RNA–Protein interactions for RNA: ENST00000424089.5

POLR1A-204, Transcript of RNA polymerase I subunit A, human

TSL 3

Gene POLR1A, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLR1A-204	ENST00000424089		E9PCH4	1651 aa		13.92	□□□□□ -0.18
POLR1A-204	ENST00000424089	ASXL1	Q8IXJ9	1541 aa		13.92	□□□□□ -0.18
POLR1A-204	ENST00000424089	C8orf37	Q96NL8	207 aa		13.92	□□□□□ -0.18
POLR1A-204	ENST00000424089	NHSL1	Q5SYE7	1610 aa		13.92	□□□□□ -0.18
POLR1A-204	ENST00000424089	LRRC59	Q96AG4	307 aa	Known RBP	13.91	□□□□□ -0.18
POLR1A-204	ENST00000424089	CCDC7	Q96M83	1385 aa		13.91	□□□□□ -0.18
POLR1A-204	ENST00000424089	RGS12	O14924	1447 aa		13.9	□□□□□ -0.18
POLR1A-204	ENST00000424089	ATAD2	Q6PL18	1390 aa		13.89	□□□□□ -0.19
POLR1A-204	ENST00000424089	DCAF11	Q8TEB1	546 aa		13.89	□□□□□ -0.19
POLR1A-204	ENST00000424089	NGLY1	Q96IV0	654 aa		13.89	□□□□□ -0.19
POLR1A-204	ENST00000424089	USP47	Q96K76	1375 aa		13.88	□□□□□ -0.19
POLR1A-204	ENST00000424089	XRN1	Q8IZH2	1706 aa	Known RBP	13.88	□□□□□ -0.19
POLR1A-204	ENST00000424089	MST1R	Q04912	1400 aa		13.87	□□□□□ -0.19
POLR1A-204	ENST00000424089	PTPRU	Q92729	1446 aa		13.87	□□□□□ -0.19
POLR1A-204	ENST00000424089	ROCK2	O75116	1388 aa	Known RBP	13.86	□□□□□ -0.19
POLR1A-204	ENST00000424089	CARD11	Q9BXL7	1154 aa		13.86	□□□□□ -0.19
POLR1A-204	ENST00000424089	SETBP1	Q9Y6X0	1596 aa		13.85	□□□□□ -0.19
POLR1A-204	ENST00000424089	PRAG1	Q86YV5	1406 aa		13.85	□□□□□ -0.19
POLR1A-204	ENST00000424089	ZNF326	Q5BKZ1	582 aa	Known RBP	13.85	□□□□□ -0.19
POLR1A-204	ENST00000424089	KIF7	Q2M1P5	1343 aa		13.85	□□□□□ -0.19
POLR1A-204	ENST00000424089	GPRASP1	Q5JY77	1395 aa		13.84	□□□□□ -0.19
POLR1A-204	ENST00000424089	PNPLA6	Q8IY17	1366 aa		13.84	□□□□□ -0.19
POLR1A-204	ENST00000424089	NRXN3	Q9Y4C0	1643 aa		13.84	□□□□□ -0.19
POLR1A-204	ENST00000424089	ADAMTS2	O95450	1211 aa		13.84	□□□□□ -0.19
POLR1A-204	ENST00000424089	ADGRL3	Q9HAR2	1447 aa		13.83	□□□□□ -0.2
POLR1A-204	ENST00000424089	C11orf95	C9JLR9	678 aa	Predicted RBP	13.83	□□□□□ -0.2
POLR1A-204	ENST00000424089	KDM2A	Q9Y2K7	1162 aa		13.83	□□□□□ -0.2
POLR1A-204	ENST00000424089	GTF3C3	Q9Y5Q9	886 aa		13.83	□□□□□ -0.2
POLR1A-204	ENST00000424089	SPHKAP	Q2M3C7	1700 aa		13.83	□□□□□ -0.2
POLR1A-204	ENST00000424089	NALCN	Q8IZF0	1738 aa		13.82	□□□□□ -0.2
POLR1A-204	ENST00000424089	CCDC125	Q86Z20	511 aa		13.8	□□□□□ -0.2
POLR1A-204	ENST00000424089	TRPC5	Q9UL62	973 aa	Predicted RBP	13.8	□□□□□ -0.2
POLR1A-204	ENST00000424089	LAMC1	P11047	1609 aa		13.79	□□□□□ -0.2
POLR1A-204	ENST00000424089	RGL3	Q3MIN7	710 aa		13.79	□□□□□ -0.2
POLR1A-204	ENST00000424089	DDX17	Q92841	729 aa	Known RBP	13.79	□□□□□ -0.2
POLR1A-204	ENST00000424089	USP21	Q9UK80	565 aa		13.79	□□□□□ -0.2
POLR1A-204	ENST00000424089	MET	P08581	1390 aa		13.79	□□□□□ -0.2
POLR1A-204	ENST00000424089	C1orf167	Q5SNV9	1468 aa		13.78	□□□□□ -0.2
POLR1A-204	ENST00000424089	KIF1B	O60333	1816 aa		13.77	□□□□□ -0.21
POLR1A-204	ENST00000424089	PTCH1	Q13635	1447 aa		13.77	□□□□□ -0.21
POLR1A-204	ENST00000424089	PRKRIP1	Q9H875	184 aa	Predicted RBP	13.77	□□□□□ -0.21
POLR1A-204	ENST00000424089	TRPM1	Q7Z4N2	1603 aa		13.76	□□□□□ -0.21
POLR1A-204	ENST00000424089	ST20-MTHFS	A0A0A6YYL1	179 aa		13.76	□□□□□ -0.21
POLR1A-204	ENST00000424089	SLC24A1	O60721	1099 aa		13.75	□□□□□ -0.21
POLR1A-204	ENST00000424089	KTN1	Q86UP2	1357 aa	Known RBP	13.74	□□□□□ -0.21
POLR1A-204	ENST00000424089	SOS2	Q07890	1332 aa	Predicted RBP	13.74	□□□□□ -0.21
POLR1A-204	ENST00000424089	COL22A1	Q8NFW1	1626 aa	Predicted RBP	13.74	□□□□□ -0.21
POLR1A-204	ENST00000424089	NEXMIF	Q5QGS0	1516 aa		13.74	□□□□□ -0.21
POLR1A-204	ENST00000424089	FNBP4	Q8N3X1	1017 aa	Predicted RBP	13.73	□□□□□ -0.21
POLR1A-204	ENST00000424089	MARF1	Q9Y4F3	1742 aa	Known RBP	13.73	□□□□□ -0.21
POLR1A-204	ENST00000424089	ATRN	O75882	1429 aa		13.73	□□□□□ -0.21
POLR1A-204	ENST00000424089	CLTCL1	P53675	1640 aa		13.72	□□□□□ -0.21
POLR1A-204	ENST00000424089	ORAI2	Q96SN7	254 aa		13.71	□□□□□ -0.21
POLR1A-204	ENST00000424089	VGF	O15240	615 aa	Predicted RBP	13.7	□□□□□ -0.22
POLR1A-204	ENST00000424089	SF3B2	Q13435	895 aa	Known RBP	13.7	□□□□□ -0.22
POLR1A-204	ENST00000424089	NBPF1	Q3BBV0	1214 aa		13.7	□□□□□ -0.22
POLR1A-204	ENST00000424089	NPHP3	Q7Z494	1330 aa		13.69	□□□□□ -0.22
POLR1A-204	ENST00000424089	MYOM2	P54296	1465 aa		13.69	□□□□□ -0.22
POLR1A-204	ENST00000424089	EP400	Q96L91	3159 aa		13.69	□□□□□ -0.22
POLR1A-204	ENST00000424089	RPGRIP1L	Q68CZ1	1315 aa		13.68	□□□□□ -0.22
POLR1A-204	ENST00000424089	TMF1	P82094	1093 aa		13.68	□□□□□ -0.22
POLR1A-204	ENST00000424089	CDCA8	Q53HL2	280 aa		13.68	□□□□□ -0.22
POLR1A-204	ENST00000424089	ROBO2	Q9HCK4	1378 aa		13.68	□□□□□ -0.22
POLR1A-204	ENST00000424089	RALBP1	Q15311	655 aa		13.67	□□□□□ -0.22
POLR1A-204	ENST00000424089	DEFB132	Q7Z7B7	95 aa		13.67	□□□□□ -0.22
POLR1A-204	ENST00000424089	LRPPRC	P42704	1394 aa	Known RBP	13.67	□□□□□ -0.22
POLR1A-204	ENST00000424089	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	13.67	□□□□□ -0.22
POLR1A-204	ENST00000424089	ESCO1	Q5FWF5	840 aa		13.66	□□□□□ -0.22
POLR1A-204	ENST00000424089	GJD4	Q96KN9	370 aa	Predicted RBP	13.66	□□□□□ -0.22
POLR1A-204	ENST00000424089	TESK2	Q96S53	571 aa		13.66	□□□□□ -0.22
POLR1A-204	ENST00000424089	EIF3A	Q14152	1382 aa	Known RBP	13.66	□□□□□ -0.22
POLR1A-204	ENST00000424089	CDC42BPG	Q6DT37	1551 aa		13.66	□□□□□ -0.22
POLR1A-204	ENST00000424089	BLM	P54132	1417 aa	Predicted RBP	13.65	□□□□□ -0.22
POLR1A-204	ENST00000424089	KIAA1210	Q9ULL0	1709 aa		13.65	□□□□□ -0.22
POLR1A-204	ENST00000424089	MRS2	Q9HD23	443 aa		13.65	□□□□□ -0.22
POLR1A-204	ENST00000424089	BCL9L	Q86UU0	1499 aa		13.65	□□□□□ -0.22
POLR1A-204	ENST00000424089	PSD	A5PKW4	1024 aa	Predicted RBP	13.64	□□□□□ -0.23
POLR1A-204	ENST00000424089	POLR3GL	Q9BT43	218 aa		13.64	□□□□□ -0.23
POLR1A-204	ENST00000424089	PPL	O60437	1756 aa		13.63	□□□□□ -0.23
POLR1A-204	ENST00000424089	PXDN	Q92626	1479 aa		13.63	□□□□□ -0.23
POLR1A-204	ENST00000424089	NRXN1	Q9ULB1	1477 aa		13.63	□□□□□ -0.23
POLR1A-204	ENST00000424089	FOXO3	O43524	673 aa		13.61	□□□□□ -0.23
POLR1A-204	ENST00000424089	UNC5CL	Q8IV45	518 aa		13.61	□□□□□ -0.23
POLR1A-204	ENST00000424089	LRP5	O75197	1615 aa		13.61	□□□□□ -0.23
POLR1A-204	ENST00000424089	BRWD3	Q6RI45	1802 aa		13.6	□□□□□ -0.23
POLR1A-204	ENST00000424089	XPC	Q01831	940 aa	Predicted RBP	13.6	□□□□□ -0.23
POLR1A-204	ENST00000424089	KIF1A	Q12756	1690 aa		13.59	□□□□□ -0.23
POLR1A-204	ENST00000424089	GLI3	P10071	1580 aa		13.59	□□□□□ -0.23
POLR1A-204	ENST00000424089	HAP1	P54257	671 aa	Predicted RBP	13.59	□□□□□ -0.23
POLR1A-204	ENST00000424089	HNRNPU	Q00839	825 aa	Known RBP eCLIP	13.59	□□□□□ -0.23
POLR1A-204	ENST00000424089	MYBBP1A	Q9BQG0	1328 aa	Known RBP	13.59	□□□□□ -0.23
POLR1A-204	ENST00000424089	BRD4	O60885	1362 aa	Predicted RBP	13.58	□□□□□ -0.23
POLR1A-204	ENST00000424089	PER1	O15534	1290 aa	Predicted RBP	13.58	□□□□□ -0.24
POLR1A-204	ENST00000424089	YY1	P25490	414 aa		13.58	□□□□□ -0.24
POLR1A-204	ENST00000424089	SLIT2	O94813	1529 aa		13.58	□□□□□ -0.24
POLR1A-204	ENST00000424089	USP32	Q8NFA0	1604 aa		13.57	□□□□□ -0.24
POLR1A-204	ENST00000424089	ADGRF5	Q8IZF2	1346 aa		13.57	□□□□□ -0.24
POLR1A-204	ENST00000424089	NUTM2F	A1L443	756 aa		13.56	□□□□□ -0.24
POLR1A-204	ENST00000424089	BAG6	P46379	1132 aa		13.56	□□□□□ -0.24
POLR1A-204	ENST00000424089	CCDC184	Q52MB2	194 aa		13.56	□□□□□ -0.24

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