RNA–Protein interactions for RNA: ENST00000429650.1

SNRNP200-202, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 2,637 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-202ENST00000429650 HECW2Q9P2P5 1572 aa17.33■□□□□ 0.37
SNRNP200-202ENST00000429650 BCAR3O75815 825 aa17.33■□□□□ 0.36
SNRNP200-202ENST00000429650 CD109Q6YHK3 1445 aa17.32■□□□□ 0.36
SNRNP200-202ENST00000429650 GGT6Q6P531 493 aa17.32■□□□□ 0.36
SNRNP200-202ENST00000429650 SLC12A5Q9H2X9 1139 aa17.31■□□□□ 0.36
SNRNP200-202ENST00000429650 ABCC3O15438 1527 aa17.31■□□□□ 0.36
SNRNP200-202ENST00000429650 MORC1Q86VD1 984 aa17.31■□□□□ 0.36
SNRNP200-202ENST00000429650 RPGRIP1LQ68CZ1 1315 aa17.3■□□□□ 0.36
SNRNP200-202ENST00000429650 WWC1Q8IX03 1113 aa17.3■□□□□ 0.36
SNRNP200-202ENST00000429650 DDRGK1Q96HY6 314 aa17.3■□□□□ 0.36
SNRNP200-202ENST00000429650 USP32Q8NFA0 1604 aa17.3■□□□□ 0.36
SNRNP200-202ENST00000429650 NPM1P06748 294 aaKnown RBP eCLIP17.3■□□□□ 0.36
SNRNP200-202ENST00000429650 TMEM132EQ6IEE7 984 aa17.3■□□□□ 0.36
SNRNP200-202ENST00000429650 FAM161AQ3B820 660 aa17.28■□□□□ 0.36
SNRNP200-202ENST00000429650 LAS1LQ9Y4W2 734 aaKnown RBP17.28■□□□□ 0.36
SNRNP200-202ENST00000429650 C8orf34Q49A92 452 aa17.28■□□□□ 0.36
SNRNP200-202ENST00000429650 SIGLEC1Q9BZZ2 1709 aa17.27■□□□□ 0.36
SNRNP200-202ENST00000429650 CAMSAP1Q5T5Y3 1602 aa17.27■□□□□ 0.36
SNRNP200-202ENST00000429650 TNNT2P45379 298 aaPredicted RBP17.27■□□□□ 0.35
SNRNP200-202ENST00000429650 GLI2P10070 1586 aa17.27■□□□□ 0.35
SNRNP200-202ENST00000429650 IQSEC2Q5JU85 1478 aa17.26■□□□□ 0.35
SNRNP200-202ENST00000429650 NINLQ9Y2I6 1382 aa17.25■□□□□ 0.35
SNRNP200-202ENST00000429650 PDE3AQ14432 1141 aa17.25■□□□□ 0.35
SNRNP200-202ENST00000429650 RUNDC1Q96C34 613 aa17.25■□□□□ 0.35
SNRNP200-202ENST00000429650 PIK3C2BO00750 1634 aa17.25■□□□□ 0.35
SNRNP200-202ENST00000429650 ARHGEF28Q8N1W1 1705 aaKnown RBP17.25■□□□□ 0.35
SNRNP200-202ENST00000429650 CGNL1Q0VF96 1302 aa17.24■□□□□ 0.35
SNRNP200-202ENST00000429650 RGS3P49796 1198 aa17.24■□□□□ 0.35
SNRNP200-202ENST00000429650 PPM1GO15355 546 aaPredicted RBP17.23■□□□□ 0.35
SNRNP200-202ENST00000429650 NEXMIFQ5QGS0 1516 aa17.23■□□□□ 0.35
SNRNP200-202ENST00000429650 TULP4Q9NRJ4 1543 aa17.23■□□□□ 0.35
SNRNP200-202ENST00000429650 NEFMP07197 916 aa17.23■□□□□ 0.35
SNRNP200-202ENST00000429650 PHF23Q9BUL5 403 aaPredicted RBP17.23■□□□□ 0.35
SNRNP200-202ENST00000429650 USP35Q9P2H5 1018 aa17.23■□□□□ 0.35
SNRNP200-202ENST00000429650 NUTM2DQ5VT03 806 aaPredicted RBP17.22■□□□□ 0.35
SNRNP200-202ENST00000429650 TCP11L2Q8N4U5 519 aa17.22■□□□□ 0.35
SNRNP200-202ENST00000429650 PUS7Q96PZ0 661 aaKnown RBP17.22■□□□□ 0.35
SNRNP200-202ENST00000429650 RRP7AQ9Y3A4 280 aaKnown RBP17.22■□□□□ 0.35
SNRNP200-202ENST00000429650 MTHFSP49914 203 aa17.22■□□□□ 0.35
SNRNP200-202ENST00000429650 NEUROD2Q15784 382 aa17.22■□□□□ 0.35
SNRNP200-202ENST00000429650 IGHDP01880 384 aa17.21■□□□□ 0.35
SNRNP200-202ENST00000429650 ANKRD36BQ8N2N9 1353 aa17.21■□□□□ 0.35
SNRNP200-202ENST00000429650 EVC2Q86UK5 1308 aa17.21■□□□□ 0.35
SNRNP200-202ENST00000429650 VGFO15240 615 aaPredicted RBP17.2■□□□□ 0.34
SNRNP200-202ENST00000429650 CANXP27824 592 aaKnown RBP17.2■□□□□ 0.34
SNRNP200-202ENST00000429650 PANK1Q8TE04 598 aa17.2■□□□□ 0.34
SNRNP200-202ENST00000429650 CLUAP1Q96AJ1 413 aa17.2■□□□□ 0.34
SNRNP200-202ENST00000429650 CFAP53Q96M91 514 aa17.19■□□□□ 0.34
SNRNP200-202ENST00000429650 COG6Q9Y2V7 657 aa17.19■□□□□ 0.34
SNRNP200-202ENST00000429650 NSD2O96028 1365 aa17.19■□□□□ 0.34
SNRNP200-202ENST00000429650 WDR63Q8IWG1 891 aa17.19■□□□□ 0.34
SNRNP200-202ENST00000429650 NEO1Q92859 1461 aa17.19■□□□□ 0.34
SNRNP200-202ENST00000429650 DIP2CQ9Y2E4 1556 aa17.19■□□□□ 0.34
SNRNP200-202ENST00000429650 RAPGEF3O95398 923 aa17.18■□□□□ 0.34
SNRNP200-202ENST00000429650 RARSP54136 660 aaKnown RBP17.18■□□□□ 0.34
SNRNP200-202ENST00000429650 VIRMAQ69YN4 1812 aaKnown RBP17.18■□□□□ 0.34
SNRNP200-202ENST00000429650 CCDC27Q2M243 656 aa17.17■□□□□ 0.34
SNRNP200-202ENST00000429650 ARHGAP31Q2M1Z3 1444 aa17.17■□□□□ 0.34
SNRNP200-202ENST00000429650 OSCARQ8IYS5 282 aa17.17■□□□□ 0.34
SNRNP200-202ENST00000429650 FRAT1Q92837 279 aaPredicted RBP17.17■□□□□ 0.34
SNRNP200-202ENST00000429650 SLC4A3P48751 1232 aa17.16■□□□□ 0.34
SNRNP200-202ENST00000429650 CABP2Q9NPB3 220 aa17.16■□□□□ 0.34
SNRNP200-202ENST00000429650 ZFYVE9O95405 1425 aa17.14■□□□□ 0.33
SNRNP200-202ENST00000429650 ADGRB2O60241 1585 aa17.14■□□□□ 0.33
SNRNP200-202ENST00000429650 IDI1Q13907 227 aa17.14■□□□□ 0.33
SNRNP200-202ENST00000429650 MAPK8IP3Q9UPT6 1336 aa17.13■□□□□ 0.33
SNRNP200-202ENST00000429650 RICTORQ6R327 1708 aa17.12■□□□□ 0.33
SNRNP200-202ENST00000429650 MYO5BQ9ULV0 1848 aa17.12■□□□□ 0.33
SNRNP200-202ENST00000429650 U2AF1L5P0DN76 240 aaPredicted RBP17.12■□□□□ 0.33
SNRNP200-202ENST00000429650 RLBP1P12271 317 aa17.12■□□□□ 0.33
SNRNP200-202ENST00000429650 U2AF1Q01081 240 aaKnown RBP eCLIP17.12■□□□□ 0.33
SNRNP200-202ENST00000429650 AAMPQ13685 434 aa17.12■□□□□ 0.33
SNRNP200-202ENST00000429650 SAFB2Q14151 953 aaKnown RBP eCLIP17.12■□□□□ 0.33
SNRNP200-202ENST00000429650 A0A1W2PP64 1363 aa17.11■□□□□ 0.33
SNRNP200-202ENST00000429650 ABCC11Q96J66 1382 aa17.11■□□□□ 0.33
SNRNP200-202ENST00000429650 TNNQ9UQP3 1299 aa17.11■□□□□ 0.33
SNRNP200-202ENST00000429650 MYH16Q9H6N6 1097 aa17.11■□□□□ 0.33
SNRNP200-202ENST00000429650 BCL2L13Q9BXK5 485 aa17.1■□□□□ 0.33
SNRNP200-202ENST00000429650 SLC52A1Q9NWF4 448 aa17.1■□□□□ 0.33
SNRNP200-202ENST00000429650 PMFBP1Q8TBY8 1022 aa17.1■□□□□ 0.33
SNRNP200-202ENST00000429650 NFKBIBQ15653 356 aa17.09■□□□□ 0.33
SNRNP200-202ENST00000429650 USP19O94966 1318 aa17.09■□□□□ 0.33
SNRNP200-202ENST00000429650 STK26Q9P289 416 aa17.09■□□□□ 0.33
SNRNP200-202ENST00000429650 PCDHB15Q9Y5E8 787 aa17.09■□□□□ 0.33
SNRNP200-202ENST00000429650 PTPRMP28827 1452 aa17.08■□□□□ 0.33
SNRNP200-202ENST00000429650 ANO8Q9HCE9 1232 aaPredicted RBP17.08■□□□□ 0.33
SNRNP200-202ENST00000429650 PREX1Q8TCU6 1659 aa17.08■□□□□ 0.32
SNRNP200-202ENST00000429650 TMEM131LA2VDJ0 1609 aa17.08■□□□□ 0.32
SNRNP200-202ENST00000429650 YEATS2Q9ULM3 1422 aa17.08■□□□□ 0.32
SNRNP200-202ENST00000429650 SRPK2P78362 688 aaKnown RBP17.08■□□□□ 0.32
SNRNP200-202ENST00000429650 COL3A1P02461 1466 aaPredicted RBP17.07■□□□□ 0.32
SNRNP200-202ENST00000429650 ANKRD26Q9UPS8 1709 aa17.07■□□□□ 0.32
SNRNP200-202ENST00000429650 CLTCQ00610 1675 aaKnown RBP17.06■□□□□ 0.32
SNRNP200-202ENST00000429650 GGNBP2Q9H3C7 697 aa17.06■□□□□ 0.32
SNRNP200-202ENST00000429650 ATAD2Q6PL18 1390 aa17.06■□□□□ 0.32
SNRNP200-202ENST00000429650 PLEKHF1Q96S99 279 aa17.05■□□□□ 0.32
SNRNP200-202ENST00000429650 SEC24BO95487 1268 aa17.04■□□□□ 0.32
SNRNP200-202ENST00000429650 MED14O60244 1454 aa17.04■□□□□ 0.32
SNRNP200-202ENST00000429650 CD163L1Q9NR16 1453 aa17.04■□□□□ 0.32
SNRNP200-202ENST00000429650 CT47B1P0C2W7 299 aaPredicted RBP17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms