RNA–Protein interactions for RNA: ENST00000422447.7

LDHA-205, Transcript of lactate dehydrogenase A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDHA, Length 2,416 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-205ENST00000422447 CCDC146Q8IYE0 955 aa16.81■□□□□ 0.28
LDHA-205ENST00000422447 TULP4Q9NRJ4 1543 aa16.81■□□□□ 0.28
LDHA-205ENST00000422447 TNNT2P45379 298 aaPredicted RBP16.8■□□□□ 0.28
LDHA-205ENST00000422447 MORC1Q86VD1 984 aa16.8■□□□□ 0.28
LDHA-205ENST00000422447 ARHGEF28Q8N1W1 1705 aaKnown RBP16.8■□□□□ 0.28
LDHA-205ENST00000422447 CEBPAP49715 358 aaPredicted RBP16.79■□□□□ 0.28
LDHA-205ENST00000422447 PLPPR3Q6T4P5 718 aa16.79■□□□□ 0.28
LDHA-205ENST00000422447 PUS7Q96PZ0 661 aaKnown RBP16.79■□□□□ 0.28
LDHA-205ENST00000422447 CCDC136Q96JN2 1154 aa16.78■□□□□ 0.28
LDHA-205ENST00000422447 PRAM1Q96QH2 718 aa16.78■□□□□ 0.28
LDHA-205ENST00000422447 ZNF521Q96K83 1311 aa16.78■□□□□ 0.28
LDHA-205ENST00000422447 APAF1O14727 1248 aa16.76■□□□□ 0.27
LDHA-205ENST00000422447 MINK1Q8N4C8 1332 aaPredicted RBP16.76■□□□□ 0.27
LDHA-205ENST00000422447 YTHDC2Q9H6S0 1430 aaKnown RBP16.76■□□□□ 0.27
LDHA-205ENST00000422447 CGNL1Q0VF96 1302 aa16.76■□□□□ 0.27
LDHA-205ENST00000422447 SRPK2P78362 688 aaKnown RBP16.76■□□□□ 0.27
LDHA-205ENST00000422447 EXOC6Q8TAG9 804 aa16.76■□□□□ 0.27
LDHA-205ENST00000422447 A2ML1A8K2U0 1454 aa16.75■□□□□ 0.27
LDHA-205ENST00000422447 PTPRMP28827 1452 aa16.75■□□□□ 0.27
LDHA-205ENST00000422447 POGKQ9P215 609 aa16.75■□□□□ 0.27
LDHA-205ENST00000422447 POLR3AO14802 1390 aaPredicted RBP16.75■□□□□ 0.27
LDHA-205ENST00000422447 ANKRD36BQ8N2N9 1353 aa16.75■□□□□ 0.27
LDHA-205ENST00000422447 PLIN1O60240 522 aa16.75■□□□□ 0.27
LDHA-205ENST00000422447 DUSP27Q5VZP5 1158 aa16.75■□□□□ 0.27
LDHA-205ENST00000422447 FER1L4A9Z1Z3 1794 aa16.75■□□□□ 0.27
LDHA-205ENST00000422447 GOLGA2Q08379 1002 aa16.74■□□□□ 0.27
LDHA-205ENST00000422447 TNRQ92752 1358 aa16.73■□□□□ 0.27
LDHA-205ENST00000422447 ALKQ9UM73 1620 aa16.73■□□□□ 0.27
LDHA-205ENST00000422447 C3P01024 1663 aa16.72■□□□□ 0.27
LDHA-205ENST00000422447 RIMS2Q9UQ26 1411 aa16.71■□□□□ 0.27
LDHA-205ENST00000422447 MTHFSP49914 203 aa16.71■□□□□ 0.27
LDHA-205ENST00000422447 SPINK5Q9NQ38 1064 aaPredicted RBP16.71■□□□□ 0.27
LDHA-205ENST00000422447 A0A1W2PP64 1363 aa16.7■□□□□ 0.26
LDHA-205ENST00000422447 SLFN5Q08AF3 891 aa16.7■□□□□ 0.26
LDHA-205ENST00000422447 WAPLQ7Z5K2 1190 aa16.69■□□□□ 0.26
LDHA-205ENST00000422447 CDK19Q9BWU1 502 aa16.68■□□□□ 0.26
LDHA-205ENST00000422447 DMRT2Q9Y5R5 561 aa16.68■□□□□ 0.26
LDHA-205ENST00000422447 USP32Q8NFA0 1604 aa16.67■□□□□ 0.26
LDHA-205ENST00000422447 TRMT2AQ8IZ69 625 aaKnown RBP16.67■□□□□ 0.26
LDHA-205ENST00000422447 ATAD2Q6PL18 1390 aa16.67■□□□□ 0.26
LDHA-205ENST00000422447 NINLQ9Y2I6 1382 aa16.66■□□□□ 0.26
LDHA-205ENST00000422447 GGNBP2Q9H3C7 697 aa16.66■□□□□ 0.26
LDHA-205ENST00000422447 UBR1Q8IWV7 1749 aa16.66■□□□□ 0.26
LDHA-205ENST00000422447 NSD2O96028 1365 aa16.66■□□□□ 0.26
LDHA-205ENST00000422447 ABCC11Q96J66 1382 aa16.66■□□□□ 0.26
LDHA-205ENST00000422447 C20orf194Q5TEA3 1177 aa16.65■□□□□ 0.26
LDHA-205ENST00000422447 CRBNQ96SW2 442 aa16.65■□□□□ 0.26
LDHA-205ENST00000422447 TERF2IPQ9NYB0 399 aa16.65■□□□□ 0.26
LDHA-205ENST00000422447 CABP1Q9NZU7 370 aa16.65■□□□□ 0.26
LDHA-205ENST00000422447 CD163L1Q9NR16 1453 aa16.64■□□□□ 0.25
LDHA-205ENST00000422447 RIMS1Q86UR5 1692 aaKnown RBP16.64■□□□□ 0.25
LDHA-205ENST00000422447 FYB1O15117 783 aa16.64■□□□□ 0.25
LDHA-205ENST00000422447 CFAP53Q96M91 514 aa16.64■□□□□ 0.25
LDHA-205ENST00000422447 WWC1Q8IX03 1113 aa16.63■□□□□ 0.25
LDHA-205ENST00000422447 METP08581 1390 aa16.62■□□□□ 0.25
LDHA-205ENST00000422447 SHPRHQ149N8 1683 aa16.62■□□□□ 0.25
LDHA-205ENST00000422447 NEUROD2Q15784 382 aa16.62■□□□□ 0.25
LDHA-205ENST00000422447 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.62■□□□□ 0.25
LDHA-205ENST00000422447 RRP7AQ9Y3A4 280 aaKnown RBP16.62■□□□□ 0.25
LDHA-205ENST00000422447 E9PSI1 815 aa16.62■□□□□ 0.25
LDHA-205ENST00000422447 NGEFQ8N5V2 710 aa16.62■□□□□ 0.25
LDHA-205ENST00000422447 RUNDC1Q96C34 613 aa16.62■□□□□ 0.25
LDHA-205ENST00000422447 TCP11L2Q8N4U5 519 aa16.61■□□□□ 0.25
LDHA-205ENST00000422447 NRXN3Q9Y4C0 1643 aa16.61■□□□□ 0.25
LDHA-205ENST00000422447 HDGFL2Q7Z4V5 671 aaPredicted RBP16.6■□□□□ 0.25
LDHA-205ENST00000422447 TXNDC2Q86VQ3 553 aa16.6■□□□□ 0.25
LDHA-205ENST00000422447 SETD1AO15047 1707 aaKnown RBP16.6■□□□□ 0.25
LDHA-205ENST00000422447 TMEM2Q9UHN6 1383 aa16.6■□□□□ 0.25
LDHA-205ENST00000422447 DLC1Q96QB1 1528 aa16.59■□□□□ 0.25
LDHA-205ENST00000422447 NLRP1Q9C000 1473 aa16.59■□□□□ 0.25
LDHA-205ENST00000422447 U2AF1L5P0DN76 240 aaPredicted RBP16.59■□□□□ 0.25
LDHA-205ENST00000422447 U2AF1Q01081 240 aaKnown RBP eCLIP16.59■□□□□ 0.25
LDHA-205ENST00000422447 NKTRP30414 1462 aaKnown RBP16.58■□□□□ 0.25
LDHA-205ENST00000422447 LTKP29376 864 aa16.58■□□□□ 0.24
LDHA-205ENST00000422447 ADAMTSL3P82987 1691 aa16.58■□□□□ 0.24
LDHA-205ENST00000422447 BCAR3O75815 825 aa16.57■□□□□ 0.24
LDHA-205ENST00000422447 HDGFP51858 240 aaKnown RBP16.56■□□□□ 0.24
LDHA-205ENST00000422447 PHF23Q9BUL5 403 aaPredicted RBP16.56■□□□□ 0.24
LDHA-205ENST00000422447 IQSEC2Q5JU85 1478 aa16.56■□□□□ 0.24
LDHA-205ENST00000422447 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.56■□□□□ 0.24
LDHA-205ENST00000422447 FANCIQ9NVI1 1328 aa16.55■□□□□ 0.24
LDHA-205ENST00000422447 WASLO00401 505 aaPredicted RBP16.55■□□□□ 0.24
LDHA-205ENST00000422447 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.54■□□□□ 0.24
LDHA-205ENST00000422447 U2SURPO15042 1029 aaKnown RBP16.54■□□□□ 0.24
LDHA-205ENST00000422447 MSH5O43196 834 aa16.54■□□□□ 0.24
LDHA-205ENST00000422447 FBLN1P23142 703 aa16.54■□□□□ 0.24
LDHA-205ENST00000422447 MED14O60244 1454 aa16.53■□□□□ 0.24
LDHA-205ENST00000422447 NCKAP5LQ9HCH0 1330 aa16.53■□□□□ 0.24
LDHA-205ENST00000422447 COL3A1P02461 1466 aaPredicted RBP16.51■□□□□ 0.23
LDHA-205ENST00000422447 CCDC27Q2M243 656 aa16.51■□□□□ 0.23
LDHA-205ENST00000422447 WDR63Q8IWG1 891 aa16.51■□□□□ 0.23
LDHA-205ENST00000422447 PLEKHF1Q96S99 279 aa16.5■□□□□ 0.23
LDHA-205ENST00000422447 ADAMTS13Q76LX8 1427 aa16.5■□□□□ 0.23
LDHA-205ENST00000422447 NUDT16Q96DE0 195 aaKnown RBP16.5■□□□□ 0.23
LDHA-205ENST00000422447 SIRT1Q96EB6 747 aa16.5■□□□□ 0.23
LDHA-205ENST00000422447 CEP170BQ9Y4F5 1589 aaPredicted RBP16.5■□□□□ 0.23
LDHA-205ENST00000422447 SLC26A8Q96RN1 970 aa16.49■□□□□ 0.23
LDHA-205ENST00000422447 FAM135BQ49AJ0 1406 aa16.49■□□□□ 0.23
LDHA-205ENST00000422447 PPIP5K1Q6PFW1 1433 aa16.49■□□□□ 0.23
LDHA-205ENST00000422447 ATP7BP35670 1465 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms