RNA–Protein interactions for RNA: ENST00000417122.6

ITGB1-204, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-204ENST00000417122 PLEKHH1Q9ULM0 1364 aa22.8■■□□□ 1.24
ITGB1-204ENST00000417122 SHPRHQ149N8 1683 aa22.79■■□□□ 1.24
ITGB1-204ENST00000417122 SIRT1Q96EB6 747 aa22.78■■□□□ 1.24
ITGB1-204ENST00000417122 DDX17Q92841 729 aaKnown RBP22.77■■□□□ 1.24
ITGB1-204ENST00000417122 ORAI2Q96SN7 254 aa22.77■■□□□ 1.24
ITGB1-204ENST00000417122 SPATA31A6Q5VVP1 1343 aa22.77■■□□□ 1.24
ITGB1-204ENST00000417122 SOCS7O14512 581 aa22.75■■□□□ 1.23
ITGB1-204ENST00000417122 RGS17Q9UGC6 210 aaPredicted RBP22.75■■□□□ 1.23
ITGB1-204ENST00000417122 ADGRB1O14514 1584 aa22.75■■□□□ 1.23
ITGB1-204ENST00000417122 LRRC59Q96AG4 307 aaKnown RBP22.74■■□□□ 1.23
ITGB1-204ENST00000417122 DLC1Q96QB1 1528 aa22.72■■□□□ 1.23
ITGB1-204ENST00000417122 ESCO1Q5FWF5 840 aa22.71■■□□□ 1.23
ITGB1-204ENST00000417122 PRAM1Q96QH2 718 aa22.71■■□□□ 1.23
ITGB1-204ENST00000417122 LRP6O75581 1613 aa22.71■■□□□ 1.23
ITGB1-204ENST00000417122 FMN2Q9NZ56 1722 aa22.71■■□□□ 1.23
ITGB1-204ENST00000417122 NUTM2FA1L443 756 aa22.7■■□□□ 1.22
ITGB1-204ENST00000417122 SAFB2Q14151 953 aaKnown RBP eCLIP22.69■■□□□ 1.22
ITGB1-204ENST00000417122 POGKQ9P215 609 aa22.69■■□□□ 1.22
ITGB1-204ENST00000417122 TRAK1Q9UPV9 953 aa22.69■■□□□ 1.22
ITGB1-204ENST00000417122 SOS2Q07890 1332 aaPredicted RBP22.68■■□□□ 1.22
ITGB1-204ENST00000417122 MEX3CQ5U5Q3 659 aaKnown RBP22.67■■□□□ 1.22
ITGB1-204ENST00000417122 NUTM2BA6NNL0 878 aaPredicted RBP22.66■■□□□ 1.22
ITGB1-204ENST00000417122 NUTM2EB1AL46 878 aaPredicted RBP22.66■■□□□ 1.22
ITGB1-204ENST00000417122 NUTM2AQ8IVF1 878 aaPredicted RBP22.66■■□□□ 1.22
ITGB1-204ENST00000417122 PNPLA6Q8IY17 1366 aa22.65■■□□□ 1.22
ITGB1-204ENST00000417122 NPHP3Q7Z494 1330 aa22.65■■□□□ 1.22
ITGB1-204ENST00000417122 RGPD8O14715 1765 aaPredicted RBP22.63■■□□□ 1.21
ITGB1-204ENST00000417122 KIAA1210Q9ULL0 1709 aa22.63■■□□□ 1.21
ITGB1-204ENST00000417122 POTEAQ6S8J7 498 aa22.63■■□□□ 1.21
ITGB1-204ENST00000417122 FOXO3O43524 673 aa22.62■■□□□ 1.21
ITGB1-204ENST00000417122 TRIM26Q12899 539 aaPredicted RBP22.62■■□□□ 1.21
ITGB1-204ENST00000417122 KIF1AQ12756 1690 aa22.62■■□□□ 1.21
ITGB1-204ENST00000417122 ADGRB2O60241 1585 aa22.61■■□□□ 1.21
ITGB1-204ENST00000417122 SIN3AQ96ST3 1273 aa22.61■■□□□ 1.21
ITGB1-204ENST00000417122 PXDNQ92626 1479 aa22.6■■□□□ 1.21
ITGB1-204ENST00000417122 ARHGEF28Q8N1W1 1705 aaKnown RBP22.6■■□□□ 1.21
ITGB1-204ENST00000417122 XPCQ01831 940 aaPredicted RBP22.58■■□□□ 1.21
ITGB1-204ENST00000417122 HIRIP3Q9BW71 556 aaPredicted RBP22.58■■□□□ 1.21
ITGB1-204ENST00000417122 MINK1Q8N4C8 1332 aaPredicted RBP22.57■■□□□ 1.2
ITGB1-204ENST00000417122 NEUROD1Q13562 356 aa22.57■■□□□ 1.2
ITGB1-204ENST00000417122 L3MBTL2Q969R5 705 aa22.57■■□□□ 1.2
ITGB1-204ENST00000417122 ZNF772Q68DY9 489 aaPredicted RBP22.56■■□□□ 1.2
ITGB1-204ENST00000417122 PHF8Q9UPP1 1060 aa22.56■■□□□ 1.2
ITGB1-204ENST00000417122 USP32Q8NFA0 1604 aa22.56■■□□□ 1.2
ITGB1-204ENST00000417122 COL22A1Q8NFW1 1626 aaPredicted RBP22.56■■□□□ 1.2
ITGB1-204ENST00000417122 NBPF1Q3BBV0 1214 aa22.55■■□□□ 1.2
ITGB1-204ENST00000417122 ANKARQ7Z5J8 1434 aa22.55■■□□□ 1.2
ITGB1-204ENST00000417122 EIF3AQ14152 1382 aaKnown RBP22.52■■□□□ 1.2
ITGB1-204ENST00000417122 WASLO00401 505 aaPredicted RBP22.52■■□□□ 1.2
ITGB1-204ENST00000417122 KRT28Q7Z3Y7 464 aa22.52■■□□□ 1.2
ITGB1-204ENST00000417122 C8orf37Q96NL8 207 aa22.52■■□□□ 1.2
ITGB1-204ENST00000417122 ADAMTS2O95450 1211 aa22.51■■□□□ 1.19
ITGB1-204ENST00000417122 AFF2P51816 1311 aa22.51■■□□□ 1.19
ITGB1-204ENST00000417122 TULP4Q9NRJ4 1543 aa22.51■■□□□ 1.19
ITGB1-204ENST00000417122 PMFBP1Q8TBY8 1022 aa22.49■■□□□ 1.19
ITGB1-204ENST00000417122 SPATA31A3Q5VYP0 1347 aa22.49■■□□□ 1.19
ITGB1-204ENST00000417122 PSME1Q06323 249 aa22.48■■□□□ 1.19
ITGB1-204ENST00000417122 PRR36Q9H6K5 1346 aa22.48■■□□□ 1.19
ITGB1-204ENST00000417122 NGLY1Q96IV0 654 aa22.47■■□□□ 1.19
ITGB1-204ENST00000417122 TRPM1Q7Z4N2 1603 aa22.46■■□□□ 1.19
ITGB1-204ENST00000417122 TNS3Q68CZ2 1445 aa22.45■■□□□ 1.18
ITGB1-204ENST00000417122 SBNO1A3KN83 1393 aa22.44■■□□□ 1.18
ITGB1-204ENST00000417122 ITSN1Q15811 1721 aa22.44■■□□□ 1.18
ITGB1-204ENST00000417122 MARF1Q9Y4F3 1742 aaKnown RBP22.44■■□□□ 1.18
ITGB1-204ENST00000417122 CDK19Q9BWU1 502 aa22.43■■□□□ 1.18
ITGB1-204ENST00000417122 RXRBP28702 533 aa22.42■■□□□ 1.18
ITGB1-204ENST00000417122 NUDT16Q96DE0 195 aaKnown RBP22.42■■□□□ 1.18
ITGB1-204ENST00000417122 ATP7BP35670 1465 aa22.41■■□□□ 1.18
ITGB1-204ENST00000417122 CENPJQ9HC77 1338 aaPredicted RBP22.41■■□□□ 1.18
ITGB1-204ENST00000417122 GPRASP1Q5JY77 1395 aa22.4■■□□□ 1.18
ITGB1-204ENST00000417122 LMOD2Q6P5Q4 547 aa22.4■■□□□ 1.18
ITGB1-204ENST00000417122 QTRT2Q9H974 415 aaKnown RBP22.4■■□□□ 1.18
ITGB1-204ENST00000417122 TRPM3Q9HCF6 1732 aaPredicted RBP22.4■■□□□ 1.18
ITGB1-204ENST00000417122 QRICH2Q9H0J4 1663 aa22.39■■□□□ 1.18
ITGB1-204ENST00000417122 ROCK2O75116 1388 aaKnown RBP22.39■■□□□ 1.18
ITGB1-204ENST00000417122 FNBP4Q8N3X1 1017 aaPredicted RBP22.39■■□□□ 1.17
ITGB1-204ENST00000417122 NGDNQ8NEJ9 315 aaKnown RBP22.39■■□□□ 1.17
ITGB1-204ENST00000417122 USP21Q9UK80 565 aa22.39■■□□□ 1.17
ITGB1-204ENST00000417122 ARHGEF10O15013 1369 aa22.38■■□□□ 1.17
ITGB1-204ENST00000417122 TONSLQ96HA7 1378 aa22.38■■□□□ 1.17
ITGB1-204ENST00000417122 NBPF8Q3BBV2 869 aa22.37■■□□□ 1.17
ITGB1-204ENST00000417122 TOPAZ1Q8N9V7 1692 aa22.36■■□□□ 1.17
ITGB1-204ENST00000417122 HAP1P54257 671 aaPredicted RBP22.36■■□□□ 1.17
ITGB1-204ENST00000417122 CDK12Q9NYV4 1490 aaPredicted RBP22.35■■□□□ 1.17
ITGB1-204ENST00000417122 PLEKHG5O94827 1062 aa22.35■■□□□ 1.17
ITGB1-204ENST00000417122 RBM6P78332 1123 aaKnown RBP22.35■■□□□ 1.17
ITGB1-204ENST00000417122 CABLES1Q8TDN4 633 aa22.35■■□□□ 1.17
ITGB1-204ENST00000417122 CCDC61Q9Y6R9 512 aa22.35■■□□□ 1.17
ITGB1-204ENST00000417122 ALS2Q96Q42 1657 aa22.35■■□□□ 1.17
ITGB1-204ENST00000417122 ABCA3Q99758 1704 aa22.34■■□□□ 1.17
ITGB1-204ENST00000417122 TRPC5Q9UL62 973 aaPredicted RBP22.34■■□□□ 1.17
ITGB1-204ENST00000417122 SRPK2P78362 688 aaKnown RBP22.33■■□□□ 1.17
ITGB1-204ENST00000417122 BCL9LQ86UU0 1499 aa22.32■■□□□ 1.16
ITGB1-204ENST00000417122 PAK3O75914 559 aaPredicted RBP22.31■■□□□ 1.16
ITGB1-204ENST00000417122 CABP2Q9NPB3 220 aa22.31■■□□□ 1.16
ITGB1-204ENST00000417122 ATRNO75882 1429 aa22.31■■□□□ 1.16
ITGB1-204ENST00000417122 POLR3AO14802 1390 aaPredicted RBP22.3■■□□□ 1.16
ITGB1-204ENST00000417122 PLEKHG3A1L390 1219 aa22.3■■□□□ 1.16
ITGB1-204ENST00000417122 ACEP12821 1306 aa22.3■■□□□ 1.16
ITGB1-204ENST00000417122 SLIT2O94813 1529 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms