RNA–Protein interactions for RNA: ENST00000422489.1

NUP50-206, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-206ENST00000422489 SAFB2Q14151 953 aaKnown RBP eCLIP13.58□□□□□ -0.24
NUP50-206ENST00000422489 ZNF772Q68DY9 489 aaPredicted RBP13.58□□□□□ -0.24
NUP50-206ENST00000422489 PPLO60437 1756 aa13.58□□□□□ -0.24
NUP50-206ENST00000422489 ABCC11Q96J66 1382 aa13.58□□□□□ -0.24
NUP50-206ENST00000422489 AHDC1Q5TGY3 1603 aaPredicted RBP13.57□□□□□ -0.24
NUP50-206ENST00000422489 POGKQ9P215 609 aa13.57□□□□□ -0.24
NUP50-206ENST00000422489 PLEKHH1Q9ULM0 1364 aa13.57□□□□□ -0.24
NUP50-206ENST00000422489 FOXO3O43524 673 aa13.56□□□□□ -0.24
NUP50-206ENST00000422489 ADAMTS2O95450 1211 aa13.56□□□□□ -0.24
NUP50-206ENST00000422489 XPCQ01831 940 aaPredicted RBP13.56□□□□□ -0.24
NUP50-206ENST00000422489 SIRT1Q96EB6 747 aa13.56□□□□□ -0.24
NUP50-206ENST00000422489 C8orf37Q96NL8 207 aa13.56□□□□□ -0.24
NUP50-206ENST00000422489 PIK3C2GO75747 1445 aa13.56□□□□□ -0.24
NUP50-206ENST00000422489 YTHDC2Q9H6S0 1430 aaKnown RBP13.56□□□□□ -0.24
NUP50-206ENST00000422489 LRP6O75581 1613 aa13.55□□□□□ -0.24
NUP50-206ENST00000422489 PRAM1Q96QH2 718 aa13.55□□□□□ -0.24
NUP50-206ENST00000422489 TRAK1Q9UPV9 953 aa13.55□□□□□ -0.24
NUP50-206ENST00000422489 NGLY1Q96IV0 654 aa13.54□□□□□ -0.24
NUP50-206ENST00000422489 SOS2Q07890 1332 aaPredicted RBP13.54□□□□□ -0.24
NUP50-206ENST00000422489 PRAG1Q86YV5 1406 aa13.54□□□□□ -0.24
NUP50-206ENST00000422489 NALCNQ8IZF0 1738 aa13.53□□□□□ -0.24
NUP50-206ENST00000422489 RXRBP28702 533 aa13.53□□□□□ -0.24
NUP50-206ENST00000422489 AFF2P51816 1311 aa13.53□□□□□ -0.24
NUP50-206ENST00000422489 PNPLA6Q8IY17 1366 aa13.53□□□□□ -0.24
NUP50-206ENST00000422489 SETD1AO15047 1707 aaKnown RBP13.53□□□□□ -0.24
NUP50-206ENST00000422489 NPHP3Q7Z494 1330 aa13.52□□□□□ -0.25
NUP50-206ENST00000422489 TECPR2O15040 1411 aa13.51□□□□□ -0.25
NUP50-206ENST00000422489 QTRT2Q9H974 415 aaKnown RBP13.51□□□□□ -0.25
NUP50-206ENST00000422489 PLEKHG5O94827 1062 aa13.5□□□□□ -0.25
NUP50-206ENST00000422489 KRT28Q7Z3Y7 464 aa13.5□□□□□ -0.25
NUP50-206ENST00000422489 STAC3Q96MF2 364 aa13.5□□□□□ -0.25
NUP50-206ENST00000422489 HIRIP3Q9BW71 556 aaPredicted RBP13.5□□□□□ -0.25
NUP50-206ENST00000422489 MYOM2P54296 1465 aa13.49□□□□□ -0.25
NUP50-206ENST00000422489 PHF8Q9UPP1 1060 aa13.49□□□□□ -0.25
NUP50-206ENST00000422489 NRXN1Q9ULB1 1477 aa13.48□□□□□ -0.25
NUP50-206ENST00000422489 MINK1Q8N4C8 1332 aaPredicted RBP13.48□□□□□ -0.25
NUP50-206ENST00000422489 SHPRHQ149N8 1683 aa13.48□□□□□ -0.25
NUP50-206ENST00000422489 PSME1Q06323 249 aa13.48□□□□□ -0.25
NUP50-206ENST00000422489 PMFBP1Q8TBY8 1022 aa13.48□□□□□ -0.25
NUP50-206ENST00000422489 IFT172Q9UG01 1749 aa13.47□□□□□ -0.25
NUP50-206ENST00000422489 LMOD2Q6P5Q4 547 aa13.47□□□□□ -0.25
NUP50-206ENST00000422489 NHSL1Q5SYE7 1610 aa13.46□□□□□ -0.25
NUP50-206ENST00000422489 USP21Q9UK80 565 aa13.46□□□□□ -0.25
NUP50-206ENST00000422489 CDC42BPGQ6DT37 1551 aa13.45□□□□□ -0.26
NUP50-206ENST00000422489 HAP1P54257 671 aaPredicted RBP13.45□□□□□ -0.26
NUP50-206ENST00000422489 RBM6P78332 1123 aaKnown RBP13.45□□□□□ -0.26
NUP50-206ENST00000422489 NEUROD1Q13562 356 aa13.44□□□□□ -0.26
NUP50-206ENST00000422489 SPATA31A3Q5VYP0 1347 aa13.43□□□□□ -0.26
NUP50-206ENST00000422489 WASLO00401 505 aaPredicted RBP13.43□□□□□ -0.26
NUP50-206ENST00000422489 CABLES1Q8TDN4 633 aa13.42□□□□□ -0.26
NUP50-206ENST00000422489 SIN3AQ96ST3 1273 aa13.42□□□□□ -0.26
NUP50-206ENST00000422489 TRPC5Q9UL62 973 aaPredicted RBP13.42□□□□□ -0.26
NUP50-206ENST00000422489 PXDNQ92626 1479 aa13.42□□□□□ -0.26
NUP50-206ENST00000422489 NBPF1Q3BBV0 1214 aa13.41□□□□□ -0.26
NUP50-206ENST00000422489 FNBP4Q8N3X1 1017 aaPredicted RBP13.41□□□□□ -0.26
NUP50-206ENST00000422489 KNDC1Q76NI1 1749 aa13.4□□□□□ -0.26
NUP50-206ENST00000422489 NGDNQ8NEJ9 315 aaKnown RBP13.4□□□□□ -0.26
NUP50-206ENST00000422489 ADGRB1O14514 1584 aa13.4□□□□□ -0.26
NUP50-206ENST00000422489 LAMC1P11047 1609 aa13.39□□□□□ -0.27
NUP50-206ENST00000422489 PAK3O75914 559 aaPredicted RBP13.39□□□□□ -0.27
NUP50-206ENST00000422489 UPF1Q92900 1129 aaKnown RBP eCLIP13.39□□□□□ -0.27
NUP50-206ENST00000422489 L3MBTL2Q969R5 705 aa13.39□□□□□ -0.27
NUP50-206ENST00000422489 CDK19Q9BWU1 502 aa13.39□□□□□ -0.27
NUP50-206ENST00000422489 DLC1Q96QB1 1528 aa13.39□□□□□ -0.27
NUP50-206ENST00000422489 NUDT16Q96DE0 195 aaKnown RBP13.38□□□□□ -0.27
NUP50-206ENST00000422489 PRR36Q9H6K5 1346 aa13.38□□□□□ -0.27
NUP50-206ENST00000422489 GPRASP1Q5JY77 1395 aa13.37□□□□□ -0.27
NUP50-206ENST00000422489 FMN2Q9NZ56 1722 aa13.37□□□□□ -0.27
NUP50-206ENST00000422489 ANKARQ7Z5J8 1434 aa13.37□□□□□ -0.27
NUP50-206ENST00000422489 EIF3AQ14152 1382 aaKnown RBP13.36□□□□□ -0.27
NUP50-206ENST00000422489 SBNO1A3KN83 1393 aa13.35□□□□□ -0.27
NUP50-206ENST00000422489 UNC5CLQ8IV45 518 aa13.35□□□□□ -0.27
NUP50-206ENST00000422489 GJD4Q96KN9 370 aaPredicted RBP13.35□□□□□ -0.27
NUP50-206ENST00000422489 CCDC9Q9Y3X0 531 aaKnown RBP13.35□□□□□ -0.27
NUP50-206ENST00000422489 TNS3Q68CZ2 1445 aa13.34□□□□□ -0.27
NUP50-206ENST00000422489 ARHGEF10O15013 1369 aa13.33□□□□□ -0.27
NUP50-206ENST00000422489 SRPK2P78362 688 aaKnown RBP13.33□□□□□ -0.28
NUP50-206ENST00000422489 CDK12Q9NYV4 1490 aaPredicted RBP13.33□□□□□ -0.28
NUP50-206ENST00000422489 RGS12O14924 1447 aa13.32□□□□□ -0.28
NUP50-206ENST00000422489 ATRNO75882 1429 aa13.32□□□□□ -0.28
NUP50-206ENST00000422489 KIF1AQ12756 1690 aa13.32□□□□□ -0.28
NUP50-206ENST00000422489 BCL9LQ86UU0 1499 aa13.32□□□□□ -0.28
NUP50-206ENST00000422489 FAM83GA6ND36 823 aa13.32□□□□□ -0.28
NUP50-206ENST00000422489 CCDC61Q9Y6R9 512 aa13.32□□□□□ -0.28
NUP50-206ENST00000422489 CENPJQ9HC77 1338 aaPredicted RBP13.32□□□□□ -0.28
NUP50-206ENST00000422489 COL22A1Q8NFW1 1626 aaPredicted RBP13.31□□□□□ -0.28
NUP50-206ENST00000422489 NUTM2GQ5VZR2 741 aa13.31□□□□□ -0.28
NUP50-206ENST00000422489 CABP2Q9NPB3 220 aa13.31□□□□□ -0.28
NUP50-206ENST00000422489 TULP4Q9NRJ4 1543 aa13.3□□□□□ -0.28
NUP50-206ENST00000422489 NBPF8Q3BBV2 869 aa13.3□□□□□ -0.28
NUP50-206ENST00000422489 ACEP12821 1306 aa13.3□□□□□ -0.28
NUP50-206ENST00000422489 TRIM26Q12899 539 aaPredicted RBP13.29□□□□□ -0.28
NUP50-206ENST00000422489 ADGRB2O60241 1585 aa13.28□□□□□ -0.28
NUP50-206ENST00000422489 RGPD8O14715 1765 aaPredicted RBP13.28□□□□□ -0.28
NUP50-206ENST00000422489 PLEKHG3A1L390 1219 aa13.28□□□□□ -0.28
NUP50-206ENST00000422489 VPS72Q15906 364 aa13.28□□□□□ -0.28
NUP50-206ENST00000422489 BTG4Q9NY30 223 aa13.28□□□□□ -0.28
NUP50-206ENST00000422489 USP32Q8NFA0 1604 aa13.28□□□□□ -0.28
NUP50-206ENST00000422489 A0A0G2JS52 829 aa13.27□□□□□ -0.29
NUP50-206ENST00000422489 MYT1Q01538 1121 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms