RNA–Protein interactions for RNA: ENST00000426150.5

SSBP3-207, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 851 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-207ENST00000426150 PBX2P40425 430 aa10.96□□□□□ -0.65
SSBP3-207ENST00000426150 FUT2Q10981 343 aa10.96□□□□□ -0.65
SSBP3-207ENST00000426150 SAMD7Q7Z3H4 446 aa10.96□□□□□ -0.65
SSBP3-207ENST00000426150 NDUFB9Q9Y6M9 179 aa10.96□□□□□ -0.65
SSBP3-207ENST00000426150 CFHP08603 1231 aa10.95□□□□□ -0.66
SSBP3-207ENST00000426150 GRIPAP1Q4V328 841 aa10.95□□□□□ -0.66
SSBP3-207ENST00000426150 HELBQ8NG08 1087 aaPredicted RBP10.95□□□□□ -0.66
SSBP3-207ENST00000426150 CALR3Q96L12 384 aaKnown RBP10.95□□□□□ -0.66
SSBP3-207ENST00000426150 HMX1Q9NP08 348 aaPredicted RBP10.95□□□□□ -0.66
SSBP3-207ENST00000426150 FAM205CA6NFA0 338 aa10.94□□□□□ -0.66
SSBP3-207ENST00000426150 LAPTM4BQ86VI4 370 aa10.94□□□□□ -0.66
SSBP3-207ENST00000426150 GLMNQ92990 594 aa10.94□□□□□ -0.66
SSBP3-207ENST00000426150 CFAP99D6REC4 459 aa10.93□□□□□ -0.66
SSBP3-207ENST00000426150 IRF5Q13568 498 aa10.93□□□□□ -0.66
SSBP3-207ENST00000426150 ZNF687Q8N1G0 1237 aa10.93□□□□□ -0.66
SSBP3-207ENST00000426150 TRIM34Q9BYJ4 488 aa10.93□□□□□ -0.66
SSBP3-207ENST00000426150 C6orf229H3BNL8 230 aa10.92□□□□□ -0.66
SSBP3-207ENST00000426150 TSC1Q92574 1164 aa10.92□□□□□ -0.66
SSBP3-207ENST00000426150 HS3ST6Q96QI5 342 aa10.92□□□□□ -0.66
SSBP3-207ENST00000426150 NBPF3Q9H094 633 aa10.92□□□□□ -0.66
SSBP3-207ENST00000426150 GPR37L1O60883 481 aa10.91□□□□□ -0.66
SSBP3-207ENST00000426150 ATP6V1AP38606 617 aa10.91□□□□□ -0.66
SSBP3-207ENST00000426150 LRRN4Q8WUT4 740 aa10.91□□□□□ -0.66
SSBP3-207ENST00000426150 RNF40O75150 1001 aa10.9□□□□□ -0.66
SSBP3-207ENST00000426150 BHMG1C9JSJ3 638 aaPredicted RBP10.89□□□□□ -0.67
SSBP3-207ENST00000426150 WASHC4Q2M389 1173 aa10.88□□□□□ -0.67
SSBP3-207ENST00000426150 SYMPKQ92797 1274 aaKnown RBP10.88□□□□□ -0.67
SSBP3-207ENST00000426150 ZFRQ96KR1 1074 aaKnown RBP10.88□□□□□ -0.67
SSBP3-207ENST00000426150 KMT5BQ4FZB7 885 aa10.87□□□□□ -0.67
SSBP3-207ENST00000426150 TRAIPQ9BWF2 469 aa10.87□□□□□ -0.67
SSBP3-207ENST00000426150 HDGFL1Q5TGJ6 251 aa10.86□□□□□ -0.67
SSBP3-207ENST00000426150 PRR7Q8TB68 274 aa10.86□□□□□ -0.67
SSBP3-207ENST00000426150 ADAMTS19Q8TE59 1207 aa10.86□□□□□ -0.67
SSBP3-207ENST00000426150 ZBTB7CA1YPR0 619 aa10.85□□□□□ -0.67
SSBP3-207ENST00000426150 TK2O00142 265 aa10.85□□□□□ -0.67
SSBP3-207ENST00000426150 PPP1R15AO75807 674 aaPredicted RBP10.85□□□□□ -0.67
SSBP3-207ENST00000426150 EPS8L1Q8TE68 723 aa10.85□□□□□ -0.67
SSBP3-207ENST00000426150 NECTIN2Q92692 538 aa10.85□□□□□ -0.67
SSBP3-207ENST00000426150 MORN1Q5T089 497 aa10.84□□□□□ -0.67
SSBP3-207ENST00000426150 RETREG2Q8NC44 543 aa10.84□□□□□ -0.67
SSBP3-207ENST00000426150 VAC14Q08AM6 782 aa10.83□□□□□ -0.68
SSBP3-207ENST00000426150 RETREG3Q86VR2 466 aa10.83□□□□□ -0.68
SSBP3-207ENST00000426150 MRPL50Q8N5N7 158 aaKnown RBP10.83□□□□□ -0.68
SSBP3-207ENST00000426150 ACTN4O43707 911 aaKnown RBP10.82□□□□□ -0.68
SSBP3-207ENST00000426150 PUS10Q3MIT2 529 aaKnown RBP10.82□□□□□ -0.68
SSBP3-207ENST00000426150 LRCH3Q96II8 777 aa10.82□□□□□ -0.68
SSBP3-207ENST00000426150 SLC27A5Q9Y2P5 690 aa10.82□□□□□ -0.68
SSBP3-207ENST00000426150 PER1O15534 1290 aaPredicted RBP10.81□□□□□ -0.68
SSBP3-207ENST00000426150 Q3C1V9 767 aa10.81□□□□□ -0.68
SSBP3-207ENST00000426150 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.81□□□□□ -0.68
SSBP3-207ENST00000426150 RB1CC1Q8TDY2 1594 aa10.81□□□□□ -0.68
SSBP3-207ENST00000426150 NR6A1Q15406 480 aa10.8□□□□□ -0.68
SSBP3-207ENST00000426150 DESI1Q6ICB0 168 aa10.79□□□□□ -0.68
SSBP3-207ENST00000426150 ALG2Q9H553 416 aa10.79□□□□□ -0.68
SSBP3-207ENST00000426150 ADGRD1Q6QNK2 874 aa10.78□□□□□ -0.68
SSBP3-207ENST00000426150 PRR14Q9BWN1 585 aa10.78□□□□□ -0.68
SSBP3-207ENST00000426150 KCTD17Q8N5Z5 321 aa10.77□□□□□ -0.69
SSBP3-207ENST00000426150 ACIN1Q9UKV3 1341 aaKnown RBP10.77□□□□□ -0.69
SSBP3-207ENST00000426150 LSM11P83369 360 aaKnown RBP eCLIP10.76□□□□□ -0.69
SSBP3-207ENST00000426150 CFAP70Q5T0N1 1121 aa10.76□□□□□ -0.69
SSBP3-207ENST00000426150 PBXIP1Q96AQ6 731 aa10.76□□□□□ -0.69
SSBP3-207ENST00000426150 HRO43593 1189 aa10.75□□□□□ -0.69
SSBP3-207ENST00000426150 SOX11P35716 441 aa10.75□□□□□ -0.69
SSBP3-207ENST00000426150 LYPD8Q6UX82 237 aa10.75□□□□□ -0.69
SSBP3-207ENST00000426150 RNF19BQ6ZMZ0 732 aa10.75□□□□□ -0.69
SSBP3-207ENST00000426150 PPP1R12CQ9BZL4 782 aa10.75□□□□□ -0.69
SSBP3-207ENST00000426150 RFX1P22670 979 aa10.74□□□□□ -0.69
SSBP3-207ENST00000426150 BLOC1S3Q6QNY0 202 aa10.74□□□□□ -0.69
SSBP3-207ENST00000426150 KRTAP3-3Q9BYR6 98 aa10.74□□□□□ -0.69
SSBP3-207ENST00000426150 KRTAP3-2Q9BYR7 98 aa10.74□□□□□ -0.69
SSBP3-207ENST00000426150 ANKK1Q8NFD2 765 aa10.73□□□□□ -0.69
SSBP3-207ENST00000426150 USB1Q9BQ65 265 aaKnown RBP10.73□□□□□ -0.69
SSBP3-207ENST00000426150 SALL2Q9Y467 1007 aaPredicted RBP10.73□□□□□ -0.69
SSBP3-207ENST00000426150 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.72□□□□□ -0.69
SSBP3-207ENST00000426150 PALM3A6NDB9 673 aaPredicted RBP10.72□□□□□ -0.69
SSBP3-207ENST00000426150 PPP4CP60510 307 aa10.72□□□□□ -0.69
SSBP3-207ENST00000426150 SRPK2P78362 688 aaKnown RBP10.72□□□□□ -0.69
SSBP3-207ENST00000426150 BRICD5Q6PL45 260 aa10.72□□□□□ -0.69
SSBP3-207ENST00000426150 PNMA1Q8ND90 353 aa10.72□□□□□ -0.69
SSBP3-207ENST00000426150 UCN2Q96RP3 112 aa10.72□□□□□ -0.69
SSBP3-207ENST00000426150 APLP1P51693 650 aa10.71□□□□□ -0.69
SSBP3-207ENST00000426150 AEBP1Q8IUX7 1158 aa10.71□□□□□ -0.69
SSBP3-207ENST00000426150 HPS5Q9UPZ3 1129 aa10.71□□□□□ -0.69
SSBP3-207ENST00000426150 SOWAHBA6NEL2 793 aa10.7□□□□□ -0.7
SSBP3-207ENST00000426150 GOLGA8CPA6NN73 597 aa10.7□□□□□ -0.7
SSBP3-207ENST00000426150 PDE4CQ08493 712 aa10.7□□□□□ -0.7
SSBP3-207ENST00000426150 SEMA3FQ13275 785 aa10.7□□□□□ -0.7
SSBP3-207ENST00000426150 BCAMP50895 628 aa10.69□□□□□ -0.7
SSBP3-207ENST00000426150 SCUBE3Q8IX30 993 aa10.69□□□□□ -0.7
SSBP3-207ENST00000426150 STAC3Q96MF2 364 aa10.69□□□□□ -0.7
SSBP3-207ENST00000426150 TFIP11Q9UBB9 837 aaKnown RBP10.69□□□□□ -0.7
SSBP3-207ENST00000426150 LMOD1P29536 600 aaPredicted RBP10.68□□□□□ -0.7
SSBP3-207ENST00000426150 EIF4G2P78344 907 aaKnown RBP eCLIP10.68□□□□□ -0.78e-7■■■□□ 16.1
SSBP3-207ENST00000426150 THAP11Q96EK4 314 aa10.68□□□□□ -0.7
SSBP3-207ENST00000426150 TSR3Q9UJK0 312 aaKnown RBP10.68□□□□□ -0.7
SSBP3-207ENST00000426150 CCDC9Q9Y3X0 531 aaKnown RBP10.68□□□□□ -0.7
SSBP3-207ENST00000426150 PCDHB3Q9Y5E6 796 aa10.68□□□□□ -0.7
SSBP3-207ENST00000426150 NR1I2O75469 434 aa10.67□□□□□ -0.7
SSBP3-207ENST00000426150 FMNL1O95466 1100 aaPredicted RBP10.67□□□□□ -0.7
SSBP3-207ENST00000426150 NR1H3Q13133 447 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms