RNA–Protein interactions for RNA: ENST00000417664.6

SSBP3-205, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-205ENST00000417664 EID1Q9Y6B2 187 aa22.62■■□□□ 1.21
SSBP3-205ENST00000417664 ANKRD36BQ8N2N9 1353 aa22.61■■□□□ 1.21
SSBP3-205ENST00000417664 USP32Q8NFA0 1604 aa22.61■■□□□ 1.21
SSBP3-205ENST00000417664 THEMISQ8N1K5 641 aaPredicted RBP22.61■■□□□ 1.21
SSBP3-205ENST00000417664 SLC12A5Q9H2X9 1139 aa22.61■■□□□ 1.21
SSBP3-205ENST00000417664 KNDC1Q76NI1 1749 aa22.61■■□□□ 1.21
SSBP3-205ENST00000417664 FAM135BQ49AJ0 1406 aa22.6■■□□□ 1.21
SSBP3-205ENST00000417664 PPP2R1AP30153 589 aa22.59■■□□□ 1.21
SSBP3-205ENST00000417664 METP08581 1390 aa22.59■■□□□ 1.21
SSBP3-205ENST00000417664 SAFB2Q14151 953 aaKnown RBP eCLIP22.58■■□□□ 1.21
SSBP3-205ENST00000417664 SENP3Q9H4L4 574 aaPredicted RBP22.58■■□□□ 1.2
SSBP3-205ENST00000417664 NSD3Q9BZ95 1437 aa22.57■■□□□ 1.2
SSBP3-205ENST00000417664 SRPK2P78362 688 aaKnown RBP22.57■■□□□ 1.2
SSBP3-205ENST00000417664 ADAMTS13Q76LX8 1427 aa22.56■■□□□ 1.2
SSBP3-205ENST00000417664 TXNDC2Q86VQ3 553 aa22.56■■□□□ 1.2
SSBP3-205ENST00000417664 CABP2Q9NPB3 220 aa22.56■■□□□ 1.2
SSBP3-205ENST00000417664 MINK1Q8N4C8 1332 aaPredicted RBP22.56■■□□□ 1.2
SSBP3-205ENST00000417664 NSD2O96028 1365 aa22.56■■□□□ 1.2
SSBP3-205ENST00000417664 CPS1P31327 1500 aa22.55■■□□□ 1.2
SSBP3-205ENST00000417664 CGNL1Q0VF96 1302 aa22.55■■□□□ 1.2
SSBP3-205ENST00000417664 LTKP29376 864 aa22.55■■□□□ 1.2
SSBP3-205ENST00000417664 BCANQ96GW7 911 aa22.55■■□□□ 1.2
SSBP3-205ENST00000417664 MED14O60244 1454 aa22.54■■□□□ 1.2
SSBP3-205ENST00000417664 ADAMTSL3P82987 1691 aa22.54■■□□□ 1.2
SSBP3-205ENST00000417664 CDK19Q9BWU1 502 aa22.52■■□□□ 1.2
SSBP3-205ENST00000417664 TERF2IPQ9NYB0 399 aa22.52■■□□□ 1.2
SSBP3-205ENST00000417664 RIMS1Q86UR5 1692 aaKnown RBP22.52■■□□□ 1.2
SSBP3-205ENST00000417664 DIP2AQ14689 1571 aa22.51■■□□□ 1.19
SSBP3-205ENST00000417664 WAPLQ7Z5K2 1190 aa22.5■■□□□ 1.19
SSBP3-205ENST00000417664 TBX22Q9Y458 520 aa22.5■■□□□ 1.19
SSBP3-205ENST00000417664 CEP170BQ9Y4F5 1589 aaPredicted RBP22.5■■□□□ 1.19
SSBP3-205ENST00000417664 BLMP54132 1417 aaPredicted RBP22.48■■□□□ 1.19
SSBP3-205ENST00000417664 PLEKHH1Q9ULM0 1364 aa22.48■■□□□ 1.19
SSBP3-205ENST00000417664 A0A1W2PP64 1363 aa22.47■■□□□ 1.19
SSBP3-205ENST00000417664 MORC1Q86VD1 984 aa22.46■■□□□ 1.19
SSBP3-205ENST00000417664 SETD1BQ9UPS6 1966 aaKnown RBP22.46■■□□□ 1.19
SSBP3-205ENST00000417664 WASLO00401 505 aaPredicted RBP22.46■■□□□ 1.19
SSBP3-205ENST00000417664 NEFLP07196 543 aa22.46■■□□□ 1.19
SSBP3-205ENST00000417664 HDGFL2Q7Z4V5 671 aaPredicted RBP22.46■■□□□ 1.19
SSBP3-205ENST00000417664 ATP7BP35670 1465 aa22.45■■□□□ 1.18
SSBP3-205ENST00000417664 WDR43Q15061 677 aaKnown RBP eCLIP22.45■■□□□ 1.18
SSBP3-205ENST00000417664 PLPPR3Q6T4P5 718 aa22.45■■□□□ 1.18
SSBP3-205ENST00000417664 ZNF142P52746 1687 aaPredicted RBP22.45■■□□□ 1.18
SSBP3-205ENST00000417664 POLR3AO14802 1390 aaPredicted RBP22.44■■□□□ 1.18
SSBP3-205ENST00000417664 CD163L1Q9NR16 1453 aa22.44■■□□□ 1.18
SSBP3-205ENST00000417664 SMG6Q86US8 1419 aaKnown RBP22.43■■□□□ 1.18
SSBP3-205ENST00000417664 ADGRB2O60241 1585 aa22.42■■□□□ 1.18
SSBP3-205ENST00000417664 PIK3R4Q99570 1358 aa22.42■■□□□ 1.18
SSBP3-205ENST00000417664 ROBO2Q9HCK4 1378 aa22.41■■□□□ 1.18
SSBP3-205ENST00000417664 PDE3BQ13370 1112 aa22.41■■□□□ 1.18
SSBP3-205ENST00000417664 SUPT16HQ9Y5B9 1047 aaKnown RBP22.41■■□□□ 1.18
SSBP3-205ENST00000417664 CABP1Q9NZU7 370 aa22.4■■□□□ 1.18
SSBP3-205ENST00000417664 PTCH1Q13635 1447 aa22.4■■□□□ 1.18
SSBP3-205ENST00000417664 ADAMTS8Q9UP79 889 aa22.39■■□□□ 1.18
SSBP3-205ENST00000417664 SLC26A8Q96RN1 970 aa22.39■■□□□ 1.17
SSBP3-205ENST00000417664 NUDCQ9Y266 331 aa22.39■■□□□ 1.17
SSBP3-205ENST00000417664 PTPRUQ92729 1446 aa22.37■■□□□ 1.17
SSBP3-205ENST00000417664 CCDC61Q9Y6R9 512 aa22.36■■□□□ 1.17
SSBP3-205ENST00000417664 ANKLE2Q86XL3 938 aa22.36■■□□□ 1.17
SSBP3-205ENST00000417664 AMOTL2Q9Y2J4 779 aa22.36■■□□□ 1.17
SSBP3-205ENST00000417664 ANKRD26Q9UPS8 1709 aa22.35■■□□□ 1.17
SSBP3-205ENST00000417664 CPSF1Q10570 1443 aaKnown RBP22.35■■□□□ 1.17
SSBP3-205ENST00000417664 NUDT16Q96DE0 195 aaKnown RBP22.34■■□□□ 1.17
SSBP3-205ENST00000417664 PPIP5K1Q6PFW1 1433 aa22.34■■□□□ 1.17
SSBP3-205ENST00000417664 FKBP8Q14318 412 aa22.33■■□□□ 1.17
SSBP3-205ENST00000417664 NGEFQ8N5V2 710 aa22.33■■□□□ 1.17
SSBP3-205ENST00000417664 CFAP53Q96M91 514 aa22.33■■□□□ 1.17
SSBP3-205ENST00000417664 FYB1O15117 783 aa22.33■■□□□ 1.16
SSBP3-205ENST00000417664 EDC4Q6P2E9 1401 aaKnown RBP22.32■■□□□ 1.16
SSBP3-205ENST00000417664 XRN1Q8IZH2 1706 aaKnown RBP22.31■■□□□ 1.16
SSBP3-205ENST00000417664 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.31■■□□□ 1.16
SSBP3-205ENST00000417664 CDC42BPGQ6DT37 1551 aa22.31■■□□□ 1.16
SSBP3-205ENST00000417664 ZNF692Q9BU19 519 aaPredicted RBP22.31■■□□□ 1.16
SSBP3-205ENST00000417664 ERICH6BQ5W0A0 696 aa22.3■■□□□ 1.16
SSBP3-205ENST00000417664 MTHFSP49914 203 aa22.3■■□□□ 1.16
SSBP3-205ENST00000417664 KIF20BQ96Q89 1820 aa22.29■■□□□ 1.16
SSBP3-205ENST00000417664 TNNT2P45379 298 aaPredicted RBP22.27■■□□□ 1.16
SSBP3-205ENST00000417664 GGNBP2Q9H3C7 697 aa22.27■■□□□ 1.16
SSBP3-205ENST00000417664 PLEKHG3A1L390 1219 aa22.25■■□□□ 1.15
SSBP3-205ENST00000417664 MON2Q7Z3U7 1717 aa22.25■■□□□ 1.15
SSBP3-205ENST00000417664 PRR36Q9H6K5 1346 aa22.25■■□□□ 1.15
SSBP3-205ENST00000417664 SHPRHQ149N8 1683 aa22.24■■□□□ 1.15
SSBP3-205ENST00000417664 TOPAZ1Q8N9V7 1692 aa22.24■■□□□ 1.15
SSBP3-205ENST00000417664 AKAP12Q02952 1782 aa22.24■■□□□ 1.15
SSBP3-205ENST00000417664 ITSN1Q15811 1721 aa22.23■■□□□ 1.15
SSBP3-205ENST00000417664 RNF123Q5XPI4 1314 aa22.22■■□□□ 1.15
SSBP3-205ENST00000417664 SALL2Q9Y467 1007 aaPredicted RBP22.2■■□□□ 1.15
SSBP3-205ENST00000417664 CHD2O14647 1828 aaKnown RBP22.2■■□□□ 1.14
SSBP3-205ENST00000417664 ZNF521Q96K83 1311 aa22.2■■□□□ 1.14
SSBP3-205ENST00000417664 KCNA6P17658 529 aa22.2■■□□□ 1.14
SSBP3-205ENST00000417664 NCBP3Q53F19 620 aaKnown RBP22.2■■□□□ 1.14
SSBP3-205ENST00000417664 NPHP4O75161 1426 aaPredicted RBP22.19■■□□□ 1.14
SSBP3-205ENST00000417664 ANKARQ7Z5J8 1434 aa22.19■■□□□ 1.14
SSBP3-205ENST00000417664 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.19■■□□□ 1.14
SSBP3-205ENST00000417664 PNPLA6Q8IY17 1366 aa22.18■■□□□ 1.14
SSBP3-205ENST00000417664 SENP3-EIF4A1A0A087X0R7 540 aa22.17■■□□□ 1.14
SSBP3-205ENST00000417664 RUNDC1Q96C34 613 aa22.17■■□□□ 1.14
SSBP3-205ENST00000417664 AATKQ6ZMQ8 1374 aa22.17■■□□□ 1.14
SSBP3-205ENST00000417664 PELP1Q8IZL8 1130 aaKnown RBP22.17■■□□□ 1.14
SSBP3-205ENST00000417664 APAF1O14727 1248 aa22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms