RNA–Protein interactions for RNA: ENST00000420489.6

CNGA1-203, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene CNGA1, Length 2,746 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-203ENST00000420489 CROCC2H7BZ55 1655 aa7.04□□□□□ -1.28
CNGA1-203ENST00000420489 PTCH1Q13635 1447 aa7.04□□□□□ -1.28
CNGA1-203ENST00000420489 SETD5Q9C0A6 1442 aa7.04□□□□□ -1.28
CNGA1-203ENST00000420489 ABCC1P33527 1531 aa7.04□□□□□ -1.28
CNGA1-203ENST00000420489 LCE2DQ5TA82 110 aaPredicted RBP7.04□□□□□ -1.28
CNGA1-203ENST00000420489 MEX3CQ5U5Q3 659 aaKnown RBP7.04□□□□□ -1.28
CNGA1-203ENST00000420489 ZNF710Q8N1W2 664 aa7.04□□□□□ -1.28
CNGA1-203ENST00000420489 SAMD9Q5K651 1589 aa7.03□□□□□ -1.28
CNGA1-203ENST00000420489 SCAPERQ9BY12 1400 aa7.03□□□□□ -1.28
CNGA1-203ENST00000420489 GIGYF1O75420 1035 aaPredicted RBP7.03□□□□□ -1.28
CNGA1-203ENST00000420489 KCNH8Q96L42 1107 aa7.03□□□□□ -1.28
CNGA1-203ENST00000420489 LAMC1P11047 1609 aa7.03□□□□□ -1.28
CNGA1-203ENST00000420489 PLXNC1O60486 1568 aa7.03□□□□□ -1.28
CNGA1-203ENST00000420489 KIF27Q86VH2 1401 aa7.03□□□□□ -1.28
CNGA1-203ENST00000420489 CTTNBP2Q8WZ74 1663 aa7.02□□□□□ -1.29
CNGA1-203ENST00000420489 KIAA1210Q9ULL0 1709 aa7.02□□□□□ -1.29
CNGA1-203ENST00000420489 CLTCQ00610 1675 aaKnown RBP7.02□□□□□ -1.29
CNGA1-203ENST00000420489 NEXMIFQ5QGS0 1516 aa7.01□□□□□ -1.29
CNGA1-203ENST00000420489 CHGAP10645 457 aaKnown RBP7.01□□□□□ -1.29
CNGA1-203ENST00000420489 THEMISQ8N1K5 641 aaPredicted RBP7.01□□□□□ -1.29
CNGA1-203ENST00000420489 PRDM15P57071 1507 aaPredicted RBP7.01□□□□□ -1.29
CNGA1-203ENST00000420489 NUTM2BA6NNL0 878 aaPredicted RBP7□□□□□ -1.29
CNGA1-203ENST00000420489 NUTM2EB1AL46 878 aaPredicted RBP7□□□□□ -1.29
CNGA1-203ENST00000420489 HSPA6P17066 643 aa7□□□□□ -1.29
CNGA1-203ENST00000420489 NUTM2DQ5VT03 806 aaPredicted RBP7□□□□□ -1.29
CNGA1-203ENST00000420489 NUTM2AQ8IVF1 878 aaPredicted RBP7□□□□□ -1.29
CNGA1-203ENST00000420489 ITSN2Q9NZM3 1697 aa7□□□□□ -1.29
CNGA1-203ENST00000420489 AFF2P51816 1311 aa7□□□□□ -1.29
CNGA1-203ENST00000420489 MYO5CQ9NQX4 1742 aa7□□□□□ -1.29
CNGA1-203ENST00000420489 MLECQ14165 292 aa6.99□□□□□ -1.29
CNGA1-203ENST00000420489 TMC2Q8TDI7 906 aa6.99□□□□□ -1.29
CNGA1-203ENST00000420489 SLIT1O75093 1534 aa6.99□□□□□ -1.29
CNGA1-203ENST00000420489 HOXB1P14653 301 aaPredicted RBP6.99□□□□□ -1.29
CNGA1-203ENST00000420489 PZPP20742 1482 aa6.99□□□□□ -1.29
CNGA1-203ENST00000420489 ADGRB2O60241 1585 aa6.99□□□□□ -1.29
CNGA1-203ENST00000420489 EMP3P54852 163 aa6.99□□□□□ -1.29
CNGA1-203ENST00000420489 AMER1Q5JTC6 1135 aaPredicted RBP6.99□□□□□ -1.29
CNGA1-203ENST00000420489 HOXB3P14651 431 aaPredicted RBP6.98□□□□□ -1.29
CNGA1-203ENST00000420489 CARMIL1Q5VZK9 1371 aa6.98□□□□□ -1.29
CNGA1-203ENST00000420489 COL22A1Q8NFW1 1626 aaPredicted RBP6.98□□□□□ -1.29
CNGA1-203ENST00000420489 MAP3K5Q99683 1374 aa6.97□□□□□ -1.29
CNGA1-203ENST00000420489 CDAN1Q8IWY9 1227 aa6.97□□□□□ -1.29
CNGA1-203ENST00000420489 TRPC5Q9UL62 973 aaPredicted RBP6.97□□□□□ -1.29
CNGA1-203ENST00000420489 JMYQ8N9B5 988 aa6.97□□□□□ -1.29
CNGA1-203ENST00000420489 RREB1Q92766 1687 aa6.96□□□□□ -1.29
CNGA1-203ENST00000420489 SF3B2Q13435 895 aaKnown RBP6.96□□□□□ -1.29
CNGA1-203ENST00000420489 TNS4Q8IZW8 715 aa6.96□□□□□ -1.29
CNGA1-203ENST00000420489 QTRT2Q9H974 415 aaKnown RBP6.96□□□□□ -1.29
CNGA1-203ENST00000420489 UGGT1Q9NYU2 1555 aa6.96□□□□□ -1.3
CNGA1-203ENST00000420489 TNRQ92752 1358 aa6.95□□□□□ -1.3
CNGA1-203ENST00000420489 SHANK3Q9BYB0 1731 aa6.95□□□□□ -1.3
CNGA1-203ENST00000420489 KIDINS220Q9ULH0 1771 aa6.94□□□□□ -1.3
CNGA1-203ENST00000420489 KIF3CO14782 793 aa6.94□□□□□ -1.3
CNGA1-203ENST00000420489 APLP1P51693 650 aa6.94□□□□□ -1.3
CNGA1-203ENST00000420489 SAMD9LQ8IVG5 1584 aa6.94□□□□□ -1.3
CNGA1-203ENST00000420489 DLC1Q96QB1 1528 aa6.94□□□□□ -1.3
CNGA1-203ENST00000420489 DCCP43146 1447 aa6.94□□□□□ -1.3
CNGA1-203ENST00000420489 PLEKHH2Q8IVE3 1493 aa6.94□□□□□ -1.3
CNGA1-203ENST00000420489 TMEM92Q6UXU6 159 aa6.93□□□□□ -1.3
CNGA1-203ENST00000420489 RGPD3A6NKT7 1758 aaPredicted RBP6.93□□□□□ -1.3
CNGA1-203ENST00000420489 RGPD4Q7Z3J3 1758 aa6.93□□□□□ -1.3
CNGA1-203ENST00000420489 MSH6P52701 1360 aa6.93□□□□□ -1.3
CNGA1-203ENST00000420489 BAG6P46379 1132 aa6.92□□□□□ -1.3
CNGA1-203ENST00000420489 RGS19P49795 217 aa6.92□□□□□ -1.3
CNGA1-203ENST00000420489 FNBP4Q8N3X1 1017 aaPredicted RBP6.92□□□□□ -1.3
CNGA1-203ENST00000420489 ADGBQ8N7X0 1667 aa6.92□□□□□ -1.3
CNGA1-203ENST00000420489 GPATCH8Q9UKJ3 1502 aaKnown RBP6.92□□□□□ -1.3
CNGA1-203ENST00000420489 MARF1Q9Y4F3 1742 aaKnown RBP6.92□□□□□ -1.3
CNGA1-203ENST00000420489 ERBB3P21860 1342 aa6.92□□□□□ -1.3
CNGA1-203ENST00000420489 EFCAB2Q5VUJ9 269 aa6.92□□□□□ -1.3
CNGA1-203ENST00000420489 PITPNM2Q9BZ72 1349 aa6.91□□□□□ -1.3
CNGA1-203ENST00000420489 TBC1D12O60347 775 aa6.91□□□□□ -1.3
CNGA1-203ENST00000420489 C2orf72A6NCS6 295 aa6.91□□□□□ -1.3
CNGA1-203ENST00000420489 PLSCR2Q9NRY7 297 aa6.91□□□□□ -1.3
CNGA1-203ENST00000420489 RPRD2Q5VT52 1461 aaKnown RBP6.9□□□□□ -1.3
CNGA1-203ENST00000420489 ARHGAP35Q9NRY4 1499 aa6.9□□□□□ -1.3
CNGA1-203ENST00000420489 TNS2Q63HR2 1409 aa6.9□□□□□ -1.3
CNGA1-203ENST00000420489 PSDA5PKW4 1024 aaPredicted RBP6.9□□□□□ -1.31
CNGA1-203ENST00000420489 KCNA6P17658 529 aa6.9□□□□□ -1.31
CNGA1-203ENST00000420489 HS3ST6Q96QI5 342 aa6.9□□□□□ -1.31
CNGA1-203ENST00000420489 GPHNQ9NQX3 736 aaPredicted RBP6.89□□□□□ -1.31
CNGA1-203ENST00000420489 PTPN23Q9H3S7 1636 aa6.88□□□□□ -1.31
CNGA1-203ENST00000420489 FAM83GA6ND36 823 aa6.88□□□□□ -1.31
CNGA1-203ENST00000420489 FAM205CA6NFA0 338 aa6.88□□□□□ -1.31
CNGA1-203ENST00000420489 PPP1R37O75864 691 aa6.88□□□□□ -1.31
CNGA1-203ENST00000420489 PDE4AP27815 886 aa6.88□□□□□ -1.31
CNGA1-203ENST00000420489 GPR153Q6NV75 609 aa6.88□□□□□ -1.31
CNGA1-203ENST00000420489 MARVELD3Q96A59 401 aa6.88□□□□□ -1.31
CNGA1-203ENST00000420489 TNS1Q9HBL0 1735 aaKnown RBP6.88□□□□□ -1.31
CNGA1-203ENST00000420489 ABCC5O15440 1437 aa6.88□□□□□ -1.31
CNGA1-203ENST00000420489 FOXK1P85037 733 aa6.88□□□□□ -1.31
CNGA1-203ENST00000420489 MIA2Q96PC5 1412 aa6.87□□□□□ -1.31
CNGA1-203ENST00000420489 BBXQ8WY36 941 aaPredicted RBP6.87□□□□□ -1.31
CNGA1-203ENST00000420489 SLAIN2Q9P270 581 aa6.87□□□□□ -1.31
CNGA1-203ENST00000420489 TMEM94Q12767 1356 aa6.87□□□□□ -1.31
CNGA1-203ENST00000420489 UBR1Q8IWV7 1749 aa6.87□□□□□ -1.31
CNGA1-203ENST00000420489 CASZ1Q86V15 1759 aa6.87□□□□□ -1.31
CNGA1-203ENST00000420489 IGSF5Q9NSI5 407 aa6.86□□□□□ -1.31
CNGA1-203ENST00000420489 INO80Q9ULG1 1556 aaPredicted RBP6.86□□□□□ -1.31
CNGA1-203ENST00000420489 NKX1-1Q15270 411 aaPredicted RBP6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms