RNA–Protein interactions for RNA: ENST00000425393.1

RAB3GAP1-202, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 2 BASIC

Gene RAB3GAP1, Length 1,139 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-202ENST00000425393 HOXA2O43364 376 aa12.22□□□□□ -0.45
RAB3GAP1-202ENST00000425393 BARGINQ6ZT62 677 aa12.22□□□□□ -0.45
RAB3GAP1-202ENST00000425393 ZC3H15Q8WU90 426 aaKnown RBP12.22□□□□□ -0.45
RAB3GAP1-202ENST00000425393 REPIN1Q9BWE0 567 aaKnown RBP12.22□□□□□ -0.45
RAB3GAP1-202ENST00000425393 RPIAP49247 311 aa12.2□□□□□ -0.46
RAB3GAP1-202ENST00000425393 KRI1Q8N9T8 703 aaKnown RBP12.2□□□□□ -0.46
RAB3GAP1-202ENST00000425393 MMP16P51512 607 aa12.18□□□□□ -0.46
RAB3GAP1-202ENST00000425393 USB1Q9BQ65 265 aaKnown RBP12.18□□□□□ -0.46
RAB3GAP1-202ENST00000425393 GUCA2AQ02747 115 aa12.17□□□□□ -0.46
RAB3GAP1-202ENST00000425393 PKD2L1Q9P0L9 805 aa12.17□□□□□ -0.46
RAB3GAP1-202ENST00000425393 FAM187AA6NFU0 413 aa12.15□□□□□ -0.46
RAB3GAP1-202ENST00000425393 MYT1Q01538 1121 aa12.15□□□□□ -0.46
RAB3GAP1-202ENST00000425393 AMHR2Q16671 573 aa12.15□□□□□ -0.46
RAB3GAP1-202ENST00000425393 DXOO77932 396 aaKnown RBP12.14□□□□□ -0.47
RAB3GAP1-202ENST00000425393 FOXC1Q12948 553 aa12.14□□□□□ -0.47
RAB3GAP1-202ENST00000425393 TTLL12Q14166 644 aaPredicted RBP12.14□□□□□ -0.47
RAB3GAP1-202ENST00000425393 NUTM1Q86Y26 1132 aa12.14□□□□□ -0.47
RAB3GAP1-202ENST00000425393 CD2BP2O95400 341 aaKnown RBP12.13□□□□□ -0.47
RAB3GAP1-202ENST00000425393 SSTR3P32745 418 aaPredicted RBP12.13□□□□□ -0.47
RAB3GAP1-202ENST00000425393 ZBTB24O43167 697 aaPredicted RBP12.11□□□□□ -0.47
RAB3GAP1-202ENST00000425393 GIGYF2Q6Y7W6 1299 aaKnown RBP12.1□□□□□ -0.47
RAB3GAP1-202ENST00000425393 SYMPKQ92797 1274 aaKnown RBP12.1□□□□□ -0.47
RAB3GAP1-202ENST00000425393 ZNF775Q96BV0 537 aaPredicted RBP12.09□□□□□ -0.47
RAB3GAP1-202ENST00000425393 TRIM32Q13049 653 aa12.08□□□□□ -0.48
RAB3GAP1-202ENST00000425393 SPIRE2Q8WWL2 714 aa12.08□□□□□ -0.48
RAB3GAP1-202ENST00000425393 FDX1P10109 184 aa12.07□□□□□ -0.48
RAB3GAP1-202ENST00000425393 PCDHGC3Q9UN70 934 aa12.07□□□□□ -0.48
RAB3GAP1-202ENST00000425393 RETREG3Q86VR2 466 aa12.06□□□□□ -0.48
RAB3GAP1-202ENST00000425393 TOR4AQ9NXH8 423 aa12.06□□□□□ -0.48
RAB3GAP1-202ENST00000425393 JUNDP17535 347 aa12.05□□□□□ -0.48
RAB3GAP1-202ENST00000425393 PARP9Q8IXQ6 854 aa12.05□□□□□ -0.48
RAB3GAP1-202ENST00000425393 MOXD2PA6NHM9 499 aa12.03□□□□□ -0.48
RAB3GAP1-202ENST00000425393 TRIM66O15016 1216 aa12.03□□□□□ -0.48
RAB3GAP1-202ENST00000425393 CCDC24Q8N4L8 307 aa12.03□□□□□ -0.48
RAB3GAP1-202ENST00000425393 WNT7AO00755 349 aa12.02□□□□□ -0.49
RAB3GAP1-202ENST00000425393 NDUFV2P19404 249 aa12.02□□□□□ -0.49
RAB3GAP1-202ENST00000425393 CYP4X1Q8N118 509 aa12.02□□□□□ -0.49
RAB3GAP1-202ENST00000425393 C6orf229H3BNL8 230 aa12.01□□□□□ -0.49
RAB3GAP1-202ENST00000425393 BEGAINQ9BUH8 593 aa12.01□□□□□ -0.49
RAB3GAP1-202ENST00000425393 ST8SIA5O15466 376 aa12□□□□□ -0.49
RAB3GAP1-202ENST00000425393 AK7Q96M32 723 aa12□□□□□ -0.49
RAB3GAP1-202ENST00000425393 AAASQ9NRG9 546 aa12□□□□□ -0.49
RAB3GAP1-202ENST00000425393 MS4A1P11836 297 aa11.99□□□□□ -0.49
RAB3GAP1-202ENST00000425393 AVPP01185 164 aa11.98□□□□□ -0.49
RAB3GAP1-202ENST00000425393 NUDT12Q9BQG2 462 aa11.98□□□□□ -0.49
RAB3GAP1-202ENST00000425393 SKOR1P84550 965 aa11.97□□□□□ -0.49
RAB3GAP1-202ENST00000425393 CRIPAKQ8N1N5 446 aa11.97□□□□□ -0.49
RAB3GAP1-202ENST00000425393 MRGPRX2Q96LB1 330 aa11.97□□□□□ -0.49
RAB3GAP1-202ENST00000425393 TTC24A2A3L6 582 aaPredicted RBP11.96□□□□□ -0.49
RAB3GAP1-202ENST00000425393 TBC1D2Q9BYX2 928 aa11.96□□□□□ -0.49
RAB3GAP1-202ENST00000425393 POTECB2RU33 542 aa11.95□□□□□ -0.5
RAB3GAP1-202ENST00000425393 WNT7BP56706 349 aa11.94□□□□□ -0.5
RAB3GAP1-202ENST00000425393 MTMR2Q13614 643 aa11.94□□□□□ -0.5
RAB3GAP1-202ENST00000425393 CTC1Q2NKJ3 1217 aa11.94□□□□□ -0.5
RAB3GAP1-202ENST00000425393 PTCRAQ6ISU1 281 aaPredicted RBP11.94□□□□□ -0.5
RAB3GAP1-202ENST00000425393 SNIP1Q8TAD8 396 aaKnown RBP11.94□□□□□ -0.5
RAB3GAP1-202ENST00000425393 CCNYL3P0C7X3 344 aa11.93□□□□□ -0.5
RAB3GAP1-202ENST00000425393 GJA5P36382 358 aa11.93□□□□□ -0.5
RAB3GAP1-202ENST00000425393 RSBN1LQ6PCB5 846 aaPredicted RBP11.93□□□□□ -0.5
RAB3GAP1-202ENST00000425393 PRR7Q8TB68 274 aa11.93□□□□□ -0.5
RAB3GAP1-202ENST00000425393 AXIN1O15169 862 aa11.92□□□□□ -0.5
RAB3GAP1-202ENST00000425393 SMPD1P17405 629 aa11.92□□□□□ -0.5
RAB3GAP1-202ENST00000425393 DIXDC1Q155Q3 683 aa11.92□□□□□ -0.5
RAB3GAP1-202ENST00000425393 PTPRNQ16849 979 aa11.92□□□□□ -0.5
RAB3GAP1-202ENST00000425393 RC3H1Q5TC82 1133 aaKnown RBP11.92□□□□□ -0.5
RAB3GAP1-202ENST00000425393 PDE4DQ08499 809 aa11.91□□□□□ -0.5
RAB3GAP1-202ENST00000425393 SLC24A3Q9HC58 644 aa11.91□□□□□ -0.5
RAB3GAP1-202ENST00000425393 SPDYE5A6NIY4 337 aa11.9□□□□□ -0.5
RAB3GAP1-202ENST00000425393 J3QL48 77 aa11.9□□□□□ -0.5
RAB3GAP1-202ENST00000425393 SMCPP49901 116 aaPredicted RBP11.89□□□□□ -0.51
RAB3GAP1-202ENST00000425393 DESI1Q6ICB0 168 aa11.89□□□□□ -0.51
RAB3GAP1-202ENST00000425393 DACH1Q9UI36 760 aa11.89□□□□□ -0.51
RAB3GAP1-202ENST00000425393 SPTLC1O15269 473 aa11.88□□□□□ -0.51
RAB3GAP1-202ENST00000425393 PCDHB15Q9Y5E8 787 aa11.88□□□□□ -0.51
RAB3GAP1-202ENST00000425393 TREML4Q6UXN2 200 aa11.86□□□□□ -0.51
RAB3GAP1-202ENST00000425393 UNC93B1Q9H1C4 597 aa11.86□□□□□ -0.51
RAB3GAP1-202ENST00000425393 EVA1BQ9NVM1 165 aa11.86□□□□□ -0.51
RAB3GAP1-202ENST00000425393 C11orf95C9JLR9 678 aaPredicted RBP11.84□□□□□ -0.51
RAB3GAP1-202ENST00000425393 CFAP99D6REC4 459 aa11.84□□□□□ -0.51
RAB3GAP1-202ENST00000425393 HRCP23327 699 aa11.84□□□□□ -0.51
RAB3GAP1-202ENST00000425393 RIC3Q7Z5B4 369 aa11.84□□□□□ -0.51
RAB3GAP1-202ENST00000425393 ZBTB3Q9H5J0 574 aa11.84□□□□□ -0.51
RAB3GAP1-202ENST00000425393 SH3BP2P78314 561 aa11.83□□□□□ -0.52
RAB3GAP1-202ENST00000425393 KCNH2Q12809 1159 aa11.83□□□□□ -0.52
RAB3GAP1-202ENST00000425393 EHBP1Q8NDI1 1231 aa11.83□□□□□ -0.52
RAB3GAP1-202ENST00000425393 HPS1Q92902 700 aa11.83□□□□□ -0.52
RAB3GAP1-202ENST00000425393 PRPF38BQ5VTL8 546 aaKnown RBP11.82□□□□□ -0.52
RAB3GAP1-202ENST00000425393 MYSM1Q5VVJ2 828 aa11.82□□□□□ -0.52
RAB3GAP1-202ENST00000425393 GMPR2Q9P2T1 348 aaKnown RBP11.82□□□□□ -0.52
RAB3GAP1-202ENST00000425393 SIAH2O43255 324 aa11.81□□□□□ -0.52
RAB3GAP1-202ENST00000425393 LINC01559Q495D7 138 aa11.81□□□□□ -0.52
RAB3GAP1-202ENST00000425393 CABLES1Q8TDN4 633 aa11.81□□□□□ -0.52
RAB3GAP1-202ENST00000425393 LIMD1Q9UGP4 676 aa11.81□□□□□ -0.52
RAB3GAP1-202ENST00000425393 ALDH1A1P00352 501 aa11.8□□□□□ -0.52
RAB3GAP1-202ENST00000425393 CSPP1Q1MSJ5 1256 aa11.8□□□□□ -0.52
RAB3GAP1-202ENST00000425393 LYPD8Q6UX82 237 aa11.8□□□□□ -0.52
RAB3GAP1-202ENST00000425393 BAP1Q92560 729 aa11.8□□□□□ -0.52
RAB3GAP1-202ENST00000425393 ZNF511Q8NB15 262 aa11.78□□□□□ -0.52
RAB3GAP1-202ENST00000425393 QPCTQ16769 361 aa11.77□□□□□ -0.53
RAB3GAP1-202ENST00000425393 ATP13A2Q9NQ11 1180 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms