RNA–Protein interactions for RNA: ENST00000431893.3

SEC16A-206, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEC16A, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-206ENST00000431893 OLFM4Q6UX06 510 aa13.81□□□□□ -0.2
SEC16A-206ENST00000431893 ZBED9Q6R2W3 1325 aa13.81□□□□□ -0.2
SEC16A-206ENST00000431893 WASHC4Q2M389 1173 aa13.8□□□□□ -0.2
SEC16A-206ENST00000431893 G3BP1Q13283 466 aaKnown RBP eCLIP13.8□□□□□ -0.22e-6■■■□□ 18.6
SEC16A-206ENST00000431893 PKNOX2Q96KN3 472 aa13.8□□□□□ -0.2
SEC16A-206ENST00000431893 PRKRIP1Q9H875 184 aaPredicted RBP13.8□□□□□ -0.2
SEC16A-206ENST00000431893 ACBD3Q9H3P7 528 aa13.8□□□□□ -0.2
SEC16A-206ENST00000431893 EID1Q9Y6B2 187 aa13.8□□□□□ -0.2
SEC16A-206ENST00000431893 TRIM5Q9C035 493 aa13.8□□□□□ -0.2
SEC16A-206ENST00000431893 RDXP35241 583 aaKnown RBP13.79□□□□□ -0.2
SEC16A-206ENST00000431893 RNF20Q5VTR2 975 aa13.79□□□□□ -0.2
SEC16A-206ENST00000431893 PRPF40AO75400 957 aaKnown RBP13.79□□□□□ -0.2
SEC16A-206ENST00000431893 TSPYL1Q9H0U9 437 aa13.79□□□□□ -0.2
SEC16A-206ENST00000431893 KLHL34Q8N239 644 aa13.78□□□□□ -0.2
SEC16A-206ENST00000431893 TRAK2O60296 914 aa13.78□□□□□ -0.2
SEC16A-206ENST00000431893 CDR1P51861 262 aa13.78□□□□□ -0.2
SEC16A-206ENST00000431893 NUCB2P80303 420 aa13.78□□□□□ -0.2
SEC16A-206ENST00000431893 AXDND1Q5T1B0 1012 aaPredicted RBP13.78□□□□□ -0.2
SEC16A-206ENST00000431893 C1orf115Q9H7X2 142 aa13.77□□□□□ -0.2
SEC16A-206ENST00000431893 OFD1O75665 1012 aa13.77□□□□□ -0.21
SEC16A-206ENST00000431893 FAM177A1Q8N128 213 aaPredicted RBP13.77□□□□□ -0.21
SEC16A-206ENST00000431893 CCDC191Q8NCU4 936 aa13.77□□□□□ -0.21
SEC16A-206ENST00000431893 SDF4Q9BRK5 362 aa13.77□□□□□ -0.21
SEC16A-206ENST00000431893 SAFBQ15424 915 aaKnown RBP eCLIP13.76□□□□□ -0.21
SEC16A-206ENST00000431893 TSPY26PQ9H489 355 aa13.76□□□□□ -0.21
SEC16A-206ENST00000431893 CWC22Q9HCG8 908 aaKnown RBP13.76□□□□□ -0.21
SEC16A-206ENST00000431893 FAM177BA6PVY3 158 aa13.75□□□□□ -0.21
SEC16A-206ENST00000431893 CHMP4CQ96CF2 233 aa13.75□□□□□ -0.21
SEC16A-206ENST00000431893 MAP4K4O95819 1239 aaPredicted RBP13.75□□□□□ -0.21
SEC16A-206ENST00000431893 FAM193AP78312 1265 aa13.75□□□□□ -0.21
SEC16A-206ENST00000431893 NUTM2GQ5VZR2 741 aa13.75□□□□□ -0.21
SEC16A-206ENST00000431893 MRE11P49959 708 aa13.75□□□□□ -0.21
SEC16A-206ENST00000431893 LRRFIP1Q32MZ4 808 aaKnown RBP13.75□□□□□ -0.21
SEC16A-206ENST00000431893 TSPYL4Q9UJ04 414 aa13.75□□□□□ -0.21
SEC16A-206ENST00000431893 DIAPH1O60610 1272 aaKnown RBP13.75□□□□□ -0.21
SEC16A-206ENST00000431893 DNAJC2Q99543 621 aaKnown RBP13.75□□□□□ -0.21
SEC16A-206ENST00000431893 USP47Q96K76 1375 aa13.75□□□□□ -0.21
SEC16A-206ENST00000431893 CWC15Q9P013 229 aaKnown RBP13.75□□□□□ -0.21
SEC16A-206ENST00000431893 STK3Q13188 491 aa13.74□□□□□ -0.21
SEC16A-206ENST00000431893 AEBP2Q6ZN18 517 aaPredicted RBP13.74□□□□□ -0.21
SEC16A-206ENST00000431893 ERICH4A6NGS2 130 aa13.74□□□□□ -0.21
SEC16A-206ENST00000431893 RALYLQ86SE5 291 aaKnown RBP13.74□□□□□ -0.21
SEC16A-206ENST00000431893 NAT10Q9H0A0 1025 aaKnown RBP13.74□□□□□ -0.21
SEC16A-206ENST00000431893 FHOD3Q2V2M9 1422 aa13.74□□□□□ -0.21
SEC16A-206ENST00000431893 FIBPO43427 364 aa13.74□□□□□ -0.21
SEC16A-206ENST00000431893 EFCAB2Q5VUJ9 269 aa13.73□□□□□ -0.21
SEC16A-206ENST00000431893 ANKRD62A6NC57 917 aa13.73□□□□□ -0.21
SEC16A-206ENST00000431893 LEKR1Q6ZMV7 388 aa13.72□□□□□ -0.21
SEC16A-206ENST00000431893 IKQ13123 557 aaPredicted RBP13.72□□□□□ -0.21
SEC16A-206ENST00000431893 RIC3Q7Z5B4 369 aa13.72□□□□□ -0.21
SEC16A-206ENST00000431893 CDC45O75419 566 aa13.72□□□□□ -0.21
SEC16A-206ENST00000431893 CENPHQ9H3R5 247 aa13.72□□□□□ -0.21
SEC16A-206ENST00000431893 CCDC144AA2RUR9 1427 aa13.72□□□□□ -0.21
SEC16A-206ENST00000431893 DCTN1Q14203 1278 aa13.71□□□□□ -0.21
SEC16A-206ENST00000431893 CCDC173Q0VFZ6 552 aa13.71□□□□□ -0.21
SEC16A-206ENST00000431893 FSD1Q9BTV5 496 aa13.71□□□□□ -0.21
SEC16A-206ENST00000431893 TMEM132AQ24JP5 1023 aa13.71□□□□□ -0.21
SEC16A-206ENST00000431893 API5Q9BZZ5 524 aaKnown RBP13.71□□□□□ -0.21
SEC16A-206ENST00000431893 EVC2Q86UK5 1308 aa13.71□□□□□ -0.21
SEC16A-206ENST00000431893 IBSPP21815 317 aaPredicted RBP13.71□□□□□ -0.22
SEC16A-206ENST00000431893 NEFHP12036 1026 aa13.71□□□□□ -0.22
SEC16A-206ENST00000431893 CCDC88BA6NC98 1476 aa13.7□□□□□ -0.22
SEC16A-206ENST00000431893 ERC2O15083 957 aa13.7□□□□□ -0.22
SEC16A-206ENST00000431893 UQCRHLA0A096LP55 91 aa13.7□□□□□ -0.22
SEC16A-206ENST00000431893 UQCRHP07919 91 aa13.7□□□□□ -0.22
SEC16A-206ENST00000431893 PRDM10Q9NQV6 1147 aa13.7□□□□□ -0.22
SEC16A-206ENST00000431893 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.7□□□□□ -0.22
SEC16A-206ENST00000431893 DHX57Q6P158 1386 aaKnown RBP13.69□□□□□ -0.22
SEC16A-206ENST00000431893 DDX58O95786 925 aaKnown RBP13.69□□□□□ -0.22
SEC16A-206ENST00000431893 CT47B1P0C2W7 299 aaPredicted RBP13.69□□□□□ -0.22
SEC16A-206ENST00000431893 BRMS1Q9HCU9 246 aa13.69□□□□□ -0.22
SEC16A-206ENST00000431893 NEK4P51957 841 aa13.69□□□□□ -0.22
SEC16A-206ENST00000431893 RBM33Q96EV2 1170 aaKnown RBP13.69□□□□□ -0.22
SEC16A-206ENST00000431893 CCDC66A2RUB6 948 aa13.69□□□□□ -0.22
SEC16A-206ENST00000431893 ERCC4Q92889 916 aaPredicted RBP13.69□□□□□ -0.22
SEC16A-206ENST00000431893 ROCK1Q13464 1354 aa13.69□□□□□ -0.22
SEC16A-206ENST00000431893 RUNDC1Q96C34 613 aa13.68□□□□□ -0.22
SEC16A-206ENST00000431893 CDCA7LQ96GN5 454 aa13.68□□□□□ -0.22
SEC16A-206ENST00000431893 ENOX2Q16206 610 aaKnown RBP13.68□□□□□ -0.22
SEC16A-206ENST00000431893 MAGEC2Q9UBF1 373 aaPredicted RBP13.68□□□□□ -0.22
SEC16A-206ENST00000431893 CARMIL2Q6F5E8 1435 aa13.67□□□□□ -0.22
SEC16A-206ENST00000431893 SERPINC1P01008 464 aa13.67□□□□□ -0.22
SEC16A-206ENST00000431893 NINLQ9Y2I6 1382 aa13.67□□□□□ -0.22
SEC16A-206ENST00000431893 KINO60870 393 aaKnown RBP13.67□□□□□ -0.22
SEC16A-206ENST00000431893 CNTROBQ8N137 903 aa13.67□□□□□ -0.22
SEC16A-206ENST00000431893 UBTFL1P0CB47 393 aaPredicted RBP13.67□□□□□ -0.22
SEC16A-206ENST00000431893 TAX1BP1Q86VP1 789 aa13.67□□□□□ -0.22
SEC16A-206ENST00000431893 TDRD9Q8NDG6 1382 aaKnown RBP13.66□□□□□ -0.22
SEC16A-206ENST00000431893 CDK5RAP3Q96JB5 506 aa13.66□□□□□ -0.22
SEC16A-206ENST00000431893 GGNBP2Q9H3C7 697 aa13.66□□□□□ -0.22
SEC16A-206ENST00000431893 PAF1Q8N7H5 531 aa13.66□□□□□ -0.22
SEC16A-206ENST00000431893 SMARCE1Q969G3 411 aa13.66□□□□□ -0.22
SEC16A-206ENST00000431893 ZHX3Q9H4I2 956 aa13.65□□□□□ -0.22
SEC16A-206ENST00000431893 PDZRN3Q9UPQ7 1066 aa13.65□□□□□ -0.22
SEC16A-206ENST00000431893 PSME1Q06323 249 aa13.65□□□□□ -0.22
SEC16A-206ENST00000431893 KRT18P05783 430 aaKnown RBP13.65□□□□□ -0.22
SEC16A-206ENST00000431893 CECR2Q9BXF3 1484 aa13.64□□□□□ -0.23
SEC16A-206ENST00000431893 PSMA5P28066 241 aa13.64□□□□□ -0.23
SEC16A-206ENST00000431893 FILIP1LQ4L180 1135 aa13.64□□□□□ -0.23
SEC16A-206ENST00000431893 TANGO6Q9C0B7 1094 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 115.9 ms