RNA–Protein interactions for RNA: ENST00000422441.5

ITGA9-203, Transcript of integrin subunit alpha 9, humanhuman

TSL 1 (best) BASIC

Gene ITGA9, Length 2,282 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA9-203ENST00000422441 IPO9Q96P70 1041 aaKnown RBP33.76■■■■□ 3
ITGA9-203ENST00000422441 EVC2Q86UK5 1308 aa33.75■■■□□ 2.99
ITGA9-203ENST00000422441 SHPRHQ149N8 1683 aa33.75■■■□□ 2.99
ITGA9-203ENST00000422441 TULP4Q9NRJ4 1543 aa33.75■■■□□ 2.99
ITGA9-203ENST00000422441 PDE4AP27815 886 aa33.75■■■□□ 2.99
ITGA9-203ENST00000422441 SLC52A1Q9NWF4 448 aa33.75■■■□□ 2.99
ITGA9-203ENST00000422441 ZFYVE9O95405 1425 aa33.74■■■□□ 2.99
ITGA9-203ENST00000422441 TNNT2P45379 298 aaPredicted RBP33.73■■■□□ 2.99
ITGA9-203ENST00000422441 DMRT2Q9Y5R5 561 aa33.73■■■□□ 2.99
ITGA9-203ENST00000422441 PAK3O75914 559 aaPredicted RBP33.72■■■□□ 2.99
ITGA9-203ENST00000422441 CGNL1Q0VF96 1302 aa33.72■■■□□ 2.99
ITGA9-203ENST00000422441 KDM2BQ8NHM5 1336 aa33.72■■■□□ 2.99
ITGA9-203ENST00000422441 BACH2Q9BYV9 841 aa33.72■■■□□ 2.99
ITGA9-203ENST00000422441 ANKRD36BQ8N2N9 1353 aa33.68■■■□□ 2.98
ITGA9-203ENST00000422441 WWC1Q8IX03 1113 aa33.67■■■□□ 2.98
ITGA9-203ENST00000422441 MYO5BQ9ULV0 1848 aa33.67■■■□□ 2.98
ITGA9-203ENST00000422441 PREX1Q8TCU6 1659 aa33.67■■■□□ 2.98
ITGA9-203ENST00000422441 SKAP1Q86WV1 359 aa33.65■■■□□ 2.98
ITGA9-203ENST00000422441 TMEM131LA2VDJ0 1609 aa33.65■■■□□ 2.98
ITGA9-203ENST00000422441 CABP2Q9NPB3 220 aa33.64■■■□□ 2.98
ITGA9-203ENST00000422441 BCAR3O75815 825 aa33.64■■■□□ 2.98
ITGA9-203ENST00000422441 MTHFSP49914 203 aa33.64■■■□□ 2.98
ITGA9-203ENST00000422441 CENPQQ7L2Z9 268 aaPredicted RBP33.64■■■□□ 2.98
ITGA9-203ENST00000422441 RUNDC1Q96C34 613 aa33.64■■■□□ 2.98
ITGA9-203ENST00000422441 NSD2O96028 1365 aa33.62■■■□□ 2.97
ITGA9-203ENST00000422441 CYB5RLQ6IPT4 315 aa33.6■■■□□ 2.97
ITGA9-203ENST00000422441 SAFB2Q14151 953 aaKnown RBP eCLIP33.6■■■□□ 2.97
ITGA9-203ENST00000422441 STK26Q9P289 416 aa33.59■■■□□ 2.97
ITGA9-203ENST00000422441 ZBTB47Q9UFB7 747 aaPredicted RBP33.59■■■□□ 2.97
ITGA9-203ENST00000422441 IQSEC2Q5JU85 1478 aa33.59■■■□□ 2.97
ITGA9-203ENST00000422441 CFAP53Q96M91 514 aa33.58■■■□□ 2.97
ITGA9-203ENST00000422441 TCP11L2Q8N4U5 519 aa33.56■■■□□ 2.96
ITGA9-203ENST00000422441 PHF23Q9BUL5 403 aaPredicted RBP33.56■■■□□ 2.96
ITGA9-203ENST00000422441 NPM2Q86SE8 214 aaKnown RBP33.55■■■□□ 2.96
ITGA9-203ENST00000422441 SENP3Q9H4L4 574 aaPredicted RBP33.55■■■□□ 2.96
ITGA9-203ENST00000422441 PTPRMP28827 1452 aa33.54■■■□□ 2.96
ITGA9-203ENST00000422441 FBXO31Q5XUX0 539 aaPredicted RBP33.54■■■□□ 2.96
ITGA9-203ENST00000422441 RRP7AQ9Y3A4 280 aaKnown RBP33.54■■■□□ 2.96
ITGA9-203ENST00000422441 NINLQ9Y2I6 1382 aa33.54■■■□□ 2.96
ITGA9-203ENST00000422441 NEUROD2Q15784 382 aa33.53■■■□□ 2.96
ITGA9-203ENST00000422441 A0A1W2PP64 1363 aa33.51■■■□□ 2.96
ITGA9-203ENST00000422441 SRPK2P78362 688 aaKnown RBP33.5■■■□□ 2.95
ITGA9-203ENST00000422441 ABCC11Q96J66 1382 aa33.5■■■□□ 2.95
ITGA9-203ENST00000422441 FAM69CQ0P6D2 419 aa33.5■■■□□ 2.95
ITGA9-203ENST00000422441 YTHDC2Q9H6S0 1430 aaKnown RBP33.49■■■□□ 2.95
ITGA9-203ENST00000422441 WDR63Q8IWG1 891 aa33.49■■■□□ 2.95
ITGA9-203ENST00000422441 PDE3AQ14432 1141 aa33.48■■■□□ 2.95
ITGA9-203ENST00000422441 CCDC27Q2M243 656 aa33.48■■■□□ 2.95
ITGA9-203ENST00000422441 PRAM1Q96QH2 718 aa33.48■■■□□ 2.95
ITGA9-203ENST00000422441 MINK1Q8N4C8 1332 aaPredicted RBP33.45■■■□□ 2.95
ITGA9-203ENST00000422441 ATAD2Q6PL18 1390 aa33.45■■■□□ 2.94
ITGA9-203ENST00000422441 NCBP3Q53F19 620 aaKnown RBP33.44■■■□□ 2.94
ITGA9-203ENST00000422441 DIP2BQ9P265 1576 aa33.44■■■□□ 2.94
ITGA9-203ENST00000422441 CLTCQ00610 1675 aaKnown RBP33.43■■■□□ 2.94
ITGA9-203ENST00000422441 ALKQ9UM73 1620 aa33.43■■■□□ 2.94
ITGA9-203ENST00000422441 POGKQ9P215 609 aa33.43■■■□□ 2.94
ITGA9-203ENST00000422441 U2AF1L5P0DN76 240 aaPredicted RBP33.42■■■□□ 2.94
ITGA9-203ENST00000422441 U2AF1Q01081 240 aaKnown RBP eCLIP33.42■■■□□ 2.94
ITGA9-203ENST00000422441 CD163L1Q9NR16 1453 aa33.4■■■□□ 2.94
ITGA9-203ENST00000422441 REREQ9P2R6 1566 aa33.4■■■□□ 2.94
ITGA9-203ENST00000422441 RARSP54136 660 aaKnown RBP33.4■■■□□ 2.94
ITGA9-203ENST00000422441 GGNBP2Q9H3C7 697 aa33.4■■■□□ 2.94
ITGA9-203ENST00000422441 TERF2IPQ9NYB0 399 aa33.39■■■□□ 2.94
ITGA9-203ENST00000422441 AGLP35573 1532 aa33.38■■■□□ 2.93
ITGA9-203ENST00000422441 PPP6R1Q9UPN7 881 aa33.38■■■□□ 2.93
ITGA9-203ENST00000422441 STAG3Q9UJ98 1225 aa33.37■■■□□ 2.93
ITGA9-203ENST00000422441 RIMBP3CA6NJZ7 1639 aa33.37■■■□□ 2.93
ITGA9-203ENST00000422441 RIMBP3BA6NNM3 1639 aa33.37■■■□□ 2.93
ITGA9-203ENST00000422441 RIMBP3Q9UFD9 1639 aa33.37■■■□□ 2.93
ITGA9-203ENST00000422441 TSPOAP1O95153 1857 aa33.37■■■□□ 2.93
ITGA9-203ENST00000422441 ADGRB2O60241 1585 aa33.37■■■□□ 2.93
ITGA9-203ENST00000422441 CANXP27824 592 aaKnown RBP33.37■■■□□ 2.93
ITGA9-203ENST00000422441 FYB1O15117 783 aa33.36■■■□□ 2.93
ITGA9-203ENST00000422441 PANK1Q8TE04 598 aa33.36■■■□□ 2.93
ITGA9-203ENST00000422441 NBR1Q14596 966 aa33.36■■■□□ 2.93
ITGA9-203ENST00000422441 MED14O60244 1454 aa33.35■■■□□ 2.93
ITGA9-203ENST00000422441 ANKRD26Q9UPS8 1709 aa33.34■■■□□ 2.93
ITGA9-203ENST00000422441 COG6Q9Y2V7 657 aa33.34■■■□□ 2.93
ITGA9-203ENST00000422441 NLRP1Q9C000 1473 aa33.34■■■□□ 2.93
ITGA9-203ENST00000422441 IGHDP01880 384 aa33.33■■■□□ 2.93
ITGA9-203ENST00000422441 ARHGEF40Q8TER5 1519 aa33.33■■■□□ 2.93
ITGA9-203ENST00000422441 COL3A1P02461 1466 aaPredicted RBP33.33■■■□□ 2.93
ITGA9-203ENST00000422441 CDK19Q9BWU1 502 aa33.33■■■□□ 2.93
ITGA9-203ENST00000422441 FAM161AQ3B820 660 aa33.32■■■□□ 2.93
ITGA9-203ENST00000422441 FRAT1Q92837 279 aaPredicted RBP33.32■■■□□ 2.92
ITGA9-203ENST00000422441 CLUAP1Q96AJ1 413 aa33.32■■■□□ 2.92
ITGA9-203ENST00000422441 C8orf34Q49A92 452 aa33.31■■■□□ 2.92
ITGA9-203ENST00000422441 MYH16Q9H6N6 1097 aa33.31■■■□□ 2.92
ITGA9-203ENST00000422441 PLEKHF1Q96S99 279 aa33.3■■■□□ 2.92
ITGA9-203ENST00000422441 A2ML1A8K2U0 1454 aa33.3■■■□□ 2.92
ITGA9-203ENST00000422441 RGS3P49796 1198 aa33.29■■■□□ 2.92
ITGA9-203ENST00000422441 HDGFL2Q7Z4V5 671 aaPredicted RBP33.28■■■□□ 2.92
ITGA9-203ENST00000422441 SPATA31D1Q6ZQQ2 1576 aa33.27■■■□□ 2.92
ITGA9-203ENST00000422441 U2SURPO15042 1029 aaKnown RBP33.27■■■□□ 2.92
ITGA9-203ENST00000422441 CABP1Q9NZU7 370 aa33.26■■■□□ 2.92
ITGA9-203ENST00000422441 DLC1Q96QB1 1528 aa33.24■■■□□ 2.91
ITGA9-203ENST00000422441 DDRGK1Q96HY6 314 aa33.24■■■□□ 2.91
ITGA9-203ENST00000422441 RIMS2Q9UQ26 1411 aa33.23■■■□□ 2.91
ITGA9-203ENST00000422441 RLBP1P12271 317 aa33.22■■■□□ 2.91
ITGA9-203ENST00000422441 BCL2L13Q9BXK5 485 aa33.22■■■□□ 2.91
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms