RNA–Protein interactions for RNA: ENST00000426217.1

MTND4P28-201, Transcript of MT-ND4 pseudogene 28, humanhuman

BASIC

Gene MTND4P28, Length 387 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTND4P28-201ENST00000426217 MSS51Q4VC12 460 aa10.23□□□□□ -0.77
MTND4P28-201ENST00000426217 RNF19BQ6ZMZ0 732 aa10.23□□□□□ -0.77
MTND4P28-201ENST00000426217 TRIM47Q96LD4 638 aa10.23□□□□□ -0.77
MTND4P28-201ENST00000426217 J3QL48 77 aa10.22□□□□□ -0.77
MTND4P28-201ENST00000426217 MRGPRX2Q96LB1 330 aa10.21□□□□□ -0.77
MTND4P28-201ENST00000426217 GPR37O15354 613 aa10.2□□□□□ -0.78
MTND4P28-201ENST00000426217 ZBTB24O43167 697 aaPredicted RBP10.2□□□□□ -0.78
MTND4P28-201ENST00000426217 TRIM32Q13049 653 aa10.2□□□□□ -0.78
MTND4P28-201ENST00000426217 PHOX2BQ99453 314 aa10.2□□□□□ -0.78
MTND4P28-201ENST00000426217 RBM26Q5T8P6 1007 aaKnown RBP10.18□□□□□ -0.78
MTND4P28-201ENST00000426217 HPS1Q92902 700 aa10.18□□□□□ -0.78
MTND4P28-201ENST00000426217 MMP16P51512 607 aa10.17□□□□□ -0.78
MTND4P28-201ENST00000426217 GNPATO15228 680 aa10.16□□□□□ -0.78
MTND4P28-201ENST00000426217 SENP2Q9HC62 589 aa10.16□□□□□ -0.78
MTND4P28-201ENST00000426217 LORP23490 312 aaPredicted RBP10.13□□□□□ -0.79
MTND4P28-201ENST00000426217 SULF1Q8IWU6 871 aa10.13□□□□□ -0.79
MTND4P28-201ENST00000426217 TESPA1A2RU30 521 aaPredicted RBP10.11□□□□□ -0.79
MTND4P28-201ENST00000426217 DXOO77932 396 aaKnown RBP10.11□□□□□ -0.79
MTND4P28-201ENST00000426217 SKOR1P84550 965 aa10.11□□□□□ -0.79
MTND4P28-201ENST00000426217 KIFC2Q96AC6 838 aa10.1□□□□□ -0.79
MTND4P28-201ENST00000426217 RTN4Q9NQC3 1192 aaKnown RBP10.1□□□□□ -0.79
MTND4P28-201ENST00000426217 RC3H1Q5TC82 1133 aaKnown RBP10.09□□□□□ -0.79
MTND4P28-201ENST00000426217 P3H3Q8IVL6 736 aa10.09□□□□□ -0.79
MTND4P28-201ENST00000426217 REPIN1Q9BWE0 567 aaKnown RBP10.09□□□□□ -0.79
MTND4P28-201ENST00000426217 Q3C1V9 767 aa10.08□□□□□ -0.8
MTND4P28-201ENST00000426217 AMER1Q5JTC6 1135 aaPredicted RBP10.08□□□□□ -0.8
MTND4P28-201ENST00000426217 LOC100996750A0A140TA64 210 aa10.07□□□□□ -0.8
MTND4P28-201ENST00000426217 GMPRP36959 345 aa10.07□□□□□ -0.8
MTND4P28-201ENST00000426217 USB1Q9BQ65 265 aaKnown RBP10.07□□□□□ -0.8
MTND4P28-201ENST00000426217 KRTAP4-6Q9BYQ5 205 aa10.07□□□□□ -0.8
MTND4P28-201ENST00000426217 GRIPAP1Q4V328 841 aa10.06□□□□□ -0.8
MTND4P28-201ENST00000426217 NXF1Q9UBU9 619 aaKnown RBP10.05□□□□□ -0.8
MTND4P28-201ENST00000426217 WNT7BP56706 349 aa10.04□□□□□ -0.8
MTND4P28-201ENST00000426217 HLA-CQ95604 372 aa10.04□□□□□ -0.8
MTND4P28-201ENST00000426217 CD46P15529 392 aa10.03□□□□□ -0.8
MTND4P28-201ENST00000426217 TRIM46Q7Z4K8 759 aa10.03□□□□□ -0.8
MTND4P28-201ENST00000426217 ALDH1A1P00352 501 aa10.02□□□□□ -0.81
MTND4P28-201ENST00000426217 BMP1P13497 986 aa10.02□□□□□ -0.81
MTND4P28-201ENST00000426217 CCDC24Q8N4L8 307 aa10.02□□□□□ -0.81
MTND4P28-201ENST00000426217 SLC16A10Q8TF71 515 aa10.02□□□□□ -0.81
MTND4P28-201ENST00000426217 SIAH2O43255 324 aa10.01□□□□□ -0.81
MTND4P28-201ENST00000426217 ZSCAN1Q8NBB4 408 aa10.01□□□□□ -0.81
MTND4P28-201ENST00000426217 VEGFBP49765 207 aa10□□□□□ -0.81
MTND4P28-201ENST00000426217 FAM181BA6NEQ2 426 aa9.99□□□□□ -0.81
MTND4P28-201ENST00000426217 KDM4AO75164 1064 aa9.99□□□□□ -0.81
MTND4P28-201ENST00000426217 ERBB4Q15303 1308 aa9.99□□□□□ -0.81
MTND4P28-201ENST00000426217 SMYD5Q6GMV2 418 aa9.98□□□□□ -0.81
MTND4P28-201ENST00000426217 NPAS3Q8IXF0 933 aa9.98□□□□□ -0.81
MTND4P28-201ENST00000426217 IRF7Q92985 503 aa9.98□□□□□ -0.81
MTND4P28-201ENST00000426217 H3BM21 787 aa9.97□□□□□ -0.81
MTND4P28-201ENST00000426217 PTCRAQ6ISU1 281 aaPredicted RBP9.96□□□□□ -0.82
MTND4P28-201ENST00000426217 CAPN5O15484 640 aaPredicted RBP9.94□□□□□ -0.82
MTND4P28-201ENST00000426217 HOXA2O43364 376 aa9.94□□□□□ -0.82
MTND4P28-201ENST00000426217 JUNDP17535 347 aa9.94□□□□□ -0.82
MTND4P28-201ENST00000426217 GUCA2AQ02747 115 aa9.94□□□□□ -0.82
MTND4P28-201ENST00000426217 SYMPKQ92797 1274 aaKnown RBP9.93□□□□□ -0.82
MTND4P28-201ENST00000426217 USP46P62068 366 aa9.92□□□□□ -0.82
MTND4P28-201ENST00000426217 EHBP1Q8NDI1 1231 aa9.92□□□□□ -0.82
MTND4P28-201ENST00000426217 GPIHBP1Q8IV16 184 aa9.91□□□□□ -0.82
MTND4P28-201ENST00000426217 ZFP42Q96MM3 310 aa9.9□□□□□ -0.82
MTND4P28-201ENST00000426217 WASF2Q9Y6W5 498 aa9.89□□□□□ -0.83
MTND4P28-201ENST00000426217 SH3BP2P78314 561 aa9.88□□□□□ -0.83
MTND4P28-201ENST00000426217 NUDT12Q9BQG2 462 aa9.88□□□□□ -0.83
MTND4P28-201ENST00000426217 MDM2Q00987 491 aaPredicted RBP9.87□□□□□ -0.83
MTND4P28-201ENST00000426217 MAP2K5Q13163 448 aa9.86□□□□□ -0.83
MTND4P28-201ENST00000426217 RETREG3Q86VR2 466 aa9.85□□□□□ -0.83
MTND4P28-201ENST00000426217 TLL2Q9Y6L7 1015 aa9.84□□□□□ -0.83
MTND4P28-201ENST00000426217 IRF6O14896 467 aa9.83□□□□□ -0.84
MTND4P28-201ENST00000426217 VSIG8P0DPA2 414 aa9.83□□□□□ -0.84
MTND4P28-201ENST00000426217 SUZ12Q15022 739 aaKnown RBP9.83□□□□□ -0.84
MTND4P28-201ENST00000426217 PCDHGC3Q9UN70 934 aa9.82□□□□□ -0.84
MTND4P28-201ENST00000426217 SOBPA7XYQ1 873 aa9.81□□□□□ -0.84
MTND4P28-201ENST00000426217 CCNYL3P0C7X3 344 aa9.81□□□□□ -0.84
MTND4P28-201ENST00000426217 GSK3AP49840 483 aa9.81□□□□□ -0.84
MTND4P28-201ENST00000426217 MRPL14Q6P1L8 145 aaKnown RBP9.8□□□□□ -0.84
MTND4P28-201ENST00000426217 MS4A1P11836 297 aa9.79□□□□□ -0.84
MTND4P28-201ENST00000426217 TIMP2P16035 220 aa9.79□□□□□ -0.84
MTND4P28-201ENST00000426217 NNTQ13423 1086 aa9.79□□□□□ -0.84
MTND4P28-201ENST00000426217 LINC01559Q495D7 138 aa9.79□□□□□ -0.84
MTND4P28-201ENST00000426217 PURBQ96QR8 312 aaKnown RBP9.79□□□□□ -0.84
MTND4P28-201ENST00000426217 UNC93B1Q9H1C4 597 aa9.79□□□□□ -0.84
MTND4P28-201ENST00000426217 FAM217BQ9NTX9 383 aaPredicted RBP9.79□□□□□ -0.84
MTND4P28-201ENST00000426217 BAP1Q92560 729 aa9.78□□□□□ -0.84
MTND4P28-201ENST00000426217 KLF16Q9BXK1 252 aaPredicted RBP9.78□□□□□ -0.84
MTND4P28-201ENST00000426217 MPNDQ8N594 471 aa9.77□□□□□ -0.85
MTND4P28-201ENST00000426217 EVA1BQ9NVM1 165 aa9.77□□□□□ -0.85
MTND4P28-201ENST00000426217 PTPRNQ16849 979 aa9.76□□□□□ -0.85
MTND4P28-201ENST00000426217 ZNF511Q8NB15 262 aa9.76□□□□□ -0.85
MTND4P28-201ENST00000426217 FDX1P10109 184 aa9.75□□□□□ -0.85
MTND4P28-201ENST00000426217 KCNMA1Q12791 1236 aa9.75□□□□□ -0.85
MTND4P28-201ENST00000426217 GPCPD1Q9NPB8 672 aa9.75□□□□□ -0.85
MTND4P28-201ENST00000426217 C6orf229H3BNL8 230 aa9.74□□□□□ -0.85
MTND4P28-201ENST00000426217 VARSP26640 1264 aaKnown RBP9.74□□□□□ -0.85
MTND4P28-201ENST00000426217 WDR4P57081 412 aaKnown RBP9.74□□□□□ -0.85
MTND4P28-201ENST00000426217 SCARF1Q14162 830 aa9.74□□□□□ -0.85
MTND4P28-201ENST00000426217 CCDC102AQ96A19 550 aa9.74□□□□□ -0.85
MTND4P28-201ENST00000426217 MINK1Q8N4C8 1332 aaPredicted RBP9.74□□□□□ -0.85
MTND4P28-201ENST00000426217 ADH1CP00326 375 aa9.73□□□□□ -0.85
MTND4P28-201ENST00000426217 KCNH2Q12809 1159 aa9.73□□□□□ -0.85
MTND4P28-201ENST00000426217 NUTM1Q86Y26 1132 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms