RNA–Protein interactions for RNA: ENST00000415758.1

DDX56-202, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,287 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-202ENST00000415758 TRPC5Q9UL62 973 aaPredicted RBP23.24■■□□□ 1.31
DDX56-202ENST00000415758 CDC42BPGQ6DT37 1551 aa23.21■■□□□ 1.31
DDX56-202ENST00000415758 NPHP3Q7Z494 1330 aa23.2■■□□□ 1.3
DDX56-202ENST00000415758 MYOM2P54296 1465 aa23.19■■□□□ 1.3
DDX56-202ENST00000415758 ATAD2Q6PL18 1390 aa23.19■■□□□ 1.3
DDX56-202ENST00000415758 ATRNO75882 1429 aa23.18■■□□□ 1.3
DDX56-202ENST00000415758 ESCO1Q5FWF5 840 aa23.18■■□□□ 1.3
DDX56-202ENST00000415758 PXDNQ92626 1479 aa23.17■■□□□ 1.3
DDX56-202ENST00000415758 TECPR2O15040 1411 aa23.16■■□□□ 1.3
DDX56-202ENST00000415758 ADGRF5Q8IZF2 1346 aa23.15■■□□□ 1.3
DDX56-202ENST00000415758 BCL9LQ86UU0 1499 aa23.15■■□□□ 1.3
DDX56-202ENST00000415758 FOXO3O43524 673 aa23.14■■□□□ 1.29
DDX56-202ENST00000415758 LRPPRCP42704 1394 aaKnown RBP23.14■■□□□ 1.29
DDX56-202ENST00000415758 MARF1Q9Y4F3 1742 aaKnown RBP23.13■■□□□ 1.29
DDX56-202ENST00000415758 ABCC11Q96J66 1382 aa23.13■■□□□ 1.29
DDX56-202ENST00000415758 FOXD1Q16676 465 aa23.12■■□□□ 1.29
DDX56-202ENST00000415758 SPATA31E1Q6ZUB1 1445 aa23.12■■□□□ 1.29
DDX56-202ENST00000415758 ANKRD30BQ9BXX2 1392 aa23.12■■□□□ 1.29
DDX56-202ENST00000415758 SRCAPQ6ZRS2 3230 aa23.11■■□□□ 1.29
DDX56-202ENST00000415758 CCDC144AA2RUR9 1427 aa23.11■■□□□ 1.29
DDX56-202ENST00000415758 WAPLQ7Z5K2 1190 aa23.11■■□□□ 1.29
DDX56-202ENST00000415758 IFT172Q9UG01 1749 aa23.09■■□□□ 1.29
DDX56-202ENST00000415758 CCDC125Q86Z20 511 aa23.09■■□□□ 1.29
DDX56-202ENST00000415758 STK26Q9P289 416 aa23.09■■□□□ 1.29
DDX56-202ENST00000415758 KNDC1Q76NI1 1749 aa23.08■■□□□ 1.29
DDX56-202ENST00000415758 EP400Q96L91 3159 aa23.08■■□□□ 1.29
DDX56-202ENST00000415758 XPCQ01831 940 aaPredicted RBP23.08■■□□□ 1.29
DDX56-202ENST00000415758 RGL3Q3MIN7 710 aa23.08■■□□□ 1.29
DDX56-202ENST00000415758 GJD4Q96KN9 370 aaPredicted RBP23.08■■□□□ 1.29
DDX56-202ENST00000415758 SIRT1Q96EB6 747 aa23.06■■□□□ 1.28
DDX56-202ENST00000415758 PIK3C2GO75747 1445 aa23.06■■□□□ 1.28
DDX56-202ENST00000415758 TMEM132EQ6IEE7 984 aa23.05■■□□□ 1.28
DDX56-202ENST00000415758 MPHOSPH9Q99550 1183 aa23.05■■□□□ 1.28
DDX56-202ENST00000415758 SPATA31A3Q5VYP0 1347 aa23.05■■□□□ 1.28
DDX56-202ENST00000415758 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.05■■□□□ 1.28
DDX56-202ENST00000415758 PLEKHH1Q9ULM0 1364 aa23.04■■□□□ 1.28
DDX56-202ENST00000415758 NUTM2FA1L443 756 aa23.04■■□□□ 1.28
DDX56-202ENST00000415758 FMN2Q9NZ56 1722 aa23.04■■□□□ 1.28
DDX56-202ENST00000415758 SLIT2O94813 1529 aa23.03■■□□□ 1.28
DDX56-202ENST00000415758 YTHDC2Q9H6S0 1430 aaKnown RBP23.02■■□□□ 1.28
DDX56-202ENST00000415758 UNC5CLQ8IV45 518 aa23.02■■□□□ 1.28
DDX56-202ENST00000415758 ZRANB1Q9UGI0 708 aa23.02■■□□□ 1.28
DDX56-202ENST00000415758 KIF1AQ12756 1690 aa23.02■■□□□ 1.28
DDX56-202ENST00000415758 KRT28Q7Z3Y7 464 aa22.99■■□□□ 1.27
DDX56-202ENST00000415758 C14orf93Q9H972 538 aaKnown RBP22.99■■□□□ 1.27
DDX56-202ENST00000415758 RALGAPBQ86X10 1494 aa22.98■■□□□ 1.27
DDX56-202ENST00000415758 GLI3P10071 1580 aa22.97■■□□□ 1.27
DDX56-202ENST00000415758 USP32Q8NFA0 1604 aa22.96■■□□□ 1.27
DDX56-202ENST00000415758 RGPD8O14715 1765 aaPredicted RBP22.95■■□□□ 1.26
DDX56-202ENST00000415758 ACIN1Q9UKV3 1341 aaKnown RBP22.95■■□□□ 1.26
DDX56-202ENST00000415758 NRXN1Q9ULB1 1477 aa22.95■■□□□ 1.26
DDX56-202ENST00000415758 PHF8Q9UPP1 1060 aa22.95■■□□□ 1.26
DDX56-202ENST00000415758 PSME1Q06323 249 aa22.94■■□□□ 1.26
DDX56-202ENST00000415758 TNS3Q68CZ2 1445 aa22.93■■□□□ 1.26
DDX56-202ENST00000415758 DHX57Q6P158 1386 aaKnown RBP22.93■■□□□ 1.26
DDX56-202ENST00000415758 BLMP54132 1417 aaPredicted RBP22.92■■□□□ 1.26
DDX56-202ENST00000415758 SBNO1A3KN83 1393 aa22.92■■□□□ 1.26
DDX56-202ENST00000415758 ONECUT3O60422 494 aaPredicted RBP22.91■■□□□ 1.26
DDX56-202ENST00000415758 VPS72Q15906 364 aa22.91■■□□□ 1.26
DDX56-202ENST00000415758 CFAP70Q5T0N1 1121 aa22.91■■□□□ 1.26
DDX56-202ENST00000415758 BRWD3Q6RI45 1802 aa22.9■■□□□ 1.26
DDX56-202ENST00000415758 NWD2Q9ULI1 1742 aa22.89■■□□□ 1.26
DDX56-202ENST00000415758 CABLES1Q8TDN4 633 aa22.88■■□□□ 1.25
DDX56-202ENST00000415758 ARHGEF10O15013 1369 aa22.88■■□□□ 1.25
DDX56-202ENST00000415758 HAP1P54257 671 aaPredicted RBP22.87■■□□□ 1.25
DDX56-202ENST00000415758 SEPT12Q8IYM1 358 aa22.87■■□□□ 1.25
DDX56-202ENST00000415758 PRAM1Q96QH2 718 aa22.87■■□□□ 1.25
DDX56-202ENST00000415758 DLC1Q96QB1 1528 aa22.86■■□□□ 1.25
DDX56-202ENST00000415758 ANKARQ7Z5J8 1434 aa22.85■■□□□ 1.25
DDX56-202ENST00000415758 PLCH1Q4KWH8 1693 aa22.85■■□□□ 1.25
DDX56-202ENST00000415758 ABCA3Q99758 1704 aa22.84■■□□□ 1.25
DDX56-202ENST00000415758 FAM83GA6ND36 823 aa22.83■■□□□ 1.25
DDX56-202ENST00000415758 SAFB2Q14151 953 aaKnown RBP eCLIP22.82■■□□□ 1.24
DDX56-202ENST00000415758 DEFB132Q7Z7B7 95 aa22.82■■□□□ 1.24
DDX56-202ENST00000415758 ADGRB2O60241 1585 aa22.81■■□□□ 1.24
DDX56-202ENST00000415758 SF3B2Q13435 895 aaKnown RBP22.81■■□□□ 1.24
DDX56-202ENST00000415758 LMOD2Q6P5Q4 547 aa22.81■■□□□ 1.24
DDX56-202ENST00000415758 POGKQ9P215 609 aa22.81■■□□□ 1.24
DDX56-202ENST00000415758 KRT27Q7Z3Y8 459 aa22.8■■□□□ 1.24
DDX56-202ENST00000415758 PMFBP1Q8TBY8 1022 aa22.8■■□□□ 1.24
DDX56-202ENST00000415758 CCDC9Q9Y3X0 531 aaKnown RBP22.79■■□□□ 1.24
DDX56-202ENST00000415758 ADGRB1O14514 1584 aa22.79■■□□□ 1.24
DDX56-202ENST00000415758 TRPM3Q9HCF6 1732 aaPredicted RBP22.78■■□□□ 1.24
DDX56-202ENST00000415758 PLEKHG5O94827 1062 aa22.76■■□□□ 1.23
DDX56-202ENST00000415758 ALS2Q96Q42 1657 aa22.75■■□□□ 1.23
DDX56-202ENST00000415758 NRAPQ86VF7 1730 aa22.75■■□□□ 1.23
DDX56-202ENST00000415758 EIF3AQ14152 1382 aaKnown RBP22.75■■□□□ 1.23
DDX56-202ENST00000415758 GPRASP1Q5JY77 1395 aa22.74■■□□□ 1.23
DDX56-202ENST00000415758 BTG4Q9NY30 223 aa22.73■■□□□ 1.23
DDX56-202ENST00000415758 TRAK1Q9UPV9 953 aa22.73■■□□□ 1.23
DDX56-202ENST00000415758 COL14A1Q05707 1796 aaKnown RBP22.72■■□□□ 1.23
DDX56-202ENST00000415758 STAC3Q96MF2 364 aa22.72■■□□□ 1.23
DDX56-202ENST00000415758 HIRIP3Q9BW71 556 aaPredicted RBP22.72■■□□□ 1.23
DDX56-202ENST00000415758 PRR36Q9H6K5 1346 aa22.72■■□□□ 1.23
DDX56-202ENST00000415758 TULP4Q9NRJ4 1543 aa22.72■■□□□ 1.23
DDX56-202ENST00000415758 WASLO00401 505 aaPredicted RBP22.71■■□□□ 1.23
DDX56-202ENST00000415758 FAM98CQ17RN3 349 aaKnown RBP22.7■■□□□ 1.22
DDX56-202ENST00000415758 MINK1Q8N4C8 1332 aaPredicted RBP22.7■■□□□ 1.22
DDX56-202ENST00000415758 LRP5O75197 1615 aa22.69■■□□□ 1.22
DDX56-202ENST00000415758 RAB3GAP2Q9H2M9 1393 aa22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms