RNA–Protein interactions for RNA: ENST00000434760.5

NUP50-210, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 763 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-210ENST00000434760 PNPLA6Q8IY17 1366 aa23.29■■□□□ 1.32
NUP50-210ENST00000434760 DLC1Q96QB1 1528 aa23.29■■□□□ 1.32
NUP50-210ENST00000434760 POTEAQ6S8J7 498 aa23.29■■□□□ 1.32
NUP50-210ENST00000434760 ADGRB2O60241 1585 aa23.28■■□□□ 1.32
NUP50-210ENST00000434760 DDX17Q92841 729 aaKnown RBP23.28■■□□□ 1.32
NUP50-210ENST00000434760 KIF1AQ12756 1690 aa23.28■■□□□ 1.32
NUP50-210ENST00000434760 RGPD8O14715 1765 aaPredicted RBP23.27■■□□□ 1.32
NUP50-210ENST00000434760 TMEM132EQ6IEE7 984 aa23.27■■□□□ 1.32
NUP50-210ENST00000434760 PXDNQ92626 1479 aa23.26■■□□□ 1.31
NUP50-210ENST00000434760 C14orf93Q9H972 538 aaKnown RBP23.26■■□□□ 1.31
NUP50-210ENST00000434760 ORAI2Q96SN7 254 aa23.25■■□□□ 1.31
NUP50-210ENST00000434760 STK26Q9P289 416 aa23.25■■□□□ 1.31
NUP50-210ENST00000434760 SOS2Q07890 1332 aaPredicted RBP23.24■■□□□ 1.31
NUP50-210ENST00000434760 ARHGEF28Q8N1W1 1705 aaKnown RBP23.23■■□□□ 1.31
NUP50-210ENST00000434760 WAPLQ7Z5K2 1190 aa23.23■■□□□ 1.31
NUP50-210ENST00000434760 USP32Q8NFA0 1604 aa23.22■■□□□ 1.31
NUP50-210ENST00000434760 CFAP70Q5T0N1 1121 aa23.22■■□□□ 1.31
NUP50-210ENST00000434760 DHX57Q6P158 1386 aaKnown RBP23.21■■□□□ 1.31
NUP50-210ENST00000434760 MARF1Q9Y4F3 1742 aaKnown RBP23.21■■□□□ 1.31
NUP50-210ENST00000434760 LRRC59Q96AG4 307 aaKnown RBP23.2■■□□□ 1.3
NUP50-210ENST00000434760 KIAA1210Q9ULL0 1709 aa23.19■■□□□ 1.3
NUP50-210ENST00000434760 SIRT1Q96EB6 747 aa23.18■■□□□ 1.3
NUP50-210ENST00000434760 MEX3CQ5U5Q3 659 aaKnown RBP23.15■■□□□ 1.3
NUP50-210ENST00000434760 ABCA3Q99758 1704 aa23.14■■□□□ 1.3
NUP50-210ENST00000434760 NPHP3Q7Z494 1330 aa23.13■■□□□ 1.29
NUP50-210ENST00000434760 NUTM2BA6NNL0 878 aaPredicted RBP23.13■■□□□ 1.29
NUP50-210ENST00000434760 NUTM2EB1AL46 878 aaPredicted RBP23.13■■□□□ 1.29
NUP50-210ENST00000434760 NUTM2AQ8IVF1 878 aaPredicted RBP23.13■■□□□ 1.29
NUP50-210ENST00000434760 ESCO1Q5FWF5 840 aa23.11■■□□□ 1.29
NUP50-210ENST00000434760 DCAF11Q8TEB1 546 aa23.1■■□□□ 1.29
NUP50-210ENST00000434760 PRAM1Q96QH2 718 aa23.1■■□□□ 1.29
NUP50-210ENST00000434760 CDK12Q9NYV4 1490 aaPredicted RBP23.1■■□□□ 1.29
NUP50-210ENST00000434760 AFF2P51816 1311 aa23.09■■□□□ 1.29
NUP50-210ENST00000434760 ANKARQ7Z5J8 1434 aa23.09■■□□□ 1.29
NUP50-210ENST00000434760 TRPM3Q9HCF6 1732 aaPredicted RBP23.09■■□□□ 1.29
NUP50-210ENST00000434760 NUTM2FA1L443 756 aa23.09■■□□□ 1.29
NUP50-210ENST00000434760 ZNF772Q68DY9 489 aaPredicted RBP23.09■■□□□ 1.29
NUP50-210ENST00000434760 TULP4Q9NRJ4 1543 aa23.08■■□□□ 1.28
NUP50-210ENST00000434760 STAC3Q96MF2 364 aa23.07■■□□□ 1.28
NUP50-210ENST00000434760 ITSN1Q15811 1721 aa23.07■■□□□ 1.28
NUP50-210ENST00000434760 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.07■■□□□ 1.28
NUP50-210ENST00000434760 FOXO3O43524 673 aa23.05■■□□□ 1.28
NUP50-210ENST00000434760 KDM2AQ9Y2K7 1162 aa23.05■■□□□ 1.28
NUP50-210ENST00000434760 TOPAZ1Q8N9V7 1692 aa23.05■■□□□ 1.28
NUP50-210ENST00000434760 XPCQ01831 940 aaPredicted RBP23.04■■□□□ 1.28
NUP50-210ENST00000434760 SAFB2Q14151 953 aaKnown RBP eCLIP23.04■■□□□ 1.28
NUP50-210ENST00000434760 C8orf37Q96NL8 207 aa23.04■■□□□ 1.28
NUP50-210ENST00000434760 ALS2Q96Q42 1657 aa23.03■■□□□ 1.28
NUP50-210ENST00000434760 TNS3Q68CZ2 1445 aa23.03■■□□□ 1.28
NUP50-210ENST00000434760 RGS12O14924 1447 aa23.02■■□□□ 1.28
NUP50-210ENST00000434760 TRAK1Q9UPV9 953 aa23.02■■□□□ 1.28
NUP50-210ENST00000434760 CRYBG1Q9Y4K1 1723 aa23.02■■□□□ 1.28
NUP50-210ENST00000434760 ATP7BP35670 1465 aa23.01■■□□□ 1.27
NUP50-210ENST00000434760 ADAMTS2O95450 1211 aa23■■□□□ 1.27
NUP50-210ENST00000434760 SPATA31A3Q5VYP0 1347 aa23■■□□□ 1.27
NUP50-210ENST00000434760 PLCH1Q4KWH8 1693 aa23■■□□□ 1.27
NUP50-210ENST00000434760 EP400Q96L91 3159 aa22.99■■□□□ 1.27
NUP50-210ENST00000434760 POGKQ9P215 609 aa22.99■■□□□ 1.27
NUP50-210ENST00000434760 TRPM1Q7Z4N2 1603 aa22.98■■□□□ 1.27
NUP50-210ENST00000434760 PHF8Q9UPP1 1060 aa22.98■■□□□ 1.27
NUP50-210ENST00000434760 PRR36Q9H6K5 1346 aa22.98■■□□□ 1.27
NUP50-210ENST00000434760 EIF3AQ14152 1382 aaKnown RBP22.97■■□□□ 1.27
NUP50-210ENST00000434760 ATRNO75882 1429 aa22.97■■□□□ 1.27
NUP50-210ENST00000434760 SBNO1A3KN83 1393 aa22.96■■□□□ 1.27
NUP50-210ENST00000434760 QRICH2Q9H0J4 1663 aa22.96■■□□□ 1.27
NUP50-210ENST00000434760 RXRBP28702 533 aa22.95■■□□□ 1.26
NUP50-210ENST00000434760 BCL9LQ86UU0 1499 aa22.95■■□□□ 1.26
NUP50-210ENST00000434760 MINK1Q8N4C8 1332 aaPredicted RBP22.95■■□□□ 1.26
NUP50-210ENST00000434760 HIRIP3Q9BW71 556 aaPredicted RBP22.95■■□□□ 1.26
NUP50-210ENST00000434760 NWD2Q9ULI1 1742 aa22.95■■□□□ 1.26
NUP50-210ENST00000434760 FNBP4Q8N3X1 1017 aaPredicted RBP22.94■■□□□ 1.26
NUP50-210ENST00000434760 SLIT2O94813 1529 aa22.93■■□□□ 1.26
NUP50-210ENST00000434760 KRT28Q7Z3Y7 464 aa22.92■■□□□ 1.26
NUP50-210ENST00000434760 NGLY1Q96IV0 654 aa22.92■■□□□ 1.26
NUP50-210ENST00000434760 NRAPQ86VF7 1730 aa22.91■■□□□ 1.26
NUP50-210ENST00000434760 GLI3P10071 1580 aa22.9■■□□□ 1.26
NUP50-210ENST00000434760 WASLO00401 505 aaPredicted RBP22.9■■□□□ 1.26
NUP50-210ENST00000434760 ARHGEF10O15013 1369 aa22.89■■□□□ 1.26
NUP50-210ENST00000434760 RBM6P78332 1123 aaKnown RBP22.89■■□□□ 1.25
NUP50-210ENST00000434760 QTRT2Q9H974 415 aaKnown RBP22.89■■□□□ 1.25
NUP50-210ENST00000434760 USP21Q9UK80 565 aa22.88■■□□□ 1.25
NUP50-210ENST00000434760 PHRF1Q9P1Y6 1649 aaKnown RBP22.88■■□□□ 1.25
NUP50-210ENST00000434760 NBPF1Q3BBV0 1214 aa22.87■■□□□ 1.25
NUP50-210ENST00000434760 PMFBP1Q8TBY8 1022 aa22.87■■□□□ 1.25
NUP50-210ENST00000434760 PSME1Q06323 249 aa22.84■■□□□ 1.25
NUP50-210ENST00000434760 TRPC5Q9UL62 973 aaPredicted RBP22.84■■□□□ 1.25
NUP50-210ENST00000434760 L3MBTL2Q969R5 705 aa22.83■■□□□ 1.25
NUP50-210ENST00000434760 COL14A1Q05707 1796 aaKnown RBP22.83■■□□□ 1.24
NUP50-210ENST00000434760 RALGAPBQ86X10 1494 aa22.82■■□□□ 1.24
NUP50-210ENST00000434760 UPF1Q92900 1129 aaKnown RBP eCLIP22.82■■□□□ 1.24
NUP50-210ENST00000434760 BRWD3Q6RI45 1802 aa22.82■■□□□ 1.24
NUP50-210ENST00000434760 POLR3AO14802 1390 aaPredicted RBP22.81■■□□□ 1.24
NUP50-210ENST00000434760 GPRASP1Q5JY77 1395 aa22.81■■□□□ 1.24
NUP50-210ENST00000434760 SIN3AQ96ST3 1273 aa22.81■■□□□ 1.24
NUP50-210ENST00000434760 CABLES1Q8TDN4 633 aa22.8■■□□□ 1.24
NUP50-210ENST00000434760 NRKQ7Z2Y5 1582 aa22.78■■□□□ 1.24
NUP50-210ENST00000434760 NUDT16Q96DE0 195 aaKnown RBP22.78■■□□□ 1.24
NUP50-210ENST00000434760 CENPJQ9HC77 1338 aaPredicted RBP22.77■■□□□ 1.24
NUP50-210ENST00000434760 CDK19Q9BWU1 502 aa22.76■■□□□ 1.23
NUP50-210ENST00000434760 UNC5CLQ8IV45 518 aa22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms