 LAMC1P11047 1609 aa26.13■■□□□ 1.77
CPNE1-213ENST00000434795 CDC42BPGQ6DT37 1551 aa26.12■■□□□ 1.77
CPNE1-213ENST00000434795 NPHP3Q7Z494 1330 aa26.12■■□□□ 1.77
CPNE1-213ENST00000434795 SAFB2Q14151 953 aaKnown RBP eCLIP26.1■■□□□ 1.773e-13■□□□□ 9.1
CPNE1-213ENST00000434795 POGKQ9P215 609 aa26.1■■□□□ 1.77
CPNE1-213ENST00000434795 TRAK1Q9UPV9 953 aa26.09■■□□□ 1.77
CPNE1-213ENST00000434795 AFF2P51816 1311 aa26.09■■□□□ 1.77
CPNE1-213ENST00000434795 KNDC1Q76NI1 1749 aa26.08■■□□□ 1.77
CPNE1-213ENST00000434795 XPCQ01831 940 aaPredicted RBP26.08■■□□□ 1.77
CPNE1-213ENST00000434795 ADAMTS2O95450 1211 aa26.07■■□□□ 1.76
CPNE1-213ENST00000434795 C8orf37Q96NL8 207 aa26.07■■□□□ 1.76
CPNE1-213ENST00000434795 RXRBP28702 533 aa26.06■■□□□ 1.76
CPNE1-213ENST00000434795 ADGRB1O14514 1584 aa26.04■■□□□ 1.76
CPNE1-213ENST00000434795 NGLY1Q96IV0 654 aa26.04■■□□□ 1.76
CPNE1-213ENST00000434795 KRT28Q7Z3Y7 464 aa26.03■■□□□ 1.76
CPNE1-213ENST00000434795 QTRT2Q9H974 415 aaKnown RBP26.03■■□□□ 1.76
CPNE1-213ENST00000434795 PXDNQ92626 1479 aa26.03■■□□□ 1.76
CPNE1-213ENST00000434795 PHF8Q9UPP1 1060 aa26.02■■□□□ 1.76
CPNE1-213ENST00000434795 DLC1Q96QB1 1528 aa26.02■■□□□ 1.76
CPNE1-213ENST00000434795 HIRIP3Q9BW71 556 aaPredicted RBP25.99■■□□□ 1.75
CPNE1-213ENST00000434795 SPATA31A3Q5VYP0 1347 aa25.98■■□□□ 1.75
CPNE1-213ENST00000434795 FNBP4Q8N3X1 1017 aaPredicted RBP25.98■■□□□ 1.75
CPNE1-213ENST00000434795 FMN2Q9NZ56 1722 aa25.97■■□□□ 1.75
CPNE1-213ENST00000434795 MINK1Q8N4C8 1332 aaPredicted RBP25.97■■□□□ 1.75
CPNE1-213ENST00000434795 PSME1Q06323 249 aa25.96■■□□□ 1.75
CPNE1-213ENST00000434795 WASLO00401 505 aaPredicted RBP25.94■■□□□ 1.74
CPNE1-213ENST00000434795 RBM6P78332 1123 aaKnown RBP25.94■■□□□ 1.74
CPNE1-213ENST00000434795 USP21Q9UK80 565 aa25.94■■□□□ 1.74
CPNE1-213ENST00000434795 PMFBP1Q8TBY8 1022 aa25.93■■□□□ 1.74
CPNE1-213ENST00000434795 NBPF1Q3BBV0 1214 aa25.92■■□□□ 1.74
CPNE1-213ENST00000434795 COL22A1Q8NFW1 1626 aaPredicted RBP25.91■■□□□ 1.74
CPNE1-213ENST00000434795 PRR36Q9H6K5 1346 aa25.9■■□□□ 1.74
CPNE1-213ENST00000434795 ANKARQ7Z5J8 1434 aa25.9■■□□□ 1.74
CPNE1-213ENST00000434795 SIN3AQ96ST3 1273 aa25.89■■□□□ 1.74
CPNE1-213ENST00000434795 CDK12Q9NYV4 1490 aaPredicted RBP25.88■■□□□ 1.73
CPNE1-213ENST00000434795 L3MBTL2Q969R5 705 aa25.88■■□□□ 1.73
CPNE1-213ENST00000434795 TRPC5Q9UL62 973 aaPredicted RBP25.88■■□□□ 1.73
CPNE1-213ENST00000434795 RGPD8O14715 1765 aaPredicted RBP25.87■■□□□ 1.73
CPNE1-213ENST00000434795 SBNO1A3KN83 1393 aa25.87■■□□□ 1.73
CPNE1-213ENST00000434795 UPF1Q92900 1129 aaKnown RBP eCLIP25.86■■□□□ 1.73
CPNE1-213ENST00000434795 KIF1AQ12756 1690 aa25.86■■□□□ 1.73
CPNE1-213ENST00000434795 CABLES1Q8TDN4 633 aa25.85■■□□□ 1.73
CPNE1-213ENST00000434795 ADGRB2O60241 1585 aa25.84■■□□□ 1.73
CPNE1-213ENST00000434795 NUDT16Q96DE0 195 aaKnown RBP25.83■■□□□ 1.73
CPNE1-213ENST00000434795 CDK19Q9BWU1 502 aa25.83■■□□□ 1.73
CPNE1-213ENST00000434795 BCL9LQ86UU0 1499 aa25.83■■□□□ 1.73
CPNE1-213ENST00000434795 EIF3AQ14152 1382 aaKnown RBP25.82■■□□□ 1.72
CPNE1-213ENST00000434795 USP32Q8NFA0 1604 aa25.82■■□□□ 1.72
CPNE1-213ENST00000434795 LMOD2Q6P5Q4 547 aa25.82■■□□□ 1.72
CPNE1-213ENST00000434795 TNS3Q68CZ2 1445 aa25.81■■□□□ 1.72
CPNE1-213ENST00000434795 NEUROD1Q13562 356 aa25.81■■□□□ 1.72
CPNE1-213ENST00000434795 ATRNO75882 1429 aa25.8■■□□□ 1.72
CPNE1-213ENST00000434795 NGDNQ8NEJ9 315 aaKnown RBP25.79■■□□□ 1.72
CPNE1-213ENST00000434795 UNC5CLQ8IV45 518 aa25.78■■□□□ 1.72
CPNE1-213ENST00000434795 ARHGEF10O15013 1369 aa25.78■■□□□ 1.72
CPNE1-213ENST00000434795 GPRASP1Q5JY77 1395 aa25.78■■□□□ 1.72
CPNE1-213ENST00000434795 TULP4Q9NRJ4 1543 aa25.78■■□□□ 1.72
CPNE1-213ENST00000434795 PLEKHG5O94827 1062 aa25.77■■□□□ 1.72
CPNE1-213ENST00000434795 RGS12O14924 1447 aa25.77■■□□□ 1.72
CPNE1-213ENST00000434795 GJD4Q96KN9 370 aaPredicted RBP25.76■■□□□ 1.71
CPNE1-213ENST00000434795 KIAA1210Q9ULL0 1709 aa25.75■■□□□ 1.71
CPNE1-213ENST00000434795 HAP1P54257 671 aaPredicted RBP25.75■■□□□ 1.71
CPNE1-213ENST00000434795 FAM83GA6ND36 823 aa25.74■■□□□ 1.71
CPNE1-213ENST00000434795 CCDC61Q9Y6R9 512 aa25.74■■□□□ 1.71
CPNE1-213ENST00000434795 PLEKHG3A1L390 1219 aa25.73■■□□□ 1.71
CPNE1-213ENST00000434795 ARHGEF28Q8N1W1 1705 aaKnown RBP25.73■■□□□ 1.71
CPNE1-213ENST00000434795 SLIT2O94813 1529 aa25.73■■□□□ 1.71
CPNE1-213ENST00000434795 NBPF8Q3BBV2 869 aa25.71■■□□□ 1.71
CPNE1-213ENST00000434795 CENPJQ9HC77 1338 aaPredicted RBP25.7■■□□□ 1.71
CPNE1-213ENST00000434795 PAK3O75914 559 aaPredicted RBP25.7■■□□□ 1.7
CPNE1-213ENST00000434795 ATP7BP35670 1465 aa25.69■■□□□ 1.7
CPNE1-213ENST00000434795 MARF1Q9Y4F3 1742 aaKnown RBP25.68■■□□□ 1.7
CPNE1-213ENST00000434795 ACEP12821 1306 aa25.67■■□□□ 1.7
CPNE1-213ENST00000434795 TRIM26Q12899 539 aaPredicted RBP25.66■■□□□ 1.7
CPNE1-213ENST00000434795 VPS72Q15906 364 aa25.66■■□□□ 1.7
CPNE1-213ENST00000434795 POLR3AO14802 1390 aaPredicted RBP25.66■■□□□ 1.7
CPNE1-213ENST00000434795 CABP2Q9NPB3 220 aa25.65■■□□□ 1.7
CPNE1-213ENST00000434795 TRPM3Q9HCF6 1732 aaPredicted RBP25.65■■□□□ 1.7
CPNE1-213ENST00000434795 SRPK2P78362 688 aaKnown RBP25.64■■□□□ 1.7
CPNE1-213ENST00000434795 ONECUT3O60422 494 aaPredicted RBP25.63■■□□□ 1.69
CPNE1-213ENST00000434795 RALGAPBQ86X10 1494 aa25.61■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms