RNA–Protein interactions for RNA: ENST00000423701.6

SEC22C-207, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 1 (best) BASIC

Gene SEC22C, Length 1,458 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-207ENST00000423701 PRAM1Q96QH2 718 aa30.98■■■□□ 2.55
SEC22C-207ENST00000423701 GPRASP1Q5JY77 1395 aa30.96■■■□□ 2.55
SEC22C-207ENST00000423701 CDC42BPGQ6DT37 1551 aa30.94■■■□□ 2.54
SEC22C-207ENST00000423701 ATF3P18847 181 aa30.93■■■□□ 2.54
SEC22C-207ENST00000423701 CADPS2Q86UW7 1296 aa30.93■■■□□ 2.54
SEC22C-207ENST00000423701 POGKQ9P215 609 aa30.93■■■□□ 2.54
SEC22C-207ENST00000423701 SAFB2Q14151 953 aaKnown RBP eCLIP30.92■■■□□ 2.54
SEC22C-207ENST00000423701 PIP4K2BP78356 416 aa30.9■■■□□ 2.54
SEC22C-207ENST00000423701 ADGRB2O60241 1585 aa30.88■■■□□ 2.53
SEC22C-207ENST00000423701 SCAF1Q9H7N4 1312 aaKnown RBP30.88■■■□□ 2.53
SEC22C-207ENST00000423701 MST1RQ04912 1400 aa30.87■■■□□ 2.53
SEC22C-207ENST00000423701 SLAIN2Q9P270 581 aa30.86■■■□□ 2.53
SEC22C-207ENST00000423701 ILDR1Q86SU0 546 aaPredicted RBP30.85■■■□□ 2.53
SEC22C-207ENST00000423701 CARD11Q9BXL7 1154 aa30.85■■■□□ 2.53
SEC22C-207ENST00000423701 ROBO1Q9Y6N7 1651 aa30.84■■■□□ 2.53
SEC22C-207ENST00000423701 FMN2Q9NZ56 1722 aa30.83■■■□□ 2.53
SEC22C-207ENST00000423701 QRICH2Q9H0J4 1663 aa30.82■■■□□ 2.52
SEC22C-207ENST00000423701 MINK1Q8N4C8 1332 aaPredicted RBP30.81■■■□□ 2.52
SEC22C-207ENST00000423701 EIF3AQ14152 1382 aaKnown RBP30.8■■■□□ 2.52
SEC22C-207ENST00000423701 CENPJQ9HC77 1338 aaPredicted RBP30.8■■■□□ 2.52
SEC22C-207ENST00000423701 HIRIP3Q9BW71 556 aaPredicted RBP30.79■■■□□ 2.52
SEC22C-207ENST00000423701 C1orf167Q5SNV9 1468 aa30.78■■■□□ 2.52
SEC22C-207ENST00000423701 NUTM2FA1L443 756 aa30.72■■■□□ 2.51
SEC22C-207ENST00000423701 BRINP3Q76B58 766 aa30.72■■■□□ 2.51
SEC22C-207ENST00000423701 USP32Q8NFA0 1604 aa30.71■■■□□ 2.51
SEC22C-207ENST00000423701 WASLO00401 505 aaPredicted RBP30.7■■■□□ 2.51
SEC22C-207ENST00000423701 TULP4Q9NRJ4 1543 aa30.69■■■□□ 2.5
SEC22C-207ENST00000423701 ANKARQ7Z5J8 1434 aa30.67■■■□□ 2.5
SEC22C-207ENST00000423701 RGPD8O14715 1765 aaPredicted RBP30.67■■■□□ 2.5
SEC22C-207ENST00000423701 ORAI2Q96SN7 254 aa30.67■■■□□ 2.5
SEC22C-207ENST00000423701 USP47Q96K76 1375 aa30.67■■■□□ 2.5
SEC22C-207ENST00000423701 HSPA1LP34931 641 aa30.66■■■□□ 2.5
SEC22C-207ENST00000423701 AHDC1Q5TGY3 1603 aaPredicted RBP30.66■■■□□ 2.5
SEC22C-207ENST00000423701 SBNO2Q9Y2G9 1366 aa30.65■■■□□ 2.5
SEC22C-207ENST00000423701 NHSL1Q5SYE7 1610 aa30.64■■■□□ 2.5
SEC22C-207ENST00000423701 ESCO1Q5FWF5 840 aa30.63■■■□□ 2.49
SEC22C-207ENST00000423701 PHLPP1O60346 1717 aa30.63■■■□□ 2.49
SEC22C-207ENST00000423701 ATP7BP35670 1465 aa30.63■■■□□ 2.49
SEC22C-207ENST00000423701 PRR36Q9H6K5 1346 aa30.63■■■□□ 2.49
SEC22C-207ENST00000423701 CDK19Q9BWU1 502 aa30.63■■■□□ 2.49
SEC22C-207ENST00000423701 KIF1AQ12756 1690 aa30.61■■■□□ 2.49
SEC22C-207ENST00000423701 ST20-MTHFSA0A0A6YYL1 179 aa30.6■■■□□ 2.49
SEC22C-207ENST00000423701 COL16A1Q07092 1604 aaPredicted RBP30.59■■■□□ 2.49
SEC22C-207ENST00000423701 ITSN1Q15811 1721 aa30.58■■■□□ 2.49
SEC22C-207ENST00000423701 EVC2Q86UK5 1308 aa30.58■■■□□ 2.49
SEC22C-207ENST00000423701 TOPAZ1Q8N9V7 1692 aa30.58■■■□□ 2.49
SEC22C-207ENST00000423701 SRPK2P78362 688 aaKnown RBP30.56■■■□□ 2.48
SEC22C-207ENST00000423701 DDX17Q92841 729 aaKnown RBP30.56■■■□□ 2.48
SEC22C-207ENST00000423701 NUDT16Q96DE0 195 aaKnown RBP30.55■■■□□ 2.48
SEC22C-207ENST00000423701 TESK2Q96S53 571 aa30.55■■■□□ 2.48
SEC22C-207ENST00000423701 CABP2Q9NPB3 220 aa30.54■■■□□ 2.48
SEC22C-207ENST00000423701 PHF8Q9UPP1 1060 aa30.54■■■□□ 2.48
SEC22C-207ENST00000423701 FOXO3O43524 673 aa30.5■■■□□ 2.47
SEC22C-207ENST00000423701 NPHP3Q7Z494 1330 aa30.5■■■□□ 2.47
SEC22C-207ENST00000423701 PMFBP1Q8TBY8 1022 aa30.49■■■□□ 2.47
SEC22C-207ENST00000423701 PXDNQ92626 1479 aa30.49■■■□□ 2.47
SEC22C-207ENST00000423701 CCDC61Q9Y6R9 512 aa30.48■■■□□ 2.47
SEC22C-207ENST00000423701 SOS2Q07890 1332 aaPredicted RBP30.47■■■□□ 2.47
SEC22C-207ENST00000423701 EIF4G2P78344 907 aaKnown RBP eCLIP30.46■■■□□ 2.47
SEC22C-207ENST00000423701 PPIP5K1Q6PFW1 1433 aa30.46■■■□□ 2.47
SEC22C-207ENST00000423701 XPCQ01831 940 aaPredicted RBP30.44■■■□□ 2.46
SEC22C-207ENST00000423701 ATAD2Q6PL18 1390 aa30.43■■■□□ 2.46
SEC22C-207ENST00000423701 SLC24A1O60721 1099 aa30.43■■■□□ 2.46
SEC22C-207ENST00000423701 HSPA5P11021 654 aaKnown RBP30.43■■■□□ 2.46
SEC22C-207ENST00000423701 DISP3Q9P2K9 1392 aa30.43■■■□□ 2.46
SEC22C-207ENST00000423701 PLEKHG3A1L390 1219 aa30.4■■■□□ 2.46
SEC22C-207ENST00000423701 SHPRHQ149N8 1683 aa30.4■■■□□ 2.46
SEC22C-207ENST00000423701 POLR3AO14802 1390 aaPredicted RBP30.39■■■□□ 2.46
SEC22C-207ENST00000423701 JCADQ9P266 1359 aa30.39■■■□□ 2.46
SEC22C-207ENST00000423701 TMF1P82094 1093 aa30.39■■■□□ 2.46
SEC22C-207ENST00000423701 NGDNQ8NEJ9 315 aaKnown RBP30.39■■■□□ 2.46
SEC22C-207ENST00000423701 LRRC59Q96AG4 307 aaKnown RBP30.38■■■□□ 2.45
SEC22C-207ENST00000423701 KRT28Q7Z3Y7 464 aa30.38■■■□□ 2.45
SEC22C-207ENST00000423701 CABP1Q9NZU7 370 aa30.38■■■□□ 2.45
SEC22C-207ENST00000423701 ACEP12821 1306 aa30.37■■■□□ 2.45
SEC22C-207ENST00000423701 TRPM3Q9HCF6 1732 aaPredicted RBP30.37■■■□□ 2.45
SEC22C-207ENST00000423701 PSME1Q06323 249 aa30.37■■■□□ 2.45
SEC22C-207ENST00000423701 PUS7Q96PZ0 661 aaKnown RBP30.37■■■□□ 2.45
SEC22C-207ENST00000423701 PNPLA6Q8IY17 1366 aa30.33■■■□□ 2.45
SEC22C-207ENST00000423701 SBNO1A3KN83 1393 aa30.32■■■□□ 2.44
SEC22C-207ENST00000423701 TNS3Q68CZ2 1445 aa30.32■■■□□ 2.44
SEC22C-207ENST00000423701 SPATA31A3Q5VYP0 1347 aa30.3■■■□□ 2.44
SEC22C-207ENST00000423701 AKAP12Q02952 1782 aa30.3■■■□□ 2.44
SEC22C-207ENST00000423701 COL22A1Q8NFW1 1626 aaPredicted RBP30.3■■■□□ 2.44
SEC22C-207ENST00000423701 ALS2Q96Q42 1657 aa30.28■■■□□ 2.44
SEC22C-207ENST00000423701 CDCA8Q53HL2 280 aa30.28■■■□□ 2.44
SEC22C-207ENST00000423701 TMC1Q8TDI8 760 aa30.27■■■□□ 2.44
SEC22C-207ENST00000423701 USP6P35125 1406 aa30.26■■■□□ 2.44
SEC22C-207ENST00000423701 CD163L1Q9NR16 1453 aa30.26■■■□□ 2.43
SEC22C-207ENST00000423701 NINLQ9Y2I6 1382 aa30.26■■■□□ 2.43
SEC22C-207ENST00000423701 CPSF1Q10570 1443 aaKnown RBP30.26■■■□□ 2.43
SEC22C-207ENST00000423701 SLC12A5Q9H2X9 1139 aa30.25■■■□□ 2.43
SEC22C-207ENST00000423701 SPATA31A6Q5VVP1 1343 aa30.25■■■□□ 2.43
SEC22C-207ENST00000423701 MED1Q15648 1581 aaPredicted RBP30.24■■■□□ 2.43
SEC22C-207ENST00000423701 MYOM1P52179 1685 aa30.24■■■□□ 2.43
SEC22C-207ENST00000423701 MON2Q7Z3U7 1717 aa30.24■■■□□ 2.43
SEC22C-207ENST00000423701 ZEB1P37275 1124 aaPredicted RBP30.23■■■□□ 2.43
SEC22C-207ENST00000423701 NRKQ7Z2Y5 1582 aa30.22■■■□□ 2.43
SEC22C-207ENST00000423701 LRP6O75581 1613 aa30.22■■■□□ 2.43
SEC22C-207ENST00000423701 PAK3O75914 559 aaPredicted RBP30.22■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms