RNA–Protein interactions for RNA: ENST00000417508.1

VPS16-204, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 819 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-204ENST00000417508 NUTM2BA6NNL0 878 aaPredicted RBP27.11■■□□□ 1.93
VPS16-204ENST00000417508 NUTM2EB1AL46 878 aaPredicted RBP27.11■■□□□ 1.93
VPS16-204ENST00000417508 NUTM2AQ8IVF1 878 aaPredicted RBP27.11■■□□□ 1.93
VPS16-204ENST00000417508 LAMC1P11047 1609 aa27.11■■□□□ 1.93
VPS16-204ENST00000417508 WAPLQ7Z5K2 1190 aa27.1■■□□□ 1.93
VPS16-204ENST00000417508 SOS2Q07890 1332 aaPredicted RBP27.1■■□□□ 1.93
VPS16-204ENST00000417508 MYOM2P54296 1465 aa27.09■■□□□ 1.93
VPS16-204ENST00000417508 NRXN1Q9ULB1 1477 aa27.09■■□□□ 1.93
VPS16-204ENST00000417508 CDC42BPGQ6DT37 1551 aa27.09■■□□□ 1.93
VPS16-204ENST00000417508 YTHDC2Q9H6S0 1430 aaKnown RBP27.08■■□□□ 1.93
VPS16-204ENST00000417508 STAC3Q96MF2 364 aa27.08■■□□□ 1.93
VPS16-204ENST00000417508 DHX57Q6P158 1386 aaKnown RBP27.08■■□□□ 1.93
VPS16-204ENST00000417508 PNPLA6Q8IY17 1366 aa27.08■■□□□ 1.93
VPS16-204ENST00000417508 KNDC1Q76NI1 1749 aa27.07■■□□□ 1.92
VPS16-204ENST00000417508 ESCO1Q5FWF5 840 aa27.06■■□□□ 1.92
VPS16-204ENST00000417508 CFAP70Q5T0N1 1121 aa27.05■■□□□ 1.92
VPS16-204ENST00000417508 NPHP3Q7Z494 1330 aa27.03■■□□□ 1.92
VPS16-204ENST00000417508 PLEKHH1Q9ULM0 1364 aa27■■□□□ 1.91
VPS16-204ENST00000417508 AFF2P51816 1311 aa26.99■■□□□ 1.91
VPS16-204ENST00000417508 RXRBP28702 533 aa26.99■■□□□ 1.91
VPS16-204ENST00000417508 FOXO3O43524 673 aa26.97■■□□□ 1.91
VPS16-204ENST00000417508 DCAF11Q8TEB1 546 aa26.96■■□□□ 1.91
VPS16-204ENST00000417508 C8orf37Q96NL8 207 aa26.96■■□□□ 1.91
VPS16-204ENST00000417508 NUTM2FA1L443 756 aa26.94■■□□□ 1.9
VPS16-204ENST00000417508 KDM2AQ9Y2K7 1162 aa26.94■■□□□ 1.9
VPS16-204ENST00000417508 NGLY1Q96IV0 654 aa26.93■■□□□ 1.9
VPS16-204ENST00000417508 PRAM1Q96QH2 718 aa26.92■■□□□ 1.9
VPS16-204ENST00000417508 POGKQ9P215 609 aa26.92■■□□□ 1.9
VPS16-204ENST00000417508 FMN2Q9NZ56 1722 aa26.92■■□□□ 1.9
VPS16-204ENST00000417508 DLC1Q96QB1 1528 aa26.91■■□□□ 1.9
VPS16-204ENST00000417508 ADAMTS2O95450 1211 aa26.91■■□□□ 1.9
VPS16-204ENST00000417508 QTRT2Q9H974 415 aaKnown RBP26.91■■□□□ 1.9
VPS16-204ENST00000417508 PXDNQ92626 1479 aa26.91■■□□□ 1.9
VPS16-204ENST00000417508 CDK12Q9NYV4 1490 aaPredicted RBP26.9■■□□□ 1.9
VPS16-204ENST00000417508 COL22A1Q8NFW1 1626 aaPredicted RBP26.89■■□□□ 1.9
VPS16-204ENST00000417508 KIF1AQ12756 1690 aa26.87■■□□□ 1.89
VPS16-204ENST00000417508 RBM6P78332 1123 aaKnown RBP26.87■■□□□ 1.89
VPS16-204ENST00000417508 ADGRB1O14514 1584 aa26.87■■□□□ 1.89
VPS16-204ENST00000417508 XPCQ01831 940 aaPredicted RBP26.86■■□□□ 1.89
VPS16-204ENST00000417508 SAFB2Q14151 953 aaKnown RBP eCLIP26.86■■□□□ 1.89
VPS16-204ENST00000417508 PHF8Q9UPP1 1060 aa26.86■■□□□ 1.89
VPS16-204ENST00000417508 FNBP4Q8N3X1 1017 aaPredicted RBP26.85■■□□□ 1.89
VPS16-204ENST00000417508 TRAK1Q9UPV9 953 aa26.85■■□□□ 1.89
VPS16-204ENST00000417508 PSME1Q06323 249 aa26.84■■□□□ 1.89
VPS16-204ENST00000417508 KRT28Q7Z3Y7 464 aa26.84■■□□□ 1.89
VPS16-204ENST00000417508 SPATA31A3Q5VYP0 1347 aa26.83■■□□□ 1.89
VPS16-204ENST00000417508 USP21Q9UK80 565 aa26.82■■□□□ 1.88
VPS16-204ENST00000417508 RGPD8O14715 1765 aaPredicted RBP26.81■■□□□ 1.88
VPS16-204ENST00000417508 ANKARQ7Z5J8 1434 aa26.81■■□□□ 1.88
VPS16-204ENST00000417508 TRPC5Q9UL62 973 aaPredicted RBP26.8■■□□□ 1.88
VPS16-204ENST00000417508 EIF3AQ14152 1382 aaKnown RBP26.78■■□□□ 1.88
VPS16-204ENST00000417508 ADGRB2O60241 1585 aa26.77■■□□□ 1.88
VPS16-204ENST00000417508 UPF1Q92900 1129 aaKnown RBP eCLIP26.76■■□□□ 1.87
VPS16-204ENST00000417508 SBNO1A3KN83 1393 aa26.75■■□□□ 1.87
VPS16-204ENST00000417508 MARF1Q9Y4F3 1742 aaKnown RBP26.74■■□□□ 1.87
VPS16-204ENST00000417508 MINK1Q8N4C8 1332 aaPredicted RBP26.74■■□□□ 1.87
VPS16-204ENST00000417508 WASLO00401 505 aaPredicted RBP26.74■■□□□ 1.87
VPS16-204ENST00000417508 HIRIP3Q9BW71 556 aaPredicted RBP26.73■■□□□ 1.87
VPS16-204ENST00000417508 TNS3Q68CZ2 1445 aa26.72■■□□□ 1.87
VPS16-204ENST00000417508 ATRNO75882 1429 aa26.71■■□□□ 1.87
VPS16-204ENST00000417508 PMFBP1Q8TBY8 1022 aa26.7■■□□□ 1.86
VPS16-204ENST00000417508 ARHGEF10O15013 1369 aa26.7■■□□□ 1.86
VPS16-204ENST00000417508 BCL9LQ86UU0 1499 aa26.69■■□□□ 1.86
VPS16-204ENST00000417508 RGS12O14924 1447 aa26.69■■□□□ 1.86
VPS16-204ENST00000417508 USP32Q8NFA0 1604 aa26.68■■□□□ 1.86
VPS16-204ENST00000417508 KIAA1210Q9ULL0 1709 aa26.68■■□□□ 1.86
VPS16-204ENST00000417508 HAP1P54257 671 aaPredicted RBP26.67■■□□□ 1.86
VPS16-204ENST00000417508 GPRASP1Q5JY77 1395 aa26.67■■□□□ 1.86
VPS16-204ENST00000417508 TULP4Q9NRJ4 1543 aa26.66■■□□□ 1.86
VPS16-204ENST00000417508 LMOD2Q6P5Q4 547 aa26.65■■□□□ 1.86
VPS16-204ENST00000417508 UNC5CLQ8IV45 518 aa26.65■■□□□ 1.86
VPS16-204ENST00000417508 PRR36Q9H6K5 1346 aa26.65■■□□□ 1.86
VPS16-204ENST00000417508 GJD4Q96KN9 370 aaPredicted RBP26.64■■□□□ 1.86
VPS16-204ENST00000417508 ARHGEF28Q8N1W1 1705 aaKnown RBP26.64■■□□□ 1.85
VPS16-204ENST00000417508 SLIT2O94813 1529 aa26.62■■□□□ 1.85
VPS16-204ENST00000417508 NGDNQ8NEJ9 315 aaKnown RBP26.62■■□□□ 1.85
VPS16-204ENST00000417508 CABLES1Q8TDN4 633 aa26.61■■□□□ 1.85
VPS16-204ENST00000417508 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.6■■□□□ 1.85
VPS16-204ENST00000417508 NUDT16Q96DE0 195 aaKnown RBP26.6■■□□□ 1.85
VPS16-204ENST00000417508 NBPF1Q3BBV0 1214 aa26.59■■□□□ 1.85
VPS16-204ENST00000417508 CDK19Q9BWU1 502 aa26.59■■□□□ 1.85
VPS16-204ENST00000417508 ATAD2Q6PL18 1390 aa26.58■■□□□ 1.85
VPS16-204ENST00000417508 TRPM3Q9HCF6 1732 aaPredicted RBP26.56■■□□□ 1.84
VPS16-204ENST00000417508 L3MBTL2Q969R5 705 aa26.55■■□□□ 1.84
VPS16-204ENST00000417508 ITSN1Q15811 1721 aa26.55■■□□□ 1.84
VPS16-204ENST00000417508 CCDC61Q9Y6R9 512 aa26.54■■□□□ 1.84
VPS16-204ENST00000417508 VPS72Q15906 364 aa26.53■■□□□ 1.84
VPS16-204ENST00000417508 ATP7BP35670 1465 aa26.53■■□□□ 1.84
VPS16-204ENST00000417508 FAM83GA6ND36 823 aa26.52■■□□□ 1.84
VPS16-204ENST00000417508 PAK3O75914 559 aaPredicted RBP26.52■■□□□ 1.84
VPS16-204ENST00000417508 PLEKHG5O94827 1062 aa26.52■■□□□ 1.84
VPS16-204ENST00000417508 ALS2Q96Q42 1657 aa26.52■■□□□ 1.84
VPS16-204ENST00000417508 NWD2Q9ULI1 1742 aa26.51■■□□□ 1.83
VPS16-204ENST00000417508 PLEKHG3A1L390 1219 aa26.51■■□□□ 1.83
VPS16-204ENST00000417508 ABCA3Q99758 1704 aa26.51■■□□□ 1.83
VPS16-204ENST00000417508 RALGAPBQ86X10 1494 aa26.5■■□□□ 1.83
VPS16-204ENST00000417508 CENPJQ9HC77 1338 aaPredicted RBP26.5■■□□□ 1.83
VPS16-204ENST00000417508 CCDC125Q86Z20 511 aa26.5■■□□□ 1.83
VPS16-204ENST00000417508 SIN3AQ96ST3 1273 aa26.5■■□□□ 1.83
VPS16-204ENST00000417508 POLR3AO14802 1390 aaPredicted RBP26.48■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms