RNA–Protein interactions for RNA: ENST00000429856.1

HMGB1P9-201, Transcript of high mobility group box 1 pseudogene 9, humanhuman

BASIC

Gene HMGB1P9, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P9-201ENST00000429856 METTL3Q86U44 580 aaKnown RBP6.98□□□□□ -1.29
HMGB1P9-201ENST00000429856 SLC27A5Q9Y2P5 690 aa6.98□□□□□ -1.29
HMGB1P9-201ENST00000429856 HIC1Q14526 733 aa6.97□□□□□ -1.29
HMGB1P9-201ENST00000429856 SUZ12Q15022 739 aaKnown RBP6.97□□□□□ -1.29
HMGB1P9-201ENST00000429856 KIFC2Q96AC6 838 aa6.97□□□□□ -1.29
HMGB1P9-201ENST00000429856 SNRPBP14678 240 aaKnown RBP6.96□□□□□ -1.3
HMGB1P9-201ENST00000429856 SMPD1P17405 629 aa6.96□□□□□ -1.3
HMGB1P9-201ENST00000429856 GRIPAP1Q4V328 841 aa6.96□□□□□ -1.3
HMGB1P9-201ENST00000429856 BRICD5Q6PL45 260 aa6.96□□□□□ -1.3
HMGB1P9-201ENST00000429856 TRIM47Q96LD4 638 aa6.96□□□□□ -1.3
HMGB1P9-201ENST00000429856 DDX11L8A8MPP1 907 aa6.95□□□□□ -1.3
HMGB1P9-201ENST00000429856 FECHP22830 423 aa6.95□□□□□ -1.3
HMGB1P9-201ENST00000429856 GCGRP47871 477 aa6.95□□□□□ -1.3
HMGB1P9-201ENST00000429856 SULF1Q8IWU6 871 aa6.95□□□□□ -1.3
HMGB1P9-201ENST00000429856 SLC16A10Q8TF71 515 aa6.95□□□□□ -1.3
HMGB1P9-201ENST00000429856 MSS51Q4VC12 460 aa6.93□□□□□ -1.3
HMGB1P9-201ENST00000429856 REPIN1Q9BWE0 567 aaKnown RBP6.93□□□□□ -1.3
HMGB1P9-201ENST00000429856 TRIM32Q13049 653 aa6.92□□□□□ -1.3
HMGB1P9-201ENST00000429856 Q3C1V9 767 aa6.92□□□□□ -1.3
HMGB1P9-201ENST00000429856 MRGPRX2Q96LB1 330 aa6.92□□□□□ -1.3
HMGB1P9-201ENST00000429856 PRDM9Q9NQV7 894 aa6.92□□□□□ -1.3
HMGB1P9-201ENST00000429856 J3QL48 77 aa6.91□□□□□ -1.3
HMGB1P9-201ENST00000429856 SMYD5Q6GMV2 418 aa6.9□□□□□ -1.3
HMGB1P9-201ENST00000429856 HPS1Q92902 700 aa6.9□□□□□ -1.3
HMGB1P9-201ENST00000429856 SEMA3EO15041 775 aa6.89□□□□□ -1.31
HMGB1P9-201ENST00000429856 GNPATO15228 680 aa6.89□□□□□ -1.31
HMGB1P9-201ENST00000429856 MMP16P51512 607 aa6.88□□□□□ -1.31
HMGB1P9-201ENST00000429856 RNF19BQ6ZMZ0 732 aa6.88□□□□□ -1.31
HMGB1P9-201ENST00000429856 BCANQ96GW7 911 aa6.88□□□□□ -1.31
HMGB1P9-201ENST00000429856 NXF1Q9UBU9 619 aaKnown RBP6.88□□□□□ -1.31
HMGB1P9-201ENST00000429856 TULP1O00294 542 aaPredicted RBP6.87□□□□□ -1.31
HMGB1P9-201ENST00000429856 LCE2CQ5TA81 110 aa6.87□□□□□ -1.31
HMGB1P9-201ENST00000429856 RC3H1Q5TC82 1133 aaKnown RBP6.87□□□□□ -1.31
HMGB1P9-201ENST00000429856 NPAS3Q8IXF0 933 aa6.87□□□□□ -1.31
HMGB1P9-201ENST00000429856 ZSCAN1Q8NBB4 408 aa6.87□□□□□ -1.31
HMGB1P9-201ENST00000429856 IRF7Q92985 503 aa6.87□□□□□ -1.31
HMGB1P9-201ENST00000429856 WNT7BP56706 349 aa6.86□□□□□ -1.31
HMGB1P9-201ENST00000429856 CCDC24Q8N4L8 307 aa6.86□□□□□ -1.31
HMGB1P9-201ENST00000429856 USB1Q9BQ65 265 aaKnown RBP6.86□□□□□ -1.31
HMGB1P9-201ENST00000429856 TESPA1A2RU30 521 aaPredicted RBP6.85□□□□□ -1.31
HMGB1P9-201ENST00000429856 ALDH1A1P00352 501 aa6.84□□□□□ -1.31
HMGB1P9-201ENST00000429856 GMPRP36959 345 aa6.84□□□□□ -1.31
HMGB1P9-201ENST00000429856 RBM26Q5T8P6 1007 aaKnown RBP6.84□□□□□ -1.31
HMGB1P9-201ENST00000429856 NLRP7Q8WX94 980 aa6.84□□□□□ -1.31
HMGB1P9-201ENST00000429856 DXOO77932 396 aaKnown RBP6.83□□□□□ -1.32
HMGB1P9-201ENST00000429856 CAPN5O15484 640 aaPredicted RBP6.81□□□□□ -1.32
HMGB1P9-201ENST00000429856 WASF2Q9Y6W5 498 aa6.81□□□□□ -1.32
HMGB1P9-201ENST00000429856 KDM4AO75164 1064 aa6.8□□□□□ -1.32
HMGB1P9-201ENST00000429856 SKOR1P84550 965 aa6.8□□□□□ -1.32
HMGB1P9-201ENST00000429856 PHOX2BQ99453 314 aa6.8□□□□□ -1.32
HMGB1P9-201ENST00000429856 H3BM21 787 aa6.79□□□□□ -1.32
HMGB1P9-201ENST00000429856 USP46P62068 366 aa6.79□□□□□ -1.32
HMGB1P9-201ENST00000429856 EHBP1Q8NDI1 1231 aa6.79□□□□□ -1.32
HMGB1P9-201ENST00000429856 CD46P15529 392 aa6.77□□□□□ -1.33
HMGB1P9-201ENST00000429856 LORP23490 312 aaPredicted RBP6.77□□□□□ -1.33
HMGB1P9-201ENST00000429856 SIAH2O43255 324 aa6.76□□□□□ -1.33
HMGB1P9-201ENST00000429856 VEGFBP49765 207 aa6.76□□□□□ -1.33
HMGB1P9-201ENST00000429856 TRIM46Q7Z4K8 759 aa6.76□□□□□ -1.33
HMGB1P9-201ENST00000429856 GPR37O15354 613 aa6.75□□□□□ -1.33
HMGB1P9-201ENST00000429856 BMP1P13497 986 aa6.75□□□□□ -1.33
HMGB1P9-201ENST00000429856 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.75□□□□□ -1.33
HMGB1P9-201ENST00000429856 JUNDP17535 347 aa6.74□□□□□ -1.33
HMGB1P9-201ENST00000429856 ZFP42Q96MM3 310 aa6.73□□□□□ -1.33
HMGB1P9-201ENST00000429856 NUDT12Q9BQG2 462 aa6.73□□□□□ -1.33
HMGB1P9-201ENST00000429856 ERBB4Q15303 1308 aa6.73□□□□□ -1.33
HMGB1P9-201ENST00000429856 PLEKHG3A1L390 1219 aa6.72□□□□□ -1.33
HMGB1P9-201ENST00000429856 SCARF1Q14162 830 aa6.72□□□□□ -1.33
HMGB1P9-201ENST00000429856 GPIHBP1Q8IV16 184 aa6.72□□□□□ -1.33
HMGB1P9-201ENST00000429856 KRTAP4-8Q9BYQ9 185 aa6.72□□□□□ -1.33
HMGB1P9-201ENST00000429856 HOXA2O43364 376 aa6.71□□□□□ -1.34
HMGB1P9-201ENST00000429856 PTCRAQ6ISU1 281 aaPredicted RBP6.71□□□□□ -1.34
HMGB1P9-201ENST00000429856 RETREG3Q86VR2 466 aa6.7□□□□□ -1.34
HMGB1P9-201ENST00000429856 HLA-CQ95604 372 aa6.7□□□□□ -1.34
HMGB1P9-201ENST00000429856 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.69□□□□□ -1.34
HMGB1P9-201ENST00000429856 SH3BP2P78314 561 aa6.69□□□□□ -1.34
HMGB1P9-201ENST00000429856 KCNMA1Q12791 1236 aa6.68□□□□□ -1.34
HMGB1P9-201ENST00000429856 MRPL14Q6P1L8 145 aaKnown RBP6.68□□□□□ -1.34
HMGB1P9-201ENST00000429856 NUTM1Q86Y26 1132 aa6.68□□□□□ -1.34
HMGB1P9-201ENST00000429856 SYMPKQ92797 1274 aaKnown RBP6.68□□□□□ -1.34
HMGB1P9-201ENST00000429856 CCNYL3P0C7X3 344 aa6.67□□□□□ -1.34
HMGB1P9-201ENST00000429856 MS4A1P11836 297 aa6.67□□□□□ -1.34
HMGB1P9-201ENST00000429856 VARSP26640 1264 aaKnown RBP6.67□□□□□ -1.34
HMGB1P9-201ENST00000429856 MDM2Q00987 491 aaPredicted RBP6.67□□□□□ -1.34
HMGB1P9-201ENST00000429856 MPNDQ8N594 471 aa6.67□□□□□ -1.34
HMGB1P9-201ENST00000429856 IRF6O14896 467 aa6.66□□□□□ -1.34
HMGB1P9-201ENST00000429856 VSIG8P0DPA2 414 aa6.66□□□□□ -1.34
HMGB1P9-201ENST00000429856 MAP2K5Q13163 448 aa6.66□□□□□ -1.34
HMGB1P9-201ENST00000429856 EVA1BQ9NVM1 165 aa6.66□□□□□ -1.34
HMGB1P9-201ENST00000429856 C6orf229H3BNL8 230 aa6.65□□□□□ -1.34
HMGB1P9-201ENST00000429856 GUCA2AQ02747 115 aa6.65□□□□□ -1.34
HMGB1P9-201ENST00000429856 NNTQ13423 1086 aa6.65□□□□□ -1.34
HMGB1P9-201ENST00000429856 TMEM151AQ8N4L1 468 aa6.65□□□□□ -1.34
HMGB1P9-201ENST00000429856 KCTD17Q8N5Z5 321 aa6.65□□□□□ -1.34
HMGB1P9-201ENST00000429856 BAP1Q92560 729 aa6.65□□□□□ -1.34
HMGB1P9-201ENST00000429856 PURBQ96QR8 312 aaKnown RBP6.65□□□□□ -1.34
HMGB1P9-201ENST00000429856 MAN1A2O60476 641 aa6.64□□□□□ -1.35
HMGB1P9-201ENST00000429856 ADH1CP00326 375 aa6.64□□□□□ -1.35
HMGB1P9-201ENST00000429856 FDX1P10109 184 aa6.64□□□□□ -1.35
HMGB1P9-201ENST00000429856 WDR4P57081 412 aaKnown RBP6.64□□□□□ -1.35
HMGB1P9-201ENST00000429856 KRI1Q8N9T8 703 aaKnown RBP6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms