RNA–Protein interactions for RNA: ENST00000419069.1

LINC00317-201, long intergenic non-protein coding RNA 317, humanhuman

TSL 1 (best) BASIC

Gene LINC00317, Length 612 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00317-201ENST00000419069 SAMD7Q7Z3H4 446 aa10.85□□□□□ -0.67
LINC00317-201ENST00000419069 RETREG2Q8NC44 543 aa10.85□□□□□ -0.67
LINC00317-201ENST00000419069 NBPF3Q9H094 633 aa10.85□□□□□ -0.67
LINC00317-201ENST00000419069 AXIN2Q9Y2T1 843 aa10.85□□□□□ -0.67
LINC00317-201ENST00000419069 CFAP99D6REC4 459 aa10.84□□□□□ -0.67
LINC00317-201ENST00000419069 PBX2P40425 430 aa10.84□□□□□ -0.67
LINC00317-201ENST00000419069 HDGFL1Q5TGJ6 251 aa10.84□□□□□ -0.67
LINC00317-201ENST00000419069 DMRTA1Q5VZB9 504 aa10.84□□□□□ -0.67
LINC00317-201ENST00000419069 KCTD17Q8N5Z5 321 aa10.84□□□□□ -0.67
LINC00317-201ENST00000419069 LRRN4Q8WUT4 740 aa10.84□□□□□ -0.67
LINC00317-201ENST00000419069 ACIN1Q9UKV3 1341 aaKnown RBP10.84□□□□□ -0.67
LINC00317-201ENST00000419069 ATP6V1AP38606 617 aa10.83□□□□□ -0.68
LINC00317-201ENST00000419069 LAPTM4BQ86VI4 370 aa10.83□□□□□ -0.68
LINC00317-201ENST00000419069 NECTIN2Q92692 538 aa10.83□□□□□ -0.68
LINC00317-201ENST00000419069 TRIM34Q9BYJ4 488 aa10.83□□□□□ -0.68
LINC00317-201ENST00000419069 RANGAP1P46060 587 aaPredicted RBP10.82□□□□□ -0.68
LINC00317-201ENST00000419069 KMT5BQ4FZB7 885 aa10.82□□□□□ -0.68
LINC00317-201ENST00000419069 VPS9D1Q9Y2B5 631 aa10.82□□□□□ -0.68
LINC00317-201ENST00000419069 CCDC9Q9Y3X0 531 aaKnown RBP10.81□□□□□ -0.68
LINC00317-201ENST00000419069 VAC14Q08AM6 782 aa10.8□□□□□ -0.68
LINC00317-201ENST00000419069 POTEEQ6S8J3 1075 aa10.8□□□□□ -0.68
LINC00317-201ENST00000419069 AEBP1Q8IUX7 1158 aa10.8□□□□□ -0.68
LINC00317-201ENST00000419069 PRR7Q8TB68 274 aa10.8□□□□□ -0.68
LINC00317-201ENST00000419069 PDE4CQ08493 712 aa10.79□□□□□ -0.68
LINC00317-201ENST00000419069 ADAMTS19Q8TE59 1207 aa10.78□□□□□ -0.68
LINC00317-201ENST00000419069 SYMPKQ92797 1274 aaKnown RBP10.78□□□□□ -0.68
LINC00317-201ENST00000419069 GPR37L1O60883 481 aa10.77□□□□□ -0.69
LINC00317-201ENST00000419069 EMP3P54852 163 aa10.77□□□□□ -0.69
LINC00317-201ENST00000419069 PBXIP1Q96AQ6 731 aa10.77□□□□□ -0.69
LINC00317-201ENST00000419069 Q3C1V9 767 aa10.76□□□□□ -0.69
LINC00317-201ENST00000419069 RETREG3Q86VR2 466 aa10.76□□□□□ -0.69
LINC00317-201ENST00000419069 PNMA1Q8ND90 353 aa10.76□□□□□ -0.69
LINC00317-201ENST00000419069 OTUD5Q96G74 571 aa10.76□□□□□ -0.69
LINC00317-201ENST00000419069 ZFRQ96KR1 1074 aaKnown RBP10.76□□□□□ -0.69
LINC00317-201ENST00000419069 RFX1P22670 979 aa10.75□□□□□ -0.69
LINC00317-201ENST00000419069 NR6A1Q15406 480 aa10.75□□□□□ -0.69
LINC00317-201ENST00000419069 EPS8L1Q8TE68 723 aa10.75□□□□□ -0.69
LINC00317-201ENST00000419069 LRCH3Q96II8 777 aa10.75□□□□□ -0.69
LINC00317-201ENST00000419069 SOX11P35716 441 aa10.74□□□□□ -0.69
LINC00317-201ENST00000419069 MRPL50Q8N5N7 158 aaKnown RBP10.74□□□□□ -0.69
LINC00317-201ENST00000419069 PRR14Q9BWN1 585 aa10.74□□□□□ -0.69
LINC00317-201ENST00000419069 PUS10Q3MIT2 529 aaKnown RBP10.73□□□□□ -0.69
LINC00317-201ENST00000419069 ZNF687Q8N1G0 1237 aa10.73□□□□□ -0.69
LINC00317-201ENST00000419069 PPP1R12CQ9BZL4 782 aa10.73□□□□□ -0.69
LINC00317-201ENST00000419069 ACTN4O43707 911 aaKnown RBP10.72□□□□□ -0.69
LINC00317-201ENST00000419069 MORN1Q5T089 497 aa10.72□□□□□ -0.69
LINC00317-201ENST00000419069 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.72□□□□□ -0.69
LINC00317-201ENST00000419069 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.71□□□□□ -0.69
LINC00317-201ENST00000419069 PER1O15534 1290 aaPredicted RBP10.71□□□□□ -0.69
LINC00317-201ENST00000419069 SEMA3FQ13275 785 aa10.71□□□□□ -0.69
LINC00317-201ENST00000419069 CFAP70Q5T0N1 1121 aa10.71□□□□□ -0.69
LINC00317-201ENST00000419069 NPM2Q86SE8 214 aaKnown RBP10.71□□□□□ -0.69
LINC00317-201ENST00000419069 MARVELD3Q96A59 401 aa10.71□□□□□ -0.69
LINC00317-201ENST00000419069 ALG2Q9H553 416 aa10.71□□□□□ -0.69
LINC00317-201ENST00000419069 SLC27A5Q9Y2P5 690 aa10.71□□□□□ -0.69
LINC00317-201ENST00000419069 FAM205CA6NFA0 338 aa10.7□□□□□ -0.7
LINC00317-201ENST00000419069 BHMG1C9JSJ3 638 aaPredicted RBP10.7□□□□□ -0.7
LINC00317-201ENST00000419069 TK2O00142 265 aa10.7□□□□□ -0.7
LINC00317-201ENST00000419069 ST18O60284 1047 aa10.7□□□□□ -0.7
LINC00317-201ENST00000419069 CSB-PGBD3P0DP91 1061 aa10.7□□□□□ -0.7
LINC00317-201ENST00000419069 DESI1Q6ICB0 168 aa10.7□□□□□ -0.7
LINC00317-201ENST00000419069 PALM3A6NDB9 673 aaPredicted RBP10.69□□□□□ -0.7
LINC00317-201ENST00000419069 LMOD1P29536 600 aaPredicted RBP10.68□□□□□ -0.7
LINC00317-201ENST00000419069 EIF4G2P78344 907 aaKnown RBP eCLIP10.68□□□□□ -0.7
LINC00317-201ENST00000419069 STAC3Q96MF2 364 aa10.67□□□□□ -0.7
LINC00317-201ENST00000419069 GOLGA8CPA6NN73 597 aa10.66□□□□□ -0.7
LINC00317-201ENST00000419069 LYPD8Q6UX82 237 aa10.66□□□□□ -0.7
LINC00317-201ENST00000419069 ANKK1Q8NFD2 765 aa10.66□□□□□ -0.7
LINC00317-201ENST00000419069 TFIP11Q9UBB9 837 aaKnown RBP10.66□□□□□ -0.7
LINC00317-201ENST00000419069 USTQ9Y2C2 406 aa10.66□□□□□ -0.7
LINC00317-201ENST00000419069 PATL2C9JE40 543 aaKnown RBP10.65□□□□□ -0.7
LINC00317-201ENST00000419069 RNF19BQ6ZMZ0 732 aa10.65□□□□□ -0.7
LINC00317-201ENST00000419069 USB1Q9BQ65 265 aaKnown RBP10.65□□□□□ -0.7
LINC00317-201ENST00000419069 PPP4CP60510 307 aa10.64□□□□□ -0.71
LINC00317-201ENST00000419069 ADGRD1Q6QNK2 874 aa10.64□□□□□ -0.71
LINC00317-201ENST00000419069 UCN2Q96RP3 112 aa10.64□□□□□ -0.71
LINC00317-201ENST00000419069 NR1H3Q13133 447 aa10.63□□□□□ -0.71
LINC00317-201ENST00000419069 BLOC1S3Q6QNY0 202 aa10.63□□□□□ -0.71
LINC00317-201ENST00000419069 LSM11P83369 360 aaKnown RBP eCLIP10.62□□□□□ -0.71
LINC00317-201ENST00000419069 TMCO4Q5TGY1 634 aa10.62□□□□□ -0.71
LINC00317-201ENST00000419069 GZF1Q9H116 711 aaPredicted RBP10.62□□□□□ -0.71
LINC00317-201ENST00000419069 HPS5Q9UPZ3 1129 aa10.62□□□□□ -0.71
LINC00317-201ENST00000419069 NR1I2O75469 434 aa10.61□□□□□ -0.71
LINC00317-201ENST00000419069 FMNL1O95466 1100 aaPredicted RBP10.61□□□□□ -0.71
LINC00317-201ENST00000419069 SRPK2P78362 688 aaKnown RBP10.61□□□□□ -0.71
LINC00317-201ENST00000419069 HS3ST6Q96QI5 342 aa10.61□□□□□ -0.71
LINC00317-201ENST00000419069 FKBPLQ9UIM3 349 aa10.61□□□□□ -0.71
LINC00317-201ENST00000419069 SALL2Q9Y467 1007 aaPredicted RBP10.61□□□□□ -0.71
LINC00317-201ENST00000419069 MAFBQ9Y5Q3 323 aaPredicted RBP10.61□□□□□ -0.71
LINC00317-201ENST00000419069 ZBBXA8MT70 800 aa10.6□□□□□ -0.71
LINC00317-201ENST00000419069 BRICD5Q6PL45 260 aa10.6□□□□□ -0.71
LINC00317-201ENST00000419069 PCDHB3Q9Y5E6 796 aa10.6□□□□□ -0.71
LINC00317-201ENST00000419069 ATP9BO43861 1147 aa10.59□□□□□ -0.71
LINC00317-201ENST00000419069 BRD1O95696 1058 aa10.59□□□□□ -0.71
LINC00317-201ENST00000419069 FBXO45P0C2W1 286 aa10.59□□□□□ -0.71
LINC00317-201ENST00000419069 APLP1P51693 650 aa10.59□□□□□ -0.71
LINC00317-201ENST00000419069 CDCA8Q53HL2 280 aa10.59□□□□□ -0.71
LINC00317-201ENST00000419069 TBC1D9Q6ZT07 1266 aa10.59□□□□□ -0.71
LINC00317-201ENST00000419069 SOWAHBA6NEL2 793 aa10.58□□□□□ -0.72
LINC00317-201ENST00000419069 JUNDP17535 347 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms