RNA–Protein interactions for RNA: ENST00000424544.2

DDR1-234, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-234ENST00000424544 SIRT1Q96EB6 747 aa23.95■■□□□ 1.42
DDR1-234ENST00000424544 NRXN1Q9ULB1 1477 aa23.94■■□□□ 1.42
DDR1-234ENST00000424544 PNPLA6Q8IY17 1366 aa23.93■■□□□ 1.42
DDR1-234ENST00000424544 NUTM2BA6NNL0 878 aaPredicted RBP23.92■■□□□ 1.42
DDR1-234ENST00000424544 NUTM2EB1AL46 878 aaPredicted RBP23.92■■□□□ 1.42
DDR1-234ENST00000424544 MEX3CQ5U5Q3 659 aaKnown RBP23.92■■□□□ 1.42
DDR1-234ENST00000424544 NUTM2AQ8IVF1 878 aaPredicted RBP23.92■■□□□ 1.42
DDR1-234ENST00000424544 STK26Q9P289 416 aa23.92■■□□□ 1.42
DDR1-234ENST00000424544 PLEKHH1Q9ULM0 1364 aa23.9■■□□□ 1.42
DDR1-234ENST00000424544 YTHDC2Q9H6S0 1430 aaKnown RBP23.89■■□□□ 1.41
DDR1-234ENST00000424544 CDC42BPGQ6DT37 1551 aa23.88■■□□□ 1.41
DDR1-234ENST00000424544 CFAP70Q5T0N1 1121 aa23.88■■□□□ 1.41
DDR1-234ENST00000424544 MYOM2P54296 1465 aa23.87■■□□□ 1.41
DDR1-234ENST00000424544 ESCO1Q5FWF5 840 aa23.86■■□□□ 1.41
DDR1-234ENST00000424544 KNDC1Q76NI1 1749 aa23.85■■□□□ 1.41
DDR1-234ENST00000424544 AFF2P51816 1311 aa23.84■■□□□ 1.41
DDR1-234ENST00000424544 NPHP3Q7Z494 1330 aa23.83■■□□□ 1.4
DDR1-234ENST00000424544 RXRBP28702 533 aa23.82■■□□□ 1.4
DDR1-234ENST00000424544 DHX57Q6P158 1386 aaKnown RBP23.81■■□□□ 1.4
DDR1-234ENST00000424544 FOXO3O43524 673 aa23.81■■□□□ 1.4
DDR1-234ENST00000424544 PXDNQ92626 1479 aa23.8■■□□□ 1.4
DDR1-234ENST00000424544 STAC3Q96MF2 364 aa23.79■■□□□ 1.4
DDR1-234ENST00000424544 C8orf37Q96NL8 207 aa23.78■■□□□ 1.4
DDR1-234ENST00000424544 CDK12Q9NYV4 1490 aaPredicted RBP23.78■■□□□ 1.4
DDR1-234ENST00000424544 NUTM2FA1L443 756 aa23.77■■□□□ 1.4
DDR1-234ENST00000424544 FNBP4Q8N3X1 1017 aaPredicted RBP23.77■■□□□ 1.4
DDR1-234ENST00000424544 QTRT2Q9H974 415 aaKnown RBP23.77■■□□□ 1.4
DDR1-234ENST00000424544 ADAMTS2O95450 1211 aa23.76■■□□□ 1.39
DDR1-234ENST00000424544 COL22A1Q8NFW1 1626 aaPredicted RBP23.75■■□□□ 1.39
DDR1-234ENST00000424544 NGLY1Q96IV0 654 aa23.75■■□□□ 1.39
DDR1-234ENST00000424544 ADGRB1O14514 1584 aa23.74■■□□□ 1.39
DDR1-234ENST00000424544 RBM6P78332 1123 aaKnown RBP23.74■■□□□ 1.39
DDR1-234ENST00000424544 PRAM1Q96QH2 718 aa23.74■■□□□ 1.39
DDR1-234ENST00000424544 FMN2Q9NZ56 1722 aa23.73■■□□□ 1.39
DDR1-234ENST00000424544 XPCQ01831 940 aaPredicted RBP23.73■■□□□ 1.39
DDR1-234ENST00000424544 DLC1Q96QB1 1528 aa23.73■■□□□ 1.39
DDR1-234ENST00000424544 DCAF11Q8TEB1 546 aa23.72■■□□□ 1.39
DDR1-234ENST00000424544 UPF1Q92900 1129 aaKnown RBP eCLIP23.72■■□□□ 1.39
DDR1-234ENST00000424544 SPATA31A3Q5VYP0 1347 aa23.7■■□□□ 1.38
DDR1-234ENST00000424544 KDM2AQ9Y2K7 1162 aa23.7■■□□□ 1.38
DDR1-234ENST00000424544 KRT28Q7Z3Y7 464 aa23.68■■□□□ 1.38
DDR1-234ENST00000424544 USP21Q9UK80 565 aa23.68■■□□□ 1.38
DDR1-234ENST00000424544 PHF8Q9UPP1 1060 aa23.68■■□□□ 1.38
DDR1-234ENST00000424544 SAFB2Q14151 953 aaKnown RBP eCLIP23.66■■□□□ 1.38
DDR1-234ENST00000424544 POGKQ9P215 609 aa23.66■■□□□ 1.38
DDR1-234ENST00000424544 TRAK1Q9UPV9 953 aa23.65■■□□□ 1.38
DDR1-234ENST00000424544 RGPD8O14715 1765 aaPredicted RBP23.65■■□□□ 1.38
DDR1-234ENST00000424544 KIF1AQ12756 1690 aa23.64■■□□□ 1.38
DDR1-234ENST00000424544 BCL9LQ86UU0 1499 aa23.64■■□□□ 1.38
DDR1-234ENST00000424544 TRPC5Q9UL62 973 aaPredicted RBP23.64■■□□□ 1.37
DDR1-234ENST00000424544 RGS12O14924 1447 aa23.63■■□□□ 1.37
DDR1-234ENST00000424544 ATRNO75882 1429 aa23.62■■□□□ 1.37
DDR1-234ENST00000424544 ADGRB2O60241 1585 aa23.61■■□□□ 1.37
DDR1-234ENST00000424544 ANKARQ7Z5J8 1434 aa23.61■■□□□ 1.37
DDR1-234ENST00000424544 PSME1Q06323 249 aa23.61■■□□□ 1.37
DDR1-234ENST00000424544 TRIM26Q12899 539 aaPredicted RBP23.61■■□□□ 1.37
DDR1-234ENST00000424544 SBNO1A3KN83 1393 aa23.61■■□□□ 1.37
DDR1-234ENST00000424544 USP32Q8NFA0 1604 aa23.59■■□□□ 1.37
DDR1-234ENST00000424544 PRR36Q9H6K5 1346 aa23.59■■□□□ 1.37
DDR1-234ENST00000424544 WASLO00401 505 aaPredicted RBP23.58■■□□□ 1.37
DDR1-234ENST00000424544 MARF1Q9Y4F3 1742 aaKnown RBP23.57■■□□□ 1.36
DDR1-234ENST00000424544 HIRIP3Q9BW71 556 aaPredicted RBP23.57■■□□□ 1.36
DDR1-234ENST00000424544 SLIT2O94813 1529 aa23.56■■□□□ 1.36
DDR1-234ENST00000424544 PMFBP1Q8TBY8 1022 aa23.56■■□□□ 1.36
DDR1-234ENST00000424544 TNS3Q68CZ2 1445 aa23.56■■□□□ 1.36
DDR1-234ENST00000424544 MINK1Q8N4C8 1332 aaPredicted RBP23.56■■□□□ 1.36
DDR1-234ENST00000424544 UNC5CLQ8IV45 518 aa23.53■■□□□ 1.36
DDR1-234ENST00000424544 GJD4Q96KN9 370 aaPredicted RBP23.53■■□□□ 1.36
DDR1-234ENST00000424544 CABLES1Q8TDN4 633 aa23.52■■□□□ 1.36
DDR1-234ENST00000424544 ARHGEF10O15013 1369 aa23.51■■□□□ 1.35
DDR1-234ENST00000424544 EIF3AQ14152 1382 aaKnown RBP23.51■■□□□ 1.35
DDR1-234ENST00000424544 TULP4Q9NRJ4 1543 aa23.5■■□□□ 1.35
DDR1-234ENST00000424544 NBPF1Q3BBV0 1214 aa23.49■■□□□ 1.35
DDR1-234ENST00000424544 EP400Q96L91 3159 aa23.47■■□□□ 1.35
DDR1-234ENST00000424544 NUDT16Q96DE0 195 aaKnown RBP23.47■■□□□ 1.35
DDR1-234ENST00000424544 ARHGEF28Q8N1W1 1705 aaKnown RBP23.47■■□□□ 1.35
DDR1-234ENST00000424544 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.47■■□□□ 1.35
DDR1-234ENST00000424544 FAM83GA6ND36 823 aa23.46■■□□□ 1.35
DDR1-234ENST00000424544 TRPM3Q9HCF6 1732 aaPredicted RBP23.46■■□□□ 1.35
DDR1-234ENST00000424544 KIAA1210Q9ULL0 1709 aa23.46■■□□□ 1.35
DDR1-234ENST00000424544 GPRASP1Q5JY77 1395 aa23.44■■□□□ 1.34
DDR1-234ENST00000424544 ATAD2Q6PL18 1390 aa23.44■■□□□ 1.34
DDR1-234ENST00000424544 ONECUT3O60422 494 aaPredicted RBP23.44■■□□□ 1.34
DDR1-234ENST00000424544 LMOD2Q6P5Q4 547 aa23.44■■□□□ 1.34
DDR1-234ENST00000424544 CDK19Q9BWU1 502 aa23.44■■□□□ 1.34
DDR1-234ENST00000424544 VPS72Q15906 364 aa23.43■■□□□ 1.34
DDR1-234ENST00000424544 ATP7BP35670 1465 aa23.43■■□□□ 1.34
DDR1-234ENST00000424544 RALGAPBQ86X10 1494 aa23.43■■□□□ 1.34
DDR1-234ENST00000424544 NGDNQ8NEJ9 315 aaKnown RBP23.42■■□□□ 1.34
DDR1-234ENST00000424544 GLI3P10071 1580 aa23.42■■□□□ 1.34
DDR1-234ENST00000424544 ALS2Q96Q42 1657 aa23.41■■□□□ 1.34
DDR1-234ENST00000424544 L3MBTL2Q969R5 705 aa23.41■■□□□ 1.34
DDR1-234ENST00000424544 PLEKHG3A1L390 1219 aa23.4■■□□□ 1.34
DDR1-234ENST00000424544 HAP1P54257 671 aaPredicted RBP23.4■■□□□ 1.34
DDR1-234ENST00000424544 CCDC61Q9Y6R9 512 aa23.4■■□□□ 1.34
DDR1-234ENST00000424544 ABCA3Q99758 1704 aa23.39■■□□□ 1.34
DDR1-234ENST00000424544 SIN3AQ96ST3 1273 aa23.38■■□□□ 1.33
DDR1-234ENST00000424544 PCGF6Q9BYE7 350 aa23.38■■□□□ 1.33
DDR1-234ENST00000424544 POLR3AO14802 1390 aaPredicted RBP23.38■■□□□ 1.33
DDR1-234ENST00000424544 NWD2Q9ULI1 1742 aa23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms