RNA–Protein interactions for RNA: ENST00000416283.6

PHTF2-205, Transcript of putative homeodomain transcription factor 2, humanhuman

TSL 5 BASIC

Gene PHTF2, Length 5,198 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2-205ENST00000416283 ABCC5O15440 1437 aa12.17□□□□□ -0.46
PHTF2-205ENST00000416283 STK31Q9BXU1 1019 aa12.17□□□□□ -0.46
PHTF2-205ENST00000416283 CCDC39Q9UFE4 941 aa12.17□□□□□ -0.46
PHTF2-205ENST00000416283 CCDC27Q2M243 656 aa12.16□□□□□ -0.46
PHTF2-205ENST00000416283 ZHX1Q9UKY1 873 aaPredicted RBP12.16□□□□□ -0.46
PHTF2-205ENST00000416283 SSH1Q8WYL5 1049 aa12.16□□□□□ -0.46
PHTF2-205ENST00000416283 PDCL3Q9H2J4 239 aa12.16□□□□□ -0.46
PHTF2-205ENST00000416283 EHBP1L1Q8N3D4 1523 aa12.16□□□□□ -0.46
PHTF2-205ENST00000416283 VPS37CA5D8V6 355 aaPredicted RBP12.16□□□□□ -0.46
PHTF2-205ENST00000416283 MLECQ14165 292 aa12.16□□□□□ -0.46
PHTF2-205ENST00000416283 SPC24Q8NBT2 197 aa12.16□□□□□ -0.46
PHTF2-205ENST00000416283 DISP3Q9P2K9 1392 aa12.15□□□□□ -0.46
PHTF2-205ENST00000416283 PLEKHH1Q9ULM0 1364 aa12.15□□□□□ -0.46
PHTF2-205ENST00000416283 RBM42Q9BTD8 480 aaKnown RBP12.15□□□□□ -0.46
PHTF2-205ENST00000416283 RLBP1P12271 317 aa12.15□□□□□ -0.46
PHTF2-205ENST00000416283 TNNT3P45378 269 aaPredicted RBP12.15□□□□□ -0.46
PHTF2-205ENST00000416283 AFAP1Q8N556 730 aa12.15□□□□□ -0.47
PHTF2-205ENST00000416283 THUMPD2Q9BTF0 503 aaKnown RBP12.14□□□□□ -0.47
PHTF2-205ENST00000416283 EFCAB5A4FU69 1503 aa12.14□□□□□ -0.47
PHTF2-205ENST00000416283 MAPK8IP2Q13387 824 aaPredicted RBP12.14□□□□□ -0.47
PHTF2-205ENST00000416283 IFT57Q9NWB7 429 aa12.14□□□□□ -0.47
PHTF2-205ENST00000416283 EVC2Q86UK5 1308 aa12.14□□□□□ -0.47
PHTF2-205ENST00000416283 NKTRP30414 1462 aaKnown RBP12.14□□□□□ -0.47
PHTF2-205ENST00000416283 LMOD2Q6P5Q4 547 aa12.13□□□□□ -0.47
PHTF2-205ENST00000416283 CIZ1Q9ULV3 898 aaPredicted RBP12.13□□□□□ -0.47
PHTF2-205ENST00000416283 NPHP1O15259 732 aa12.13□□□□□ -0.47
PHTF2-205ENST00000416283 FIBPO43427 364 aa12.13□□□□□ -0.47
PHTF2-205ENST00000416283 RABEP1Q15276 862 aa12.13□□□□□ -0.47
PHTF2-205ENST00000416283 PRDM2Q13029 1718 aa12.13□□□□□ -0.47
PHTF2-205ENST00000416283 PER1O15534 1290 aaPredicted RBP12.13□□□□□ -0.47
PHTF2-205ENST00000416283 FBXW7Q969H0 707 aa12.13□□□□□ -0.47
PHTF2-205ENST00000416283 API5Q9BZZ5 524 aaKnown RBP12.13□□□□□ -0.47
PHTF2-205ENST00000416283 CBX1P83916 185 aa12.13□□□□□ -0.47
PHTF2-205ENST00000416283 WDR63Q8IWG1 891 aa12.13□□□□□ -0.47
PHTF2-205ENST00000416283 PRKAR2BP31323 418 aa12.12□□□□□ -0.47
PHTF2-205ENST00000416283 RBM27Q9P2N5 1060 aaKnown RBP12.12□□□□□ -0.47
PHTF2-205ENST00000416283 C9orf84Q5VXU9 1444 aa12.12□□□□□ -0.47
PHTF2-205ENST00000416283 TRIM27P14373 513 aa12.12□□□□□ -0.47
PHTF2-205ENST00000416283 SUPT6HQ7KZ85 1726 aaKnown RBP12.12□□□□□ -0.47
PHTF2-205ENST00000416283 KDM2BQ8NHM5 1336 aa12.12□□□□□ -0.47
PHTF2-205ENST00000416283 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.11□□□□□ -0.47
PHTF2-205ENST00000416283 TSPY26PQ9H489 355 aa12.11□□□□□ -0.47
PHTF2-205ENST00000416283 EPRSP07814 1512 aaKnown RBP12.11□□□□□ -0.47
PHTF2-205ENST00000416283 DMRT2Q9Y5R5 561 aa12.11□□□□□ -0.47
PHTF2-205ENST00000416283 POLA1P09884 1462 aaPredicted RBP12.11□□□□□ -0.47
PHTF2-205ENST00000416283 ROCK1Q13464 1354 aa12.11□□□□□ -0.47
PHTF2-205ENST00000416283 GDPD2Q9HCC8 539 aa12.11□□□□□ -0.47
PHTF2-205ENST00000416283 NESP48681 1621 aa12.11□□□□□ -0.47
PHTF2-205ENST00000416283 MTERF4Q7Z6M4 381 aaKnown RBP12.11□□□□□ -0.47
PHTF2-205ENST00000416283 MBD3O95983 291 aa12.1□□□□□ -0.47
PHTF2-205ENST00000416283 LTV1Q96GA3 475 aaPredicted RBP12.1□□□□□ -0.47
PHTF2-205ENST00000416283 BECN2A8MW95 431 aa12.1□□□□□ -0.47
PHTF2-205ENST00000416283 BAG4O95429 457 aaKnown RBP12.1□□□□□ -0.47
PHTF2-205ENST00000416283 CCDC9Q9Y3X0 531 aaKnown RBP12.1□□□□□ -0.47
PHTF2-205ENST00000416283 HSP90B1P14625 803 aaKnown RBP12.09□□□□□ -0.47
PHTF2-205ENST00000416283 SMC3Q9UQE7 1217 aa12.09□□□□□ -0.47
PHTF2-205ENST00000416283 GOLGA6L19H0YKK7 550 aa12.09□□□□□ -0.47
PHTF2-205ENST00000416283 LMOD3Q0VAK6 560 aa12.09□□□□□ -0.47
PHTF2-205ENST00000416283 ERCC6Q03468 1493 aa12.09□□□□□ -0.47
PHTF2-205ENST00000416283 PARD3Q8TEW0 1356 aa12.09□□□□□ -0.47
PHTF2-205ENST00000416283 GCC1Q96CN9 775 aa12.09□□□□□ -0.47
PHTF2-205ENST00000416283 UPF3BQ9BZI7 483 aaKnown RBP12.09□□□□□ -0.47
PHTF2-205ENST00000416283 ATP6V1DQ9Y5K8 247 aa12.09□□□□□ -0.47
PHTF2-205ENST00000416283 TWISTNBQ3B726 338 aaPredicted RBP12.08□□□□□ -0.48
PHTF2-205ENST00000416283 TMPOP42166 694 aaKnown RBP12.08□□□□□ -0.48
PHTF2-205ENST00000416283 GNAI1P63096 354 aa12.08□□□□□ -0.48
PHTF2-205ENST00000416283 BICD2Q8TD16 824 aa12.08□□□□□ -0.48
PHTF2-205ENST00000416283 PTPRGP23470 1445 aa12.08□□□□□ -0.48
PHTF2-205ENST00000416283 FKBP5Q13451 457 aaPredicted RBP12.07□□□□□ -0.48
PHTF2-205ENST00000416283 DIAPH3Q9NSV4 1193 aa12.07□□□□□ -0.48
PHTF2-205ENST00000416283 SMARCA5O60264 1052 aaPredicted RBP12.07□□□□□ -0.48
PHTF2-205ENST00000416283 FOSBP53539 338 aa12.07□□□□□ -0.48
PHTF2-205ENST00000416283 CCAR2Q8N163 923 aaKnown RBP12.07□□□□□ -0.48
PHTF2-205ENST00000416283 ZNF830Q96NB3 372 aaPredicted RBP12.07□□□□□ -0.48
PHTF2-205ENST00000416283 HMGN5P82970 282 aaKnown RBP12.07□□□□□ -0.48
PHTF2-205ENST00000416283 TBC1D9Q6ZT07 1266 aa12.07□□□□□ -0.48
PHTF2-205ENST00000416283 TESK2Q96S53 571 aa12.06□□□□□ -0.48
PHTF2-205ENST00000416283 TRIM5Q9C035 493 aa12.06□□□□□ -0.48
PHTF2-205ENST00000416283 USP25Q9UHP3 1055 aa12.06□□□□□ -0.48
PHTF2-205ENST00000416283 NINLQ9Y2I6 1382 aa12.06□□□□□ -0.48
PHTF2-205ENST00000416283 TROQ12816 1431 aaPredicted RBP12.05□□□□□ -0.48
PHTF2-205ENST00000416283 IGSF3O75054 1194 aa12.05□□□□□ -0.48
PHTF2-205ENST00000416283 EIF2S2P20042 333 aaKnown RBP12.05□□□□□ -0.48
PHTF2-205ENST00000416283 LARP6Q9BRS8 491 aaKnown RBP12.05□□□□□ -0.48
PHTF2-205ENST00000416283 SPDYE4A6NLX3 237 aa12.05□□□□□ -0.48
PHTF2-205ENST00000416283 GAS2L2Q8NHY3 880 aa12.05□□□□□ -0.48
PHTF2-205ENST00000416283 A0A0G2JS52 829 aa12.05□□□□□ -0.48
PHTF2-205ENST00000416283 H3BQV1 296 aa12.05□□□□□ -0.48
PHTF2-205ENST00000416283 IFFO2Q5TF58 517 aa12.05□□□□□ -0.48
PHTF2-205ENST00000416283 CWC22Q9HCG8 908 aaKnown RBP12.05□□□□□ -0.48
PHTF2-205ENST00000416283 FAM177BA6PVY3 158 aa12.04□□□□□ -0.48
PHTF2-205ENST00000416283 VGFO15240 615 aaPredicted RBP12.04□□□□□ -0.48
PHTF2-205ENST00000416283 KLHL40Q2TBA0 621 aa12.04□□□□□ -0.48
PHTF2-205ENST00000416283 ZNF428Q96B54 188 aa12.04□□□□□ -0.48
PHTF2-205ENST00000416283 MAP4K4O95819 1239 aaPredicted RBP12.04□□□□□ -0.48
PHTF2-205ENST00000416283 KIF3AQ9Y496 699 aa12.04□□□□□ -0.48
PHTF2-205ENST00000416283 PRIM1P49642 420 aaKnown RBP12.04□□□□□ -0.48
PHTF2-205ENST00000416283 TOPBP1Q92547 1522 aa12.03□□□□□ -0.48
PHTF2-205ENST00000416283 ERC2O15083 957 aa12.03□□□□□ -0.48
PHTF2-205ENST00000416283 SF3A1Q15459 793 aaKnown RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms