RNA–Protein interactions for RNA: ENST00000425971.2

HMGB1P32-201, Transcript of high mobility group box 1 pseudogene 32, humanhuman

BASIC

Gene HMGB1P32, Length 565 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P32-201ENST00000425971 CCDC82Q8N4S0 544 aa11.9□□□□□ -0.5
HMGB1P32-201ENST00000425971 LSM11P83369 360 aaKnown RBP eCLIP11.89□□□□□ -0.51
HMGB1P32-201ENST00000425971 GRIPAP1Q4V328 841 aa11.89□□□□□ -0.51
HMGB1P32-201ENST00000425971 ADGRD1Q6QNK2 874 aa11.89□□□□□ -0.51
HMGB1P32-201ENST00000425971 CCDC180Q9P1Z9 1646 aa11.89□□□□□ -0.51
HMGB1P32-201ENST00000425971 MTMR2Q13614 643 aa11.88□□□□□ -0.51
HMGB1P32-201ENST00000425971 GDPD2Q9HCC8 539 aa11.88□□□□□ -0.51
HMGB1P32-201ENST00000425971 HRO43593 1189 aa11.87□□□□□ -0.51
HMGB1P32-201ENST00000425971 ATP6V1AP38606 617 aa11.87□□□□□ -0.51
HMGB1P32-201ENST00000425971 KMT5BQ4FZB7 885 aa11.87□□□□□ -0.51
HMGB1P32-201ENST00000425971 MRPL50Q8N5N7 158 aaKnown RBP11.87□□□□□ -0.51
HMGB1P32-201ENST00000425971 GJD4Q96KN9 370 aaPredicted RBP11.87□□□□□ -0.51
HMGB1P32-201ENST00000425971 ZNF777Q9ULD5 760 aaPredicted RBP11.87□□□□□ -0.51
HMGB1P32-201ENST00000425971 RNF40O75150 1001 aa11.86□□□□□ -0.51
HMGB1P32-201ENST00000425971 ANKRD13DQ6ZTN6 518 aa11.86□□□□□ -0.51
HMGB1P32-201ENST00000425971 SPNS2Q8IVW8 549 aa11.86□□□□□ -0.51
HMGB1P32-201ENST00000425971 NECTIN2Q92692 538 aa11.85□□□□□ -0.51
HMGB1P32-201ENST00000425971 TBC1D2BQ9UPU7 963 aa11.85□□□□□ -0.51
HMGB1P32-201ENST00000425971 CFAP99D6REC4 459 aa11.84□□□□□ -0.51
HMGB1P32-201ENST00000425971 LRCH3Q96II8 777 aa11.84□□□□□ -0.51
HMGB1P32-201ENST00000425971 ACTN4O43707 911 aaKnown RBP11.83□□□□□ -0.52
HMGB1P32-201ENST00000425971 CTDSPL2Q05D32 466 aa11.83□□□□□ -0.52
HMGB1P32-201ENST00000425971 MORN1Q5T089 497 aa11.83□□□□□ -0.52
HMGB1P32-201ENST00000425971 HELBQ8NG08 1087 aaPredicted RBP11.83□□□□□ -0.52
HMGB1P32-201ENST00000425971 PRM3Q9NNZ6 103 aa11.83□□□□□ -0.52
HMGB1P32-201ENST00000425971 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.83□□□□□ -0.52
HMGB1P32-201ENST00000425971 ZNF330Q9Y3S2 320 aaPredicted RBP11.83□□□□□ -0.52
HMGB1P32-201ENST00000425971 HMX1Q9NP08 348 aaPredicted RBP11.82□□□□□ -0.52
HMGB1P32-201ENST00000425971 C6orf229H3BNL8 230 aa11.81□□□□□ -0.52
HMGB1P32-201ENST00000425971 ABL2P42684 1182 aa11.81□□□□□ -0.52
HMGB1P32-201ENST00000425971 TRIM34Q9BYJ4 488 aa11.81□□□□□ -0.52
HMGB1P32-201ENST00000425971 GPR37L1O60883 481 aa11.8□□□□□ -0.52
HMGB1P32-201ENST00000425971 SYMPKQ92797 1274 aaKnown RBP11.8□□□□□ -0.52
HMGB1P32-201ENST00000425971 NDUFB9Q9Y6M9 179 aa11.8□□□□□ -0.52
HMGB1P32-201ENST00000425971 WWC1Q8IX03 1113 aa11.79□□□□□ -0.52
HMGB1P32-201ENST00000425971 RETREG3Q86VR2 466 aa11.78□□□□□ -0.52
HMGB1P32-201ENST00000425971 SERPINA10Q9UK55 444 aa11.78□□□□□ -0.52
HMGB1P32-201ENST00000425971 SOWAHBA6NEL2 793 aa11.77□□□□□ -0.53
HMGB1P32-201ENST00000425971 MMRN1Q13201 1228 aa11.77□□□□□ -0.53
HMGB1P32-201ENST00000425971 IRF5Q13568 498 aa11.77□□□□□ -0.53
HMGB1P32-201ENST00000425971 PUS10Q3MIT2 529 aaKnown RBP11.77□□□□□ -0.53
HMGB1P32-201ENST00000425971 ANKK1Q8NFD2 765 aa11.77□□□□□ -0.53
HMGB1P32-201ENST00000425971 PRR7Q8TB68 274 aa11.77□□□□□ -0.53
HMGB1P32-201ENST00000425971 LRRN4Q8WUT4 740 aa11.77□□□□□ -0.53
HMGB1P32-201ENST00000425971 PRR14Q9BWN1 585 aa11.77□□□□□ -0.53
HMGB1P32-201ENST00000425971 SLC27A5Q9Y2P5 690 aa11.77□□□□□ -0.53
HMGB1P32-201ENST00000425971 TSC1Q92574 1164 aa11.76□□□□□ -0.53
HMGB1P32-201ENST00000425971 CCDC97Q96F63 343 aaPredicted RBP11.76□□□□□ -0.53
HMGB1P32-201ENST00000425971 POM121CA8CG34 1229 aa11.74□□□□□ -0.53
HMGB1P32-201ENST00000425971 Q3C1V9 767 aa11.74□□□□□ -0.53
HMGB1P32-201ENST00000425971 HPS5Q9UPZ3 1129 aa11.74□□□□□ -0.53
HMGB1P32-201ENST00000425971 DESI1Q6ICB0 168 aa11.73□□□□□ -0.53
HMGB1P32-201ENST00000425971 RB1CC1Q8TDY2 1594 aa11.72□□□□□ -0.53
HMGB1P32-201ENST00000425971 GOLGA8CPA6NN73 597 aa11.72□□□□□ -0.53
HMGB1P32-201ENST00000425971 BCAMP50895 628 aa11.72□□□□□ -0.53
HMGB1P32-201ENST00000425971 APLP1P51693 650 aa11.72□□□□□ -0.53
HMGB1P32-201ENST00000425971 PPP4CP60510 307 aa11.72□□□□□ -0.53
HMGB1P32-201ENST00000425971 BLOC1S3Q6QNY0 202 aa11.71□□□□□ -0.53
HMGB1P32-201ENST00000425971 RNF19BQ6ZMZ0 732 aa11.71□□□□□ -0.53
HMGB1P32-201ENST00000425971 TSR3Q9UJK0 312 aaKnown RBP11.71□□□□□ -0.53
HMGB1P32-201ENST00000425971 SALL2Q9Y467 1007 aaPredicted RBP11.71□□□□□ -0.53
HMGB1P32-201ENST00000425971 PER1O15534 1290 aaPredicted RBP11.7□□□□□ -0.54
HMGB1P32-201ENST00000425971 EPS8L1Q8TE68 723 aa11.7□□□□□ -0.54
HMGB1P32-201ENST00000425971 GLMNQ92990 594 aa11.7□□□□□ -0.54
HMGB1P32-201ENST00000425971 STAC3Q96MF2 364 aa11.7□□□□□ -0.54
HMGB1P32-201ENST00000425971 MYT1LQ9UL68 1186 aa11.7□□□□□ -0.54
HMGB1P32-201ENST00000425971 WASHC4Q2M389 1173 aa11.69□□□□□ -0.54
HMGB1P32-201ENST00000425971 WNT2BQ93097 391 aa11.69□□□□□ -0.54
HMGB1P32-201ENST00000425971 BRICD5Q6PL45 260 aa11.68□□□□□ -0.54
HMGB1P32-201ENST00000425971 THAP11Q96EK4 314 aa11.68□□□□□ -0.54
HMGB1P32-201ENST00000425971 CALR3Q96L12 384 aaKnown RBP11.67□□□□□ -0.54
HMGB1P32-201ENST00000425971 USB1Q9BQ65 265 aaKnown RBP11.67□□□□□ -0.54
HMGB1P32-201ENST00000425971 NR6A1Q15406 480 aa11.66□□□□□ -0.54
HMGB1P32-201ENST00000425971 LYPD8Q6UX82 237 aa11.66□□□□□ -0.54
HMGB1P32-201ENST00000425971 ADAMTS19Q8TE59 1207 aa11.66□□□□□ -0.54
HMGB1P32-201ENST00000425971 RNF166Q96A37 237 aaPredicted RBP11.66□□□□□ -0.54
HMGB1P32-201ENST00000425971 PCDHB3Q9Y5E6 796 aa11.66□□□□□ -0.54
HMGB1P32-201ENST00000425971 SCUBE3Q8IX30 993 aa11.65□□□□□ -0.54
HMGB1P32-201ENST00000425971 NR1I2O75469 434 aa11.64□□□□□ -0.55
HMGB1P32-201ENST00000425971 FMNL1O95466 1100 aaPredicted RBP11.63□□□□□ -0.55
HMGB1P32-201ENST00000425971 VAC14Q08AM6 782 aa11.62□□□□□ -0.55
HMGB1P32-201ENST00000425971 WBP1LQ9NX94 342 aa11.62□□□□□ -0.55
HMGB1P32-201ENST00000425971 F12P00748 615 aaPredicted RBP11.6□□□□□ -0.55
HMGB1P32-201ENST00000425971 JUNDP17535 347 aa11.6□□□□□ -0.55
HMGB1P32-201ENST00000425971 HDGFL1Q5TGJ6 251 aa11.6□□□□□ -0.55
HMGB1P32-201ENST00000425971 THSD4Q6ZMP0 1018 aa11.6□□□□□ -0.55
HMGB1P32-201ENST00000425971 MSS51Q4VC12 460 aa11.59□□□□□ -0.55
HMGB1P32-201ENST00000425971 ALG2Q9H553 416 aa11.59□□□□□ -0.55
HMGB1P32-201ENST00000425971 PTPRNQ16849 979 aa11.58□□□□□ -0.56
HMGB1P32-201ENST00000425971 SOX11P35716 441 aa11.57□□□□□ -0.56
HMGB1P32-201ENST00000425971 CECR2Q9BXF3 1484 aa11.57□□□□□ -0.56
HMGB1P32-201ENST00000425971 PNMA1Q8ND90 353 aa11.56□□□□□ -0.56
HMGB1P32-201ENST00000425971 PPP1R15AO75807 674 aaPredicted RBP11.55□□□□□ -0.56
HMGB1P32-201ENST00000425971 DXOO77932 396 aaKnown RBP11.55□□□□□ -0.56
HMGB1P32-201ENST00000425971 FAM160A2Q8N612 972 aaPredicted RBP11.54□□□□□ -0.56
HMGB1P32-201ENST00000425971 MAP10Q9P2G4 905 aa11.54□□□□□ -0.56
HMGB1P32-201ENST00000425971 FKBPLQ9UIM3 349 aa11.54□□□□□ -0.56
HMGB1P32-201ENST00000425971 ZC3H4Q9UPT8 1303 aaKnown RBP11.54□□□□□ -0.56
HMGB1P32-201ENST00000425971 PDIA4P13667 645 aaKnown RBP11.53□□□□□ -0.56
HMGB1P32-201ENST00000425971 MMP16P51512 607 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms